RNA–Protein interactions for RNA: ENST00000637692.1

CACNA1A-245, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,245 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-245ENST00000637692 PNMA1Q8ND90 353 aa17.41■□□□□ 0.38
CACNA1A-245ENST00000637692 BRF1Q92994 677 aa17.41■□□□□ 0.38
CACNA1A-245ENST00000637692 WNK4Q96J92 1243 aa17.41■□□□□ 0.38
CACNA1A-245ENST00000637692 TCEANC2Q96MN5 208 aa17.41■□□□□ 0.38
CACNA1A-245ENST00000637692 ABT1Q9ULW3 272 aaKnown RBP17.41■□□□□ 0.38
CACNA1A-245ENST00000637692 SLC12A7Q9Y666 1083 aa17.41■□□□□ 0.38
CACNA1A-245ENST00000637692 ATAD5Q96QE3 1844 aa17.4■□□□□ 0.38
CACNA1A-245ENST00000637692 A0A1W2PRG0 241 aa17.4■□□□□ 0.38
CACNA1A-245ENST00000637692 AK2P54819 239 aa17.4■□□□□ 0.38
CACNA1A-245ENST00000637692 USP17L2Q6R6M4 530 aa17.4■□□□□ 0.38
CACNA1A-245ENST00000637692 CLEC10AQ8IUN9 316 aa17.4■□□□□ 0.38
CACNA1A-245ENST00000637692 ZNF654Q8IZM8 581 aa17.4■□□□□ 0.38
CACNA1A-245ENST00000637692 ACER1Q8TDN7 264 aa17.4■□□□□ 0.38
CACNA1A-245ENST00000637692 CHMP4CQ96CF2 233 aa17.4■□□□□ 0.38
CACNA1A-245ENST00000637692 OTUD5Q96G74 571 aa17.4■□□□□ 0.38
CACNA1A-245ENST00000637692 ZNF274Q96GC6 653 aaPredicted RBP17.4■□□□□ 0.38
CACNA1A-245ENST00000637692 GMCL1Q96IK5 515 aa17.4■□□□□ 0.38
CACNA1A-245ENST00000637692 C12orf42Q96LP6 360 aa17.4■□□□□ 0.38
CACNA1A-245ENST00000637692 LRRC2Q9BYS8 371 aa17.4■□□□□ 0.38
CACNA1A-245ENST00000637692 VCPKMTQ9H867 229 aa17.4■□□□□ 0.38
CACNA1A-245ENST00000637692 RASSF10A6NK89 507 aa17.39■□□□□ 0.37
CACNA1A-245ENST00000637692 ZNF157P51786 506 aaPredicted RBP17.39■□□□□ 0.37
CACNA1A-245ENST00000637692 SNAPC2Q13487 334 aa17.39■□□□□ 0.37
CACNA1A-245ENST00000637692 SPRYD7Q5W111 196 aa17.39■□□□□ 0.37
CACNA1A-245ENST00000637692 APOA5Q6Q788 366 aa17.39■□□□□ 0.37
CACNA1A-245ENST00000637692 LRRC47Q8N1G4 583 aaKnown RBP17.39■□□□□ 0.37
CACNA1A-245ENST00000637692 DCAF4Q8WV16 495 aa17.39■□□□□ 0.37
CACNA1A-245ENST00000637692 SNX21Q969T3 373 aa17.39■□□□□ 0.37
CACNA1A-245ENST00000637692 ZSCAN31Q96LW9 406 aaPredicted RBP17.39■□□□□ 0.37
CACNA1A-245ENST00000637692 GPHNQ9NQX3 736 aaPredicted RBP17.39■□□□□ 0.37
CACNA1A-245ENST00000637692 LIMCH1Q9UPQ0 1083 aa17.39■□□□□ 0.37
CACNA1A-245ENST00000637692 NID2Q14112 1375 aa17.39■□□□□ 0.37
CACNA1A-245ENST00000637692 A0A0G2JLL6 359 aaPredicted RBP17.38■□□□□ 0.37
CACNA1A-245ENST00000637692 KLF18A0A0U1RQI7 1052 aa17.38■□□□□ 0.37
CACNA1A-245ENST00000637692 TRIM75PA6NK02 468 aa17.38■□□□□ 0.37
CACNA1A-245ENST00000637692 F5H6K3 240 aa17.38■□□□□ 0.37
CACNA1A-245ENST00000637692 IRF6O14896 467 aa17.38■□□□□ 0.37
CACNA1A-245ENST00000637692 ZBTB43O43298 467 aa17.38■□□□□ 0.37
CACNA1A-245ENST00000637692 SNHG28P0DPA3 235 aa17.38■□□□□ 0.37
CACNA1A-245ENST00000637692 KIF5BP33176 963 aa17.38■□□□□ 0.37
CACNA1A-245ENST00000637692 ECE1P42892 770 aa17.38■□□□□ 0.37
CACNA1A-245ENST00000637692 GTF2A2P52657 109 aa17.38■□□□□ 0.37
CACNA1A-245ENST00000637692 KLRC3Q07444 240 aa17.38■□□□□ 0.37
CACNA1A-245ENST00000637692 TROAPQ12815 778 aa17.38■□□□□ 0.37
CACNA1A-245ENST00000637692 MTMR2Q13614 643 aa17.38■□□□□ 0.37
CACNA1A-245ENST00000637692 FASTKD5Q7L8L6 764 aaKnown RBP17.38■□□□□ 0.37
CACNA1A-245ENST00000637692 PRRT2Q7Z6L0 340 aaPredicted RBP17.38■□□□□ 0.37
CACNA1A-245ENST00000637692 RASAL3Q86YV0 1011 aa17.38■□□□□ 0.37
CACNA1A-245ENST00000637692 PROCA1Q8NCQ7 364 aaPredicted RBP17.38■□□□□ 0.37
CACNA1A-245ENST00000637692 SH2B1Q9NRF2 756 aaPredicted RBP17.38■□□□□ 0.37
CACNA1A-245ENST00000637692 TMOD4Q9NZQ9 345 aa17.38■□□□□ 0.37
CACNA1A-245ENST00000637692 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.38■□□□□ 0.37
CACNA1A-245ENST00000637692 CCDC196A0A1B0GTZ2 297 aa17.37■□□□□ 0.37
CACNA1A-245ENST00000637692 WDR46O15213 610 aaKnown RBP17.37■□□□□ 0.37
CACNA1A-245ENST00000637692 NDUFB10O96000 172 aa17.37■□□□□ 0.37
CACNA1A-245ENST00000637692 SLC10A3P09131 477 aa17.37■□□□□ 0.37
CACNA1A-245ENST00000637692 CETPP11597 493 aa17.37■□□□□ 0.37
CACNA1A-245ENST00000637692 ASPRV1Q53RT3 343 aa17.37■□□□□ 0.37
CACNA1A-245ENST00000637692 GPATCH4Q5T3I0 446 aaKnown RBP17.37■□□□□ 0.37
CACNA1A-245ENST00000637692 SLFN13Q68D06 897 aa17.37■□□□□ 0.37
CACNA1A-245ENST00000637692 CCDC84Q86UT8 332 aaPredicted RBP17.37■□□□□ 0.37
CACNA1A-245ENST00000637692 CNKSR2Q8WXI2 1034 aa17.37■□□□□ 0.37
CACNA1A-245ENST00000637692 SENP2Q9HC62 589 aa17.37■□□□□ 0.37
CACNA1A-245ENST00000637692 BRPF3Q9ULD4 1205 aa17.37■□□□□ 0.37
CACNA1A-245ENST00000637692 GOLGA8BA8MQT2 603 aa17.36■□□□□ 0.37
CACNA1A-245ENST00000637692 PDHBP11177 359 aa17.36■□□□□ 0.37
CACNA1A-245ENST00000637692 GJA5P36382 358 aa17.36■□□□□ 0.37
CACNA1A-245ENST00000637692 GNAQP50148 359 aa17.36■□□□□ 0.37
CACNA1A-245ENST00000637692 INHBEP58166 350 aa17.36■□□□□ 0.37
CACNA1A-245ENST00000637692 APOBRQ0VD83 1088 aa17.36■□□□□ 0.37
CACNA1A-245ENST00000637692 GRM4Q14833 912 aa17.36■□□□□ 0.37
CACNA1A-245ENST00000637692 CTCFLQ8NI51 663 aaPredicted RBP17.36■□□□□ 0.37
CACNA1A-245ENST00000637692 LZTS2Q9BRK4 669 aa17.36■□□□□ 0.37
CACNA1A-245ENST00000637692 RBM28Q9NW13 759 aaKnown RBP17.36■□□□□ 0.37
CACNA1A-245ENST00000637692 MANSC4A6NHS7 340 aaPredicted RBP17.35■□□□□ 0.37
CACNA1A-245ENST00000637692 DHX16O60231 1041 aaKnown RBP17.35■□□□□ 0.37
CACNA1A-245ENST00000637692 PLA2G6O60733 806 aa17.35■□□□□ 0.37
CACNA1A-245ENST00000637692 PARP1P09874 1014 aaKnown RBP17.35■□□□□ 0.37
CACNA1A-245ENST00000637692 PDIA3P30101 505 aaKnown RBP17.35■□□□□ 0.37
CACNA1A-245ENST00000637692 SLC1A4P43007 532 aa17.35■□□□□ 0.37
CACNA1A-245ENST00000637692 HMGCS2P54868 508 aa17.35■□□□□ 0.37
CACNA1A-245ENST00000637692 PABPC4Q13310 644 aaKnown RBP eCLIP17.35■□□□□ 0.37
CACNA1A-245ENST00000637692 REM2Q8IYK8 340 aaPredicted RBP17.35■□□□□ 0.37
CACNA1A-245ENST00000637692 FANCBQ8NB91 859 aa17.35■□□□□ 0.37
CACNA1A-245ENST00000637692 EMILIN3Q9NT22 766 aa17.35■□□□□ 0.37
CACNA1A-245ENST00000637692 TPCN1Q9ULQ1 816 aa17.35■□□□□ 0.37
CACNA1A-245ENST00000637692 PHIPQ8WWQ0 1821 aa17.35■□□□□ 0.37
CACNA1A-245ENST00000637692 TESPA1A2RU30 521 aaPredicted RBP17.34■□□□□ 0.37
CACNA1A-245ENST00000637692 PFKFB2O60825 505 aa17.34■□□□□ 0.37
CACNA1A-245ENST00000637692 BMP3P12645 472 aa17.34■□□□□ 0.37
CACNA1A-245ENST00000637692 VCAM1P19320 739 aa17.34■□□□□ 0.37
CACNA1A-245ENST00000637692 SMARCA1P28370 1054 aa17.34■□□□□ 0.37
CACNA1A-245ENST00000637692 METAP2P50579 478 aaKnown RBP eCLIP17.34■□□□□ 0.37
CACNA1A-245ENST00000637692 ZNF543Q08ER8 600 aa17.34■□□□□ 0.37
CACNA1A-245ENST00000637692 NOGQ13253 232 aa17.34■□□□□ 0.37
CACNA1A-245ENST00000637692 DEFB115Q30KQ5 88 aa17.34■□□□□ 0.37
CACNA1A-245ENST00000637692 MICU3Q86XE3 530 aa17.34■□□□□ 0.37
CACNA1A-245ENST00000637692 MS4A4AQ96JQ5 239 aa17.34■□□□□ 0.37
CACNA1A-245ENST00000637692 SLKQ9H2G2 1235 aaPredicted RBP17.34■□□□□ 0.37
CACNA1A-245ENST00000637692 ZCCHC17Q9NP64 241 aaKnown RBP17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms