RNA–Protein interactions for RNA: ENST00000636314.1

CLN6-214, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 442 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-214ENST00000636314 ACER1Q8TDN7 264 aa22.02■■□□□ 1.12
CLN6-214ENST00000636314 NUDT12Q9BQG2 462 aa22.02■■□□□ 1.12
CLN6-214ENST00000636314 SUPT16HQ9Y5B9 1047 aaKnown RBP22.02■■□□□ 1.12
CLN6-214ENST00000636314 FRMPD3Q5JV73 1810 aa22.01■■□□□ 1.11
CLN6-214ENST00000636314 M0R2C6 588 aa22.01■■□□□ 1.11
CLN6-214ENST00000636314 GNAT2P19087 354 aa22.01■■□□□ 1.11
CLN6-214ENST00000636314 MNX1P50219 401 aaPredicted RBP22.01■■□□□ 1.11
CLN6-214ENST00000636314 C16orf86Q6ZW13 317 aa22.01■■□□□ 1.11
CLN6-214ENST00000636314 CCAR1Q8IX12 1150 aaKnown RBP22.01■■□□□ 1.11
CLN6-214ENST00000636314 SOCS4Q8WXH5 440 aa22.01■■□□□ 1.11
CLN6-214ENST00000636314 TXNRD2Q9NNW7 524 aa22.01■■□□□ 1.11
CLN6-214ENST00000636314 OGDHLQ9ULD0 1010 aa22.01■■□□□ 1.11
CLN6-214ENST00000636314 SMIM22K7EJ46 135 aa22■■□□□ 1.11
CLN6-214ENST00000636314 AKR1B1P15121 316 aa22■■□□□ 1.11
CLN6-214ENST00000636314 VCAM1P19320 739 aa22■■□□□ 1.11
CLN6-214ENST00000636314 CDK8P49336 464 aa22■■□□□ 1.11
CLN6-214ENST00000636314 GIMAP6Q6P9H5 292 aa22■■□□□ 1.11
CLN6-214ENST00000636314 GTF3C2Q8WUA4 911 aaPredicted RBP22■■□□□ 1.11
CLN6-214ENST00000636314 CCDC17Q96LX7 622 aa22■■□□□ 1.11
CLN6-214ENST00000636314 GSG1L2A8MUP6 293 aa21.99■■□□□ 1.11
CLN6-214ENST00000636314 ZKSCAN1P17029 563 aaPredicted RBP21.99■■□□□ 1.11
CLN6-214ENST00000636314 TDO2P48775 406 aa21.99■■□□□ 1.11
CLN6-214ENST00000636314 PDE1AP54750 535 aa21.99■■□□□ 1.11
CLN6-214ENST00000636314 MAP3K21Q5TCX8 1036 aa21.99■■□□□ 1.11
CLN6-214ENST00000636314 SMC5Q8IY18 1101 aa21.99■■□□□ 1.11
CLN6-214ENST00000636314 PAGR1Q9BTK6 254 aa21.99■■□□□ 1.11
CLN6-214ENST00000636314 LNPKQ9C0E8 428 aa21.99■■□□□ 1.11
CLN6-214ENST00000636314 USP17L15C9J2P7 530 aa21.98■■□□□ 1.11
CLN6-214ENST00000636314 USP17L13C9JLJ4 530 aa21.98■■□□□ 1.11
CLN6-214ENST00000636314 USP17L11C9JVI0 530 aa21.98■■□□□ 1.11
CLN6-214ENST00000636314 USP17L18D6R9N7 530 aa21.98■■□□□ 1.11
CLN6-214ENST00000636314 USP17L22D6RA61 530 aa21.98■■□□□ 1.11
CLN6-214ENST00000636314 USP17L17D6RBQ6 530 aa21.98■■□□□ 1.11
CLN6-214ENST00000636314 USP17L19D6RCP7 530 aa21.98■■□□□ 1.11
CLN6-214ENST00000636314 USP17L20D6RJB6 530 aa21.98■■□□□ 1.11
CLN6-214ENST00000636314 MAPK4P31152 587 aa21.98■■□□□ 1.11
CLN6-214ENST00000636314 MAGEA10P43363 369 aaPredicted RBP21.98■■□□□ 1.11
CLN6-214ENST00000636314 ICA1Q05084 483 aa21.98■■□□□ 1.11
CLN6-214ENST00000636314 USP17L24Q0WX57 530 aa21.98■■□□□ 1.11
CLN6-214ENST00000636314 SBK1Q52WX2 424 aa21.98■■□□□ 1.11
CLN6-214ENST00000636314 TRMT44Q8IYL2 757 aaKnown RBP21.98■■□□□ 1.11
CLN6-214ENST00000636314 ARHGEF10LQ9HCE6 1279 aa21.98■■□□□ 1.11
CLN6-214ENST00000636314 CWC22Q9HCG8 908 aaKnown RBP21.98■■□□□ 1.11
CLN6-214ENST00000636314 APPP05067 770 aa21.97■■□□□ 1.11
CLN6-214ENST00000636314 XRCC5P13010 732 aaKnown RBP21.97■■□□□ 1.11
CLN6-214ENST00000636314 ERVK-9P63128 1117 aa21.97■■□□□ 1.11
CLN6-214ENST00000636314 ERVK-24P63145 666 aa21.97■■□□□ 1.11
CLN6-214ENST00000636314 CACNB2Q08289 660 aaPredicted RBP21.97■■□□□ 1.11
CLN6-214ENST00000636314 ZMYM1Q5SVZ6 1142 aa21.97■■□□□ 1.11
CLN6-214ENST00000636314 B4GALNT3Q6L9W6 998 aa21.97■■□□□ 1.11
CLN6-214ENST00000636314 CLEC10AQ8IUN9 316 aa21.97■■□□□ 1.11
CLN6-214ENST00000636314 SEC62Q99442 399 aaKnown RBP21.97■■□□□ 1.11
CLN6-214ENST00000636314 EPB41L4AQ9HCS5 686 aaPredicted RBP21.97■■□□□ 1.11
CLN6-214ENST00000636314 RBPJLQ9UBG7 517 aa21.97■■□□□ 1.11
CLN6-214ENST00000636314 PFASO15067 1338 aa21.97■■□□□ 1.11
CLN6-214ENST00000636314 ROBO3Q96MS0 1386 aa21.97■■□□□ 1.11
CLN6-214ENST00000636314 A0A1W2PRG0 241 aa21.96■■□□□ 1.11
CLN6-214ENST00000636314 MINDY4BA8MYZ0 360 aa21.96■■□□□ 1.11
CLN6-214ENST00000636314 RGS2P41220 211 aa21.96■■□□□ 1.11
CLN6-214ENST00000636314 Q3C1V9 767 aa21.96■■□□□ 1.11
CLN6-214ENST00000636314 DEFB123Q8N688 67 aa21.96■■□□□ 1.11
CLN6-214ENST00000636314 EVI5LQ96CN4 794 aa21.96■■□□□ 1.11
CLN6-214ENST00000636314 NACAP1Q9BZK3 213 aa21.96■■□□□ 1.11
CLN6-214ENST00000636314 UBE2OQ9C0C9 1292 aaKnown RBP21.96■■□□□ 1.11
CLN6-214ENST00000636314 PORCNQ9H237 461 aa21.96■■□□□ 1.11
CLN6-214ENST00000636314 RPAP3Q9H6T3 665 aaPredicted RBP21.96■■□□□ 1.11
CLN6-214ENST00000636314 SH2D4AQ9H788 454 aa21.96■■□□□ 1.11
CLN6-214ENST00000636314 GREB1LQ9C091 1923 aaPredicted RBP21.96■■□□□ 1.11
CLN6-214ENST00000636314 IGHDP01880 384 aa21.95■■□□□ 1.1
CLN6-214ENST00000636314 CCL14Q16627 93 aa21.95■■□□□ 1.1
CLN6-214ENST00000636314 CATSPERGQ6ZRH7 1159 aa21.95■■□□□ 1.1
CLN6-214ENST00000636314 Q7L0L9 218 aa21.95■■□□□ 1.1
CLN6-214ENST00000636314 GPR142Q7Z601 462 aa21.95■■□□□ 1.1
CLN6-214ENST00000636314 PLEKHH3Q7Z736 793 aa21.95■■□□□ 1.1
CLN6-214ENST00000636314 TDHQ8IZJ6 230 aa21.95■■□□□ 1.1
CLN6-214ENST00000636314 PATL2C9JE40 543 aaKnown RBP21.94■■□□□ 1.1
CLN6-214ENST00000636314 CCND3P30281 292 aaPredicted RBP21.94■■□□□ 1.1
CLN6-214ENST00000636314 GPR153Q6NV75 609 aa21.94■■□□□ 1.1
CLN6-214ENST00000636314 CHD1LQ86WJ1 897 aa21.94■■□□□ 1.1
CLN6-214ENST00000636314 IFNL3Q8IZI9 196 aa21.94■■□□□ 1.1
CLN6-214ENST00000636314 STK11IPQ8N1F8 1099 aa21.94■■□□□ 1.1
CLN6-214ENST00000636314 MKNK2Q9HBH9 465 aa21.94■■□□□ 1.1
CLN6-214ENST00000636314 LRIT3Q3SXY7 679 aa21.93■■□□□ 1.1
CLN6-214ENST00000636314 MORN1Q5T089 497 aa21.93■■□□□ 1.1
CLN6-214ENST00000636314 DNAH12Q6ZR08 3092 aa21.93■■□□□ 1.1
CLN6-214ENST00000636314 LPAR1Q92633 364 aa21.93■■□□□ 1.1
CLN6-214ENST00000636314 USP6NLQ92738 828 aa21.93■■□□□ 1.1
CLN6-214ENST00000636314 APBA2Q99767 749 aa21.93■■□□□ 1.1
CLN6-214ENST00000636314 TANGO6Q9C0B7 1094 aa21.93■■□□□ 1.1
CLN6-214ENST00000636314 NAPBQ9H115 298 aa21.93■■□□□ 1.1
CLN6-214ENST00000636314 TMX2Q9Y320 296 aa21.93■■□□□ 1.1
CLN6-214ENST00000636314 ATP2B2Q01814 1243 aa21.92■■□□□ 1.1
CLN6-214ENST00000636314 NUCB1Q02818 461 aa21.92■■□□□ 1.1
CLN6-214ENST00000636314 WDR78Q5VTH9 848 aa21.92■■□□□ 1.1
CLN6-214ENST00000636314 KANSL2Q9H9L4 492 aa21.92■■□□□ 1.1
CLN6-214ENST00000636314 ZNF287Q9HBT7 754 aa21.92■■□□□ 1.1
CLN6-214ENST00000636314 RABGAP1Q9Y3P9 1069 aa21.92■■□□□ 1.1
CLN6-214ENST00000636314 A0A0C4DFX4 3053 aa21.92■■□□□ 1.1
CLN6-214ENST00000636314 A0A0G2JMZ2 1700 aa21.92■■□□□ 1.1
CLN6-214ENST00000636314 SPDYE16A6NNV3 312 aaPredicted RBP21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms