RNA–Protein interactions for RNA: ENST00000636010.1

SPTAN1-229, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 5

Gene SPTAN1, Length 1,472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-229ENST00000636010 RUFY2Q8WXA3 655 aa13.7□□□□□ -0.22
SPTAN1-229ENST00000636010 PARK7Q99497 189 aaKnown RBP13.7□□□□□ -0.22
SPTAN1-229ENST00000636010 KANSL2Q9H9L4 492 aa13.7□□□□□ -0.22
SPTAN1-229ENST00000636010 TOMM22Q9NS69 142 aa13.7□□□□□ -0.22
SPTAN1-229ENST00000636010 SLC45A1Q9Y2W3 748 aa13.7□□□□□ -0.22
SPTAN1-229ENST00000636010 BRCA2P51587 3418 aa13.7□□□□□ -0.22
SPTAN1-229ENST00000636010 ZNF213O14771 459 aa13.69□□□□□ -0.22
SPTAN1-229ENST00000636010 RANBP6O60518 1105 aaKnown RBP13.69□□□□□ -0.22
SPTAN1-229ENST00000636010 SLC3A2P08195 630 aaKnown RBP13.69□□□□□ -0.22
SPTAN1-229ENST00000636010 CYP21A2P08686 494 aa13.69□□□□□ -0.22
SPTAN1-229ENST00000636010 TSPY3P0CV98 308 aa13.69□□□□□ -0.22
SPTAN1-229ENST00000636010 TSPY8P0CW00 308 aa13.69□□□□□ -0.22
SPTAN1-229ENST00000636010 HOXA7P31268 230 aaPredicted RBP13.69□□□□□ -0.22
SPTAN1-229ENST00000636010 SP3Q02447 781 aa13.69□□□□□ -0.22
SPTAN1-229ENST00000636010 CTU1Q7Z7A3 348 aaKnown RBP13.69□□□□□ -0.22
SPTAN1-229ENST00000636010 LRRC47Q8N1G4 583 aaKnown RBP13.69□□□□□ -0.22
SPTAN1-229ENST00000636010 P2RX7Q99572 595 aaKnown RBP13.69□□□□□ -0.22
SPTAN1-229ENST00000636010 LSG1Q9H089 658 aaKnown RBP13.69□□□□□ -0.22
SPTAN1-229ENST00000636010 RPAP3Q9H6T3 665 aaPredicted RBP13.69□□□□□ -0.22
SPTAN1-229ENST00000636010 VCPKMTQ9H867 229 aa13.69□□□□□ -0.22
SPTAN1-229ENST00000636010 ARHGEF10LQ9HCE6 1279 aa13.69□□□□□ -0.22
SPTAN1-229ENST00000636010 MTMR4Q9NYA4 1195 aa13.69□□□□□ -0.22
SPTAN1-229ENST00000636010 TSPY2A6NKD2 308 aa13.68□□□□□ -0.22
SPTAN1-229ENST00000636010 USP14P54578 494 aa13.68□□□□□ -0.22
SPTAN1-229ENST00000636010 COL9A3Q14050 684 aaPredicted RBP13.68□□□□□ -0.22
SPTAN1-229ENST00000636010 ANKRD13CQ8N6S4 541 aa13.68□□□□□ -0.22
SPTAN1-229ENST00000636010 CHMP4CQ96CF2 233 aa13.68□□□□□ -0.22
SPTAN1-229ENST00000636010 NUP88Q99567 741 aaPredicted RBP13.68□□□□□ -0.22
SPTAN1-229ENST00000636010 TXNRD2Q9NNW7 524 aa13.68□□□□□ -0.22
SPTAN1-229ENST00000636010 NYAP2Q9P242 653 aa13.68□□□□□ -0.22
SPTAN1-229ENST00000636010 CLIP2Q9UDT6 1046 aa13.68□□□□□ -0.22
SPTAN1-229ENST00000636010 RBM8AQ9Y5S9 174 aaKnown RBP13.68□□□□□ -0.22
SPTAN1-229ENST00000636010 B4E1Z4 1266 aa13.67□□□□□ -0.22
SPTAN1-229ENST00000636010 CDC45O75419 566 aa13.67□□□□□ -0.22
SPTAN1-229ENST00000636010 HERVK_113P62684 666 aa13.67□□□□□ -0.22
SPTAN1-229ENST00000636010 IRX3P78415 501 aaPredicted RBP13.67□□□□□ -0.22
SPTAN1-229ENST00000636010 LACTBP83111 547 aaPredicted RBP13.67□□□□□ -0.22
SPTAN1-229ENST00000636010 PKN2Q16513 984 aaKnown RBP13.67□□□□□ -0.22
SPTAN1-229ENST00000636010 CATSPERGQ6ZRH7 1159 aa13.67□□□□□ -0.22
SPTAN1-229ENST00000636010 MFSD6Q6ZSS7 791 aa13.67□□□□□ -0.22
SPTAN1-229ENST00000636010 STOX1Q6ZVD7 989 aa13.67□□□□□ -0.22
SPTAN1-229ENST00000636010 SMCR8Q8TEV9 937 aaPredicted RBP13.67□□□□□ -0.22
SPTAN1-229ENST00000636010 MAP4K1Q92918 833 aa13.67□□□□□ -0.22
SPTAN1-229ENST00000636010 ZKSCAN3Q9BRR0 538 aa13.67□□□□□ -0.22
SPTAN1-229ENST00000636010 ZNF287Q9HBT7 754 aa13.67□□□□□ -0.22
SPTAN1-229ENST00000636010 PNMA3Q9UL41 463 aa13.67□□□□□ -0.22
SPTAN1-229ENST00000636010 LCTP09848 1927 aa13.67□□□□□ -0.22
SPTAN1-229ENST00000636010 RAD21O60216 631 aa13.67□□□□□ -0.22
SPTAN1-229ENST00000636010 OSBPP22059 807 aa13.67□□□□□ -0.22
SPTAN1-229ENST00000636010 IMMTQ16891 758 aaKnown RBP13.67□□□□□ -0.22
SPTAN1-229ENST00000636010 OTOP1Q7RTM1 612 aa13.67□□□□□ -0.22
SPTAN1-229ENST00000636010 FBXO28Q9NVF7 368 aa13.67□□□□□ -0.22
SPTAN1-229ENST00000636010 PCDH10Q9P2E7 1040 aa13.67□□□□□ -0.22
SPTAN1-229ENST00000636010 TRIM17Q9Y577 477 aa13.67□□□□□ -0.22
SPTAN1-229ENST00000636010 MCM3APO60318 1980 aa13.66□□□□□ -0.22
SPTAN1-229ENST00000636010 RBBP6Q7Z6E9 1792 aaKnown RBP13.66□□□□□ -0.22
SPTAN1-229ENST00000636010 SPDYE16A6NNV3 312 aaPredicted RBP13.66□□□□□ -0.22
SPTAN1-229ENST00000636010 USP17L15C9J2P7 530 aa13.66□□□□□ -0.22
SPTAN1-229ENST00000636010 USP17L13C9JLJ4 530 aa13.66□□□□□ -0.22
SPTAN1-229ENST00000636010 USP17L11C9JVI0 530 aa13.66□□□□□ -0.22
SPTAN1-229ENST00000636010 USP17L18D6R9N7 530 aa13.66□□□□□ -0.22
SPTAN1-229ENST00000636010 USP17L22D6RA61 530 aa13.66□□□□□ -0.22
SPTAN1-229ENST00000636010 USP17L17D6RBQ6 530 aa13.66□□□□□ -0.22
SPTAN1-229ENST00000636010 USP17L19D6RCP7 530 aa13.66□□□□□ -0.22
SPTAN1-229ENST00000636010 USP17L20D6RJB6 530 aa13.66□□□□□ -0.22
SPTAN1-229ENST00000636010 KDM4AO75164 1064 aa13.66□□□□□ -0.22
SPTAN1-229ENST00000636010 CNMDO75829 334 aa13.66□□□□□ -0.22
SPTAN1-229ENST00000636010 NDUFB10O96000 172 aa13.66□□□□□ -0.22
SPTAN1-229ENST00000636010 NOVP48745 357 aa13.66□□□□□ -0.22
SPTAN1-229ENST00000636010 USP17L24Q0WX57 530 aa13.66□□□□□ -0.22
SPTAN1-229ENST00000636010 PABPC4Q13310 644 aaKnown RBP eCLIP13.66□□□□□ -0.22
SPTAN1-229ENST00000636010 FAM83BQ5T0W9 1011 aa13.66□□□□□ -0.22
SPTAN1-229ENST00000636010 RCSD1Q6JBY9 416 aa13.66□□□□□ -0.22
SPTAN1-229ENST00000636010 TRIM47Q96LD4 638 aa13.66□□□□□ -0.22
SPTAN1-229ENST00000636010 TANGO6Q9C0B7 1094 aa13.66□□□□□ -0.22
SPTAN1-229ENST00000636010 ANO2Q9NQ90 1003 aa13.66□□□□□ -0.22
SPTAN1-229ENST00000636010 RBPJLQ9UBG7 517 aa13.66□□□□□ -0.22
SPTAN1-229ENST00000636010 STX8Q9UNK0 236 aa13.66□□□□□ -0.22
SPTAN1-229ENST00000636010 BAZ2BQ9UIF8 2168 aaKnown RBP13.66□□□□□ -0.22
SPTAN1-229ENST00000636010 F5H6K3 240 aa13.65□□□□□ -0.22
SPTAN1-229ENST00000636010 WDR46O15213 610 aaKnown RBP13.65□□□□□ -0.22
SPTAN1-229ENST00000636010 TTLL1O95922 423 aa13.65□□□□□ -0.22
SPTAN1-229ENST00000636010 SOX10P56693 466 aa13.65□□□□□ -0.22
SPTAN1-229ENST00000636010 KLRC3Q07444 240 aa13.65□□□□□ -0.22
SPTAN1-229ENST00000636010 FAM110CQ1W6H9 321 aa13.65□□□□□ -0.22
SPTAN1-229ENST00000636010 Q3C1V9 767 aa13.65□□□□□ -0.22
SPTAN1-229ENST00000636010 CYB5R4Q7L1T6 521 aa13.65□□□□□ -0.22
SPTAN1-229ENST00000636010 MKL1Q969V6 931 aa13.65□□□□□ -0.22
SPTAN1-229ENST00000636010 ERO1AQ96HE7 468 aa13.65□□□□□ -0.22
SPTAN1-229ENST00000636010 PAGR1Q9BTK6 254 aa13.65□□□□□ -0.22
SPTAN1-229ENST00000636010 SH2D4AQ9H788 454 aa13.65□□□□□ -0.22
SPTAN1-229ENST00000636010 BTBD7Q9P203 1132 aa13.65□□□□□ -0.22
SPTAN1-229ENST00000636010 CTNNA3Q9UI47 895 aa13.65□□□□□ -0.22
SPTAN1-229ENST00000636010 U3KPZ7 1027 aaPredicted RBP13.65□□□□□ -0.22
SPTAN1-229ENST00000636010 FRMPD3Q5JV73 1810 aa13.65□□□□□ -0.22
SPTAN1-229ENST00000636010 ZNF236Q9UL36 1845 aa13.65□□□□□ -0.22
SPTAN1-229ENST00000636010 SAMD1Q6SPF0 538 aaPredicted RBP13.64□□□□□ -0.23
SPTAN1-229ENST00000636010 LPAR1Q92633 364 aa13.64□□□□□ -0.23
SPTAN1-229ENST00000636010 ATG4CQ96DT6 458 aa13.64□□□□□ -0.23
SPTAN1-229ENST00000636010 RNF41Q9H4P4 317 aaPredicted RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms