RNA–Protein interactions for RNA: ENST00000628810.1

SOX2-OT-249, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 618 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-249ENST00000628810 PPATQ06203 517 aa11.6□□□□□ -0.55
SOX2-OT-249ENST00000628810 SEPT2Q15019 361 aa11.6□□□□□ -0.55
SOX2-OT-249ENST00000628810 CCDC178Q5BJE1 867 aa11.6□□□□□ -0.55
SOX2-OT-249ENST00000628810 DHX32Q7L7V1 743 aaKnown RBP11.6□□□□□ -0.55
SOX2-OT-249ENST00000628810 IQCA1Q86XH1 822 aa11.6□□□□□ -0.55
SOX2-OT-249ENST00000628810 ERO1BQ86YB8 467 aa11.6□□□□□ -0.55
SOX2-OT-249ENST00000628810 IL27Q8NEV9 243 aa11.6□□□□□ -0.55
SOX2-OT-249ENST00000628810 ANKS1AQ92625 1134 aa11.6□□□□□ -0.55
SOX2-OT-249ENST00000628810 CEP95Q96GE4 821 aa11.6□□□□□ -0.55
SOX2-OT-249ENST00000628810 CLMNQ96JQ2 1002 aa11.6□□□□□ -0.55
SOX2-OT-249ENST00000628810 JAKMIP1Q96N16 626 aaKnown RBP11.6□□□□□ -0.55
SOX2-OT-249ENST00000628810 WDR18Q9BV38 432 aa11.6□□□□□ -0.55
SOX2-OT-249ENST00000628810 KANSL2Q9H9L4 492 aa11.6□□□□□ -0.55
SOX2-OT-249ENST00000628810 TOMM22Q9NS69 142 aa11.6□□□□□ -0.55
SOX2-OT-249ENST00000628810 MTMR4Q9NYA4 1195 aa11.6□□□□□ -0.55
SOX2-OT-249ENST00000628810 TNKSO95271 1327 aa11.6□□□□□ -0.55
SOX2-OT-249ENST00000628810 RASSF10A6NK89 507 aa11.59□□□□□ -0.55
SOX2-OT-249ENST00000628810 MPHOSPH10O00566 681 aaKnown RBP11.59□□□□□ -0.55
SOX2-OT-249ENST00000628810 PRC1O43663 620 aa11.59□□□□□ -0.55
SOX2-OT-249ENST00000628810 ZBTB48P10074 688 aaPredicted RBP11.59□□□□□ -0.55
SOX2-OT-249ENST00000628810 CASTP20810 708 aaKnown RBP11.59□□□□□ -0.55
SOX2-OT-249ENST00000628810 PPIL2Q13356 520 aa11.59□□□□□ -0.55
SOX2-OT-249ENST00000628810 RAB3GAP1Q15042 981 aa11.59□□□□□ -0.55
SOX2-OT-249ENST00000628810 SEC23AQ15436 765 aa11.59□□□□□ -0.55
SOX2-OT-249ENST00000628810 RCSD1Q6JBY9 416 aa11.59□□□□□ -0.55
SOX2-OT-249ENST00000628810 BLOC1S2Q6QNY1 142 aa11.59□□□□□ -0.55
SOX2-OT-249ENST00000628810 RUFY3Q7L099 469 aa11.59□□□□□ -0.55
SOX2-OT-249ENST00000628810 DGKHQ86XP1 1220 aa11.59□□□□□ -0.55
SOX2-OT-249ENST00000628810 SIAH1Q8IUQ4 282 aa11.59□□□□□ -0.55
SOX2-OT-249ENST00000628810 ENAHQ8N8S7 591 aaPredicted RBP11.59□□□□□ -0.55
SOX2-OT-249ENST00000628810 MKL1Q969V6 931 aa11.59□□□□□ -0.55
SOX2-OT-249ENST00000628810 TMEM87BQ96K49 555 aa11.59□□□□□ -0.55
SOX2-OT-249ENST00000628810 TTC14Q96N46 770 aa11.59□□□□□ -0.55
SOX2-OT-249ENST00000628810 ZSCAN10Q96SZ4 725 aaPredicted RBP11.59□□□□□ -0.55
SOX2-OT-249ENST00000628810 AGXT2Q9BYV1 514 aa11.59□□□□□ -0.55
SOX2-OT-249ENST00000628810 ELP3Q9H9T3 547 aa11.59□□□□□ -0.55
SOX2-OT-249ENST00000628810 AS3MTQ9HBK9 375 aa11.59□□□□□ -0.55
SOX2-OT-249ENST00000628810 NYAP2Q9P242 653 aa11.59□□□□□ -0.55
SOX2-OT-249ENST00000628810 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.59□□□□□ -0.55
SOX2-OT-249ENST00000628810 PTPRFP10586 1907 aa11.58□□□□□ -0.55
SOX2-OT-249ENST00000628810 SH2B2O14492 632 aaPredicted RBP11.58□□□□□ -0.56
SOX2-OT-249ENST00000628810 NMT2O60551 498 aa11.58□□□□□ -0.56
SOX2-OT-249ENST00000628810 TTLL1O95922 423 aa11.58□□□□□ -0.56
SOX2-OT-249ENST00000628810 GJA5P36382 358 aa11.58□□□□□ -0.56
SOX2-OT-249ENST00000628810 SART3Q15020 963 aaKnown RBP11.58□□□□□ -0.56
SOX2-OT-249ENST00000628810 RGMBQ6NW40 437 aa11.58□□□□□ -0.56
SOX2-OT-249ENST00000628810 RASAL3Q86YV0 1011 aa11.58□□□□□ -0.56
SOX2-OT-249ENST00000628810 CLEC10AQ8IUN9 316 aa11.58□□□□□ -0.56
SOX2-OT-249ENST00000628810 ZNF280CQ8ND82 737 aa11.58□□□□□ -0.56
SOX2-OT-249ENST00000628810 FBXO22Q8NEZ5 403 aa11.58□□□□□ -0.56
SOX2-OT-249ENST00000628810 IGDCC4Q8TDY8 1250 aa11.58□□□□□ -0.56
SOX2-OT-249ENST00000628810 OPTNQ96CV9 577 aa11.58□□□□□ -0.56
SOX2-OT-249ENST00000628810 WNK4Q96J92 1243 aa11.58□□□□□ -0.56
SOX2-OT-249ENST00000628810 UBAC1Q9BSL1 405 aa11.58□□□□□ -0.56
SOX2-OT-249ENST00000628810 KIAA1683Q9H0B3 1180 aa11.58□□□□□ -0.56
SOX2-OT-249ENST00000628810 ALDH8A1Q9H2A2 487 aaPredicted RBP11.58□□□□□ -0.56
SOX2-OT-249ENST00000628810 KCNH4Q9UQ05 1017 aa11.58□□□□□ -0.56
SOX2-OT-249ENST00000628810 TMX2Q9Y320 296 aa11.58□□□□□ -0.56
SOX2-OT-249ENST00000628810 AFG3L2Q9Y4W6 797 aa11.58□□□□□ -0.56
SOX2-OT-249ENST00000628810 MYH4Q9Y623 1939 aa11.57□□□□□ -0.56
SOX2-OT-249ENST00000628810 A0A1W2PRG0 241 aa11.57□□□□□ -0.56
SOX2-OT-249ENST00000628810 SLC10A3P09131 477 aa11.57□□□□□ -0.56
SOX2-OT-249ENST00000628810 EEF2P13639 858 aaKnown RBP11.57□□□□□ -0.56
SOX2-OT-249ENST00000628810 LIFRP42702 1097 aa11.57□□□□□ -0.56
SOX2-OT-249ENST00000628810 C1QTNF8P60827 252 aa11.57□□□□□ -0.56
SOX2-OT-249ENST00000628810 SH3D19Q5HYK7 790 aa11.57□□□□□ -0.56
SOX2-OT-249ENST00000628810 CCDC84Q86UT8 332 aaPredicted RBP11.57□□□□□ -0.56
SOX2-OT-249ENST00000628810 SGMS1Q86VZ5 419 aa11.57□□□□□ -0.56
SOX2-OT-249ENST00000628810 SLC10A4Q96EP9 437 aa11.57□□□□□ -0.56
SOX2-OT-249ENST00000628810 C12orf42Q96LP6 360 aa11.57□□□□□ -0.56
SOX2-OT-249ENST00000628810 SH2D4AQ9H788 454 aa11.57□□□□□ -0.56
SOX2-OT-249ENST00000628810 LY9Q9HBG7 655 aa11.57□□□□□ -0.56
SOX2-OT-249ENST00000628810 ARHGEF10LQ9HCE6 1279 aa11.57□□□□□ -0.56
SOX2-OT-249ENST00000628810 ABT1Q9ULW3 272 aaKnown RBP11.57□□□□□ -0.56
SOX2-OT-249ENST00000628810 CYP46A1Q9Y6A2 500 aa11.57□□□□□ -0.56
SOX2-OT-249ENST00000628810 ZHX2Q9Y6X8 837 aa11.57□□□□□ -0.56
SOX2-OT-249ENST00000628810 FAM155AB1AL88 458 aaPredicted RBP11.56□□□□□ -0.56
SOX2-OT-249ENST00000628810 CXCL11O14625 94 aa11.56□□□□□ -0.56
SOX2-OT-249ENST00000628810 IFIT3O14879 490 aaKnown RBP11.56□□□□□ -0.56
SOX2-OT-249ENST00000628810 TOP1P11387 765 aaKnown RBP11.56□□□□□ -0.56
SOX2-OT-249ENST00000628810 CPA1P15085 419 aa11.56□□□□□ -0.56
SOX2-OT-249ENST00000628810 BACE1P56817 501 aa11.56□□□□□ -0.56
SOX2-OT-249ENST00000628810 RABEP1Q15276 862 aa11.56□□□□□ -0.56
SOX2-OT-249ENST00000628810 TMEM67Q5HYA8 995 aa11.56□□□□□ -0.56
SOX2-OT-249ENST00000628810 SPRYD7Q5W111 196 aa11.56□□□□□ -0.56
SOX2-OT-249ENST00000628810 CHST3Q7LGC8 479 aa11.56□□□□□ -0.56
SOX2-OT-249ENST00000628810 GMCL1P1Q8NEA9 526 aa11.56□□□□□ -0.56
SOX2-OT-249ENST00000628810 ACER1Q8TDN7 264 aa11.56□□□□□ -0.56
SOX2-OT-249ENST00000628810 TMEM47Q9BQJ4 181 aa11.56□□□□□ -0.56
SOX2-OT-249ENST00000628810 ZKSCAN3Q9BRR0 538 aa11.56□□□□□ -0.56
SOX2-OT-249ENST00000628810 UPF3BQ9BZI7 483 aaKnown RBP11.56□□□□□ -0.56
SOX2-OT-249ENST00000628810 STX8Q9UNK0 236 aa11.56□□□□□ -0.56
SOX2-OT-249ENST00000628810 NID2Q14112 1375 aa11.55□□□□□ -0.56
SOX2-OT-249ENST00000628810 A0A0G2JLL6 359 aaPredicted RBP11.55□□□□□ -0.56
SOX2-OT-249ENST00000628810 ERICH2A1L162 156 aa11.55□□□□□ -0.56
SOX2-OT-249ENST00000628810 C19orf81C9J6K1 198 aa11.55□□□□□ -0.56
SOX2-OT-249ENST00000628810 USP17L10C9JJH3 530 aa11.55□□□□□ -0.56
SOX2-OT-249ENST00000628810 IRF6O14896 467 aa11.55□□□□□ -0.56
SOX2-OT-249ENST00000628810 HSPA6P17066 643 aa11.55□□□□□ -0.56
SOX2-OT-249ENST00000628810 ECE1P42892 770 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms