RNA–Protein interactions for RNA: ENST00000625705.1

NPLOC4-221, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5 BASIC

Gene NPLOC4, Length 405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-221ENST00000625705 MINDY4BA8MYZ0 360 aa8.63□□□□□ -1.03
NPLOC4-221ENST00000625705 MPHOSPH10O00566 681 aaKnown RBP8.63□□□□□ -1.03
NPLOC4-221ENST00000625705 CTNND1O60716 968 aaKnown RBP8.63□□□□□ -1.03
NPLOC4-221ENST00000625705 MFAP1P55081 439 aaKnown RBP8.63□□□□□ -1.03
NPLOC4-221ENST00000625705 ZMYM1Q5SVZ6 1142 aa8.63□□□□□ -1.03
NPLOC4-221ENST00000625705 TTC22Q5TAA0 569 aa8.63□□□□□ -1.03
NPLOC4-221ENST00000625705 OTUD7BQ6GQQ9 843 aa8.63□□□□□ -1.03
NPLOC4-221ENST00000625705 NLRP7Q8WX94 980 aa8.63□□□□□ -1.03
NPLOC4-221ENST00000625705 OSBP2Q969R2 916 aa8.63□□□□□ -1.03
NPLOC4-221ENST00000625705 NAPBQ9H115 298 aa8.63□□□□□ -1.03
NPLOC4-221ENST00000625705 OSBPL3Q9H4L5 887 aa8.63□□□□□ -1.03
NPLOC4-221ENST00000625705 DCP1AQ9NPI6 582 aaPredicted RBP8.63□□□□□ -1.03
NPLOC4-221ENST00000625705 PPP4R2Q9NY27 417 aa8.63□□□□□ -1.03
NPLOC4-221ENST00000625705 ARPP21Q9UBL0 812 aaPredicted RBP8.63□□□□□ -1.03
NPLOC4-221ENST00000625705 SNCAIPQ9Y6H5 919 aa8.63□□□□□ -1.03
NPLOC4-221ENST00000625705 DDX60LQ5H9U9 1706 aaKnown RBP8.63□□□□□ -1.03
NPLOC4-221ENST00000625705 MYH8P13535 1937 aa8.62□□□□□ -1.03
NPLOC4-221ENST00000625705 CCL15-CCL14A0A0B4J2E2 113 aa8.62□□□□□ -1.03
NPLOC4-221ENST00000625705 USP17L12C9JPN9 530 aa8.62□□□□□ -1.03
NPLOC4-221ENST00000625705 USP17L21D6R901 530 aa8.62□□□□□ -1.03
NPLOC4-221ENST00000625705 RNF223E7ERA6 249 aa8.62□□□□□ -1.03
NPLOC4-221ENST00000625705 CA12O43570 354 aa8.62□□□□□ -1.03
NPLOC4-221ENST00000625705 GDF11O95390 407 aa8.62□□□□□ -1.03
NPLOC4-221ENST00000625705 SLC3A2P08195 630 aaKnown RBP8.62□□□□□ -1.03
NPLOC4-221ENST00000625705 ASNSP08243 561 aa8.62□□□□□ -1.03
NPLOC4-221ENST00000625705 SDSP20132 328 aa8.62□□□□□ -1.03
NPLOC4-221ENST00000625705 GTF2A2P52657 109 aa8.62□□□□□ -1.03
NPLOC4-221ENST00000625705 NMIQ13287 307 aaPredicted RBP8.62□□□□□ -1.03
NPLOC4-221ENST00000625705 SNAPC2Q13487 334 aa8.62□□□□□ -1.03
NPLOC4-221ENST00000625705 CCL15Q16663 113 aa8.62□□□□□ -1.03
NPLOC4-221ENST00000625705 NOL9Q5SY16 702 aaKnown RBP8.62□□□□□ -1.03
NPLOC4-221ENST00000625705 CWC27Q6UX04 472 aaKnown RBP8.62□□□□□ -1.03
NPLOC4-221ENST00000625705 CCDC129Q6ZRS4 1044 aa8.62□□□□□ -1.03
NPLOC4-221ENST00000625705 STK11IPQ8N1F8 1099 aa8.62□□□□□ -1.03
NPLOC4-221ENST00000625705 RUFY2Q8WXA3 655 aa8.62□□□□□ -1.03
NPLOC4-221ENST00000625705 STRBPQ96SI9 672 aaKnown RBP8.62□□□□□ -1.03
NPLOC4-221ENST00000625705 SEC62Q99442 399 aaKnown RBP8.62□□□□□ -1.03
NPLOC4-221ENST00000625705 FEZ1Q99689 392 aa8.62□□□□□ -1.03
NPLOC4-221ENST00000625705 EHD4Q9H223 541 aa8.62□□□□□ -1.03
NPLOC4-221ENST00000625705 AS3MTQ9HBK9 375 aa8.62□□□□□ -1.03
NPLOC4-221ENST00000625705 CABP5Q9NP86 173 aa8.62□□□□□ -1.03
NPLOC4-221ENST00000625705 HELLSQ9NRZ9 838 aa8.62□□□□□ -1.03
NPLOC4-221ENST00000625705 ZHX2Q9Y6X8 837 aa8.62□□□□□ -1.03
NPLOC4-221ENST00000625705 SIPA1L1O43166 1804 aa8.61□□□□□ -1.03
NPLOC4-221ENST00000625705 CYP2D7A0A087X1C5 515 aa8.61□□□□□ -1.03
NPLOC4-221ENST00000625705 A0A0D9SFI3 127 aa8.61□□□□□ -1.03
NPLOC4-221ENST00000625705 TRIM75PA6NK02 468 aa8.61□□□□□ -1.03
NPLOC4-221ENST00000625705 TRPA1O75762 1119 aa8.61□□□□□ -1.03
NPLOC4-221ENST00000625705 SLURP2P0DP57 97 aa8.61□□□□□ -1.03
NPLOC4-221ENST00000625705 CYP2D6P10635 497 aa8.61□□□□□ -1.03
NPLOC4-221ENST00000625705 CETPP11597 493 aa8.61□□□□□ -1.03
NPLOC4-221ENST00000625705 CAP2P40123 477 aa8.61□□□□□ -1.03
NPLOC4-221ENST00000625705 CTCFP49711 727 aaPredicted RBP8.61□□□□□ -1.03
NPLOC4-221ENST00000625705 INHBEP58166 350 aa8.61□□□□□ -1.03
NPLOC4-221ENST00000625705 PPATQ06203 517 aa8.61□□□□□ -1.03
NPLOC4-221ENST00000625705 PPIL2Q13356 520 aa8.61□□□□□ -1.03
NPLOC4-221ENST00000625705 RAB3GAP1Q15042 981 aa8.61□□□□□ -1.03
NPLOC4-221ENST00000625705 PUS10Q3MIT2 529 aaKnown RBP8.61□□□□□ -1.03
NPLOC4-221ENST00000625705 CERKLQ49MI3 558 aaPredicted RBP8.61□□□□□ -1.03
NPLOC4-221ENST00000625705 MCMDC2Q4G0Z9 681 aa8.61□□□□□ -1.03
NPLOC4-221ENST00000625705 ERICH6BQ5W0A0 696 aa8.61□□□□□ -1.03
NPLOC4-221ENST00000625705 CASC1Q6TDU7 716 aa8.61□□□□□ -1.03
NPLOC4-221ENST00000625705 GADL1Q6ZQY3 521 aa8.61□□□□□ -1.03
NPLOC4-221ENST00000625705 GPIHBP1Q8IV16 184 aa8.61□□□□□ -1.03
NPLOC4-221ENST00000625705 FAM227BQ96M60 508 aa8.61□□□□□ -1.03
NPLOC4-221ENST00000625705 ZIC5Q96T25 663 aa8.61□□□□□ -1.03
NPLOC4-221ENST00000625705 ZNF287Q9HBT7 754 aa8.61□□□□□ -1.03
NPLOC4-221ENST00000625705 SWAP70Q9UH65 585 aa8.61□□□□□ -1.03
NPLOC4-221ENST00000625705 ZNF112Q9UJU3 913 aa8.61□□□□□ -1.03
NPLOC4-221ENST00000625705 CCDC171Q6TFL3 1326 aa8.6□□□□□ -1.03
NPLOC4-221ENST00000625705 USP17L5A8MUK1 530 aa8.6□□□□□ -1.03
NPLOC4-221ENST00000625705 GSG1L2A8MUP6 293 aa8.6□□□□□ -1.03
NPLOC4-221ENST00000625705 PHF20L1A8MW92 1017 aa8.6□□□□□ -1.03
NPLOC4-221ENST00000625705 PATL2C9JE40 543 aaKnown RBP8.6□□□□□ -1.03
NPLOC4-221ENST00000625705 IRF6O14896 467 aa8.6□□□□□ -1.03
NPLOC4-221ENST00000625705 FOXN1O15353 648 aa8.6□□□□□ -1.03
NPLOC4-221ENST00000625705 NR1I2O75469 434 aa8.6□□□□□ -1.03
NPLOC4-221ENST00000625705 S1PR4O95977 384 aa8.6□□□□□ -1.03
NPLOC4-221ENST00000625705 ALDH1A1P00352 501 aa8.6□□□□□ -1.03
NPLOC4-221ENST00000625705 GH2P01242 217 aa8.6□□□□□ -1.03
NPLOC4-221ENST00000625705 GSPT1P15170 499 aaKnown RBP8.6□□□□□ -1.03
NPLOC4-221ENST00000625705 PTPRAP18433 802 aa8.6□□□□□ -1.03
NPLOC4-221ENST00000625705 GJA5P36382 358 aa8.6□□□□□ -1.03
NPLOC4-221ENST00000625705 PLCD1P51178 756 aa8.6□□□□□ -1.03
NPLOC4-221ENST00000625705 ABCB5Q2M3G0 1257 aa8.6□□□□□ -1.03
NPLOC4-221ENST00000625705 GIMAP6Q6P9H5 292 aa8.6□□□□□ -1.03
NPLOC4-221ENST00000625705 CCDC84Q86UT8 332 aaPredicted RBP8.6□□□□□ -1.03
NPLOC4-221ENST00000625705 TICAM2Q86XR7 235 aa8.6□□□□□ -1.03
NPLOC4-221ENST00000625705 SLC44A5Q8NCS7 719 aa8.6□□□□□ -1.03
NPLOC4-221ENST00000625705 DYNLL2Q96FJ2 89 aa8.6□□□□□ -1.03
NPLOC4-221ENST00000625705 TBC1D2Q9BYX2 928 aa8.6□□□□□ -1.03
NPLOC4-221ENST00000625705 MKNK2Q9HBH9 465 aa8.6□□□□□ -1.03
NPLOC4-221ENST00000625705 TOMM22Q9NS69 142 aa8.6□□□□□ -1.03
NPLOC4-221ENST00000625705 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.6□□□□□ -1.03
NPLOC4-221ENST00000625705 DAXXQ9UER7 740 aaPredicted RBP8.6□□□□□ -1.03
NPLOC4-221ENST00000625705 ZBTB21Q9ULJ3 1066 aa8.6□□□□□ -1.03
NPLOC4-221ENST00000625705 NRG2O14511 850 aaPredicted RBP8.59□□□□□ -1.03
NPLOC4-221ENST00000625705 LCE2BO14633 110 aa8.59□□□□□ -1.03
NPLOC4-221ENST00000625705 ATP2B2Q01814 1243 aa8.59□□□□□ -1.03
NPLOC4-221ENST00000625705 MAP3K10Q02779 954 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms