RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 PLCD3Q8N3E9 789 aa10.35□□□□□ -0.75
GGA3-223ENST00000621870 CSGALNACT2Q8N6G5 542 aa10.35□□□□□ -0.75
GGA3-223ENST00000621870 SLC10A4Q96EP9 437 aa10.35□□□□□ -0.75
GGA3-223ENST00000621870 ZSWIM6Q9HCJ5 1215 aa10.35□□□□□ -0.75
GGA3-223ENST00000621870 LUC7L2Q9Y383 392 aaKnown RBP10.35□□□□□ -0.75
GGA3-223ENST00000621870 CARMIL3Q8ND23 1372 aa10.35□□□□□ -0.75
GGA3-223ENST00000621870 UQCRHLA0A096LP55 91 aa10.35□□□□□ -0.75
GGA3-223ENST00000621870 M0R2C6 588 aa10.35□□□□□ -0.75
GGA3-223ENST00000621870 TTLL1O95922 423 aa10.35□□□□□ -0.75
GGA3-223ENST00000621870 UQCRHP07919 91 aa10.35□□□□□ -0.75
GGA3-223ENST00000621870 USP17L2Q6R6M4 530 aa10.35□□□□□ -0.75
GGA3-223ENST00000621870 BRIP1Q9BX63 1249 aa10.35□□□□□ -0.75
GGA3-223ENST00000621870 H0YHG0 523 aa10.35□□□□□ -0.75
GGA3-223ENST00000621870 EXOC3O60645 756 aa10.35□□□□□ -0.75
GGA3-223ENST00000621870 PLCB3Q01970 1234 aa10.35□□□□□ -0.75
GGA3-223ENST00000621870 GPIHBP1Q8IV16 184 aa10.35□□□□□ -0.75
GGA3-223ENST00000621870 NOSTRINQ8IVI9 506 aa10.35□□□□□ -0.75
GGA3-223ENST00000621870 PSMD1Q99460 953 aa10.35□□□□□ -0.75
GGA3-223ENST00000621870 TTC12Q9H892 705 aaPredicted RBP10.35□□□□□ -0.75
GGA3-223ENST00000621870 TULP4Q9NRJ4 1543 aa10.34□□□□□ -0.75
GGA3-223ENST00000621870 GCNT3O95395 438 aa10.34□□□□□ -0.75
GGA3-223ENST00000621870 EPB41P11171 864 aaKnown RBP10.34□□□□□ -0.75
GGA3-223ENST00000621870 GBP2P32456 591 aaPredicted RBP10.34□□□□□ -0.75
GGA3-223ENST00000621870 TECP42680 631 aa10.34□□□□□ -0.75
GGA3-223ENST00000621870 CNNM4Q6P4Q7 775 aa10.34□□□□□ -0.75
GGA3-223ENST00000621870 EEPD1Q7L9B9 569 aa10.34□□□□□ -0.75
GGA3-223ENST00000621870 ISCA1Q9BUE6 129 aa10.34□□□□□ -0.75
GGA3-223ENST00000621870 PLVAPQ9BX97 442 aa10.34□□□□□ -0.75
GGA3-223ENST00000621870 GTPBP4Q9BZE4 634 aaKnown RBP10.34□□□□□ -0.75
GGA3-223ENST00000621870 ATP10DQ9P241 1426 aa10.34□□□□□ -0.75
GGA3-223ENST00000621870 M0QZ92 97 aa10.34□□□□□ -0.75
GGA3-223ENST00000621870 BMP3P12645 472 aa10.34□□□□□ -0.75
GGA3-223ENST00000621870 PDIA3P30101 505 aaKnown RBP10.34□□□□□ -0.75
GGA3-223ENST00000621870 CLCN1P35523 988 aa10.34□□□□□ -0.75
GGA3-223ENST00000621870 CCNA1P78396 465 aa10.34□□□□□ -0.75
GGA3-223ENST00000621870 SETQ01105 290 aaPredicted RBP10.34□□□□□ -0.75
GGA3-223ENST00000621870 TRPC3Q13507 836 aa10.34□□□□□ -0.75
GGA3-223ENST00000621870 PLA2G4DQ86XP0 818 aa10.34□□□□□ -0.75
GGA3-223ENST00000621870 RASGRP4Q8TDF6 673 aa10.34□□□□□ -0.75
GGA3-223ENST00000621870 NOC4LQ9BVI4 516 aaKnown RBP10.34□□□□□ -0.75
GGA3-223ENST00000621870 RRAGDQ9NQL2 400 aaPredicted RBP10.34□□□□□ -0.75
GGA3-223ENST00000621870 RTEL1Q9NZ71 1219 aa10.34□□□□□ -0.75
GGA3-223ENST00000621870 SWAP70Q9UH65 585 aa10.34□□□□□ -0.75
GGA3-223ENST00000621870 GH2P01242 217 aa10.34□□□□□ -0.75
GGA3-223ENST00000621870 PCP11498 1178 aaKnown RBP10.34□□□□□ -0.75
GGA3-223ENST00000621870 IFFO1Q0D2I5 559 aa10.34□□□□□ -0.75
GGA3-223ENST00000621870 WDR44Q5JSH3 913 aa10.34□□□□□ -0.75
GGA3-223ENST00000621870 UTP14CQ5TAP6 766 aaKnown RBP10.34□□□□□ -0.75
GGA3-223ENST00000621870 APBB1IPQ7Z5R6 666 aaPredicted RBP10.34□□□□□ -0.75
GGA3-223ENST00000621870 NEK8Q86SG6 692 aa10.34□□□□□ -0.75
GGA3-223ENST00000621870 USP28Q96RU2 1077 aa10.34□□□□□ -0.75
GGA3-223ENST00000621870 FERMT1Q9BQL6 677 aa10.34□□□□□ -0.75
GGA3-223ENST00000621870 LSG1Q9H089 658 aaKnown RBP10.34□□□□□ -0.75
GGA3-223ENST00000621870 OSBPL3Q9H4L5 887 aa10.34□□□□□ -0.75
GGA3-223ENST00000621870 ZSWIM5Q9P217 1185 aa10.34□□□□□ -0.75
GGA3-223ENST00000621870 COMMD10Q9Y6G5 202 aa10.34□□□□□ -0.75
GGA3-223ENST00000621870 GLI2P10070 1586 aa10.33□□□□□ -0.76
GGA3-223ENST00000621870 NCAPD2Q15021 1401 aa10.33□□□□□ -0.76
GGA3-223ENST00000621870 TMEM110-MUSTN1A8MSY1 372 aa10.33□□□□□ -0.76
GGA3-223ENST00000621870 KIF5AQ12840 1032 aa10.33□□□□□ -0.76
GGA3-223ENST00000621870 IFI16Q16666 785 aaKnown RBP10.33□□□□□ -0.76
GGA3-223ENST00000621870 MCF2L2Q86YR7 1114 aa10.33□□□□□ -0.76
GGA3-223ENST00000621870 BLZF1Q9H2G9 400 aa10.33□□□□□ -0.76
GGA3-223ENST00000621870 MRPL44Q9H9J2 332 aaKnown RBP10.33□□□□□ -0.76
GGA3-223ENST00000621870 CTNND2Q9UQB3 1225 aa10.33□□□□□ -0.76
GGA3-223ENST00000621870 ECE2O60344 883 aa10.33□□□□□ -0.76
GGA3-223ENST00000621870 KRT5P13647 590 aa10.33□□□□□ -0.76
GGA3-223ENST00000621870 CRKP46108 304 aa10.33□□□□□ -0.76
GGA3-223ENST00000621870 IREB2P48200 963 aaKnown RBP10.33□□□□□ -0.76
GGA3-223ENST00000621870 ADAMTS13Q76LX8 1427 aa10.33□□□□□ -0.76
GGA3-223ENST00000621870 PFKFB2O60825 505 aa10.33□□□□□ -0.76
GGA3-223ENST00000621870 IGBP1P78318 339 aa10.33□□□□□ -0.76
GGA3-223ENST00000621870 KIAA0753Q2KHM9 967 aa10.33□□□□□ -0.76
GGA3-223ENST00000621870 XKR9Q5GH70 373 aa10.33□□□□□ -0.76
GGA3-223ENST00000621870 NAA15Q9BXJ9 866 aaKnown RBP10.33□□□□□ -0.76
GGA3-223ENST00000621870 MED23Q9ULK4 1368 aa10.32□□□□□ -0.76
GGA3-223ENST00000621870 GOLGA6L9A6NEM1 432 aa10.32□□□□□ -0.76
GGA3-223ENST00000621870 ASNSP08243 561 aa10.32□□□□□ -0.76
GGA3-223ENST00000621870 TRIM28Q13263 835 aaKnown RBP10.32□□□□□ -0.76
GGA3-223ENST00000621870 TMCO3Q6UWJ1 677 aa10.32□□□□□ -0.76
GGA3-223ENST00000621870 FOXP4Q8IVH2 680 aaPredicted RBP10.32□□□□□ -0.76
GGA3-223ENST00000621870 FBXO18Q8NFZ0 1043 aa10.32□□□□□ -0.76
GGA3-223ENST00000621870 DNAI1Q9UI46 699 aa10.32□□□□□ -0.76
GGA3-223ENST00000621870 ZMYM6O95789 1325 aa10.32□□□□□ -0.76
GGA3-223ENST00000621870 CYP2E1P05181 493 aaPredicted RBP10.32□□□□□ -0.76
GGA3-223ENST00000621870 KRT19P08727 400 aa10.32□□□□□ -0.76
GGA3-223ENST00000621870 COA7Q96BR5 231 aa10.32□□□□□ -0.76
GGA3-223ENST00000621870 ZNF341Q9BYN7 854 aa10.32□□□□□ -0.76
GGA3-223ENST00000621870 GBP3Q9H0R5 595 aa10.32□□□□□ -0.76
GGA3-223ENST00000621870 PCDHB13Q9Y5F0 798 aa10.32□□□□□ -0.76
GGA3-223ENST00000621870 DIP2CQ9Y2E4 1556 aa10.32□□□□□ -0.76
GGA3-223ENST00000621870 CDC42BPBQ9Y5S2 1711 aa10.32□□□□□ -0.76
GGA3-223ENST00000621870 SOS2Q07890 1332 aaPredicted RBP10.32□□□□□ -0.76
GGA3-223ENST00000621870 DDAH1O94760 285 aa10.32□□□□□ -0.76
GGA3-223ENST00000621870 KIF4AO95239 1232 aa10.32□□□□□ -0.76
GGA3-223ENST00000621870 CD19P15391 556 aa10.32□□□□□ -0.76
GGA3-223ENST00000621870 LMAN1P49257 510 aa10.32□□□□□ -0.76
GGA3-223ENST00000621870 CDK8P49336 464 aa10.32□□□□□ -0.76
GGA3-223ENST00000621870 SLC44A5Q8NCS7 719 aa10.32□□□□□ -0.76
GGA3-223ENST00000621870 STRBPQ96SI9 672 aaKnown RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms