RNA–Protein interactions for RNA: ENST00000621152.4

SMC6-210, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 3

Gene SMC6, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-210ENST00000621152 TANGO6Q9C0B7 1094 aa24.57■■□□□ 1.52
SMC6-210ENST00000621152 SH2D4AQ9H788 454 aa24.57■■□□□ 1.52
SMC6-210ENST00000621152 KANSL2Q9H9L4 492 aa24.57■■□□□ 1.52
SMC6-210ENST00000621152 PAK6Q9NQU5 681 aaPredicted RBP24.57■■□□□ 1.52
SMC6-210ENST00000621152 PATL2C9JE40 543 aaKnown RBP24.56■■□□□ 1.52
SMC6-210ENST00000621152 XRCC5P13010 732 aaKnown RBP24.56■■□□□ 1.52
SMC6-210ENST00000621152 EEF2P13639 858 aaKnown RBP24.56■■□□□ 1.52
SMC6-210ENST00000621152 GNAT2P19087 354 aa24.56■■□□□ 1.52
SMC6-210ENST00000621152 HDAC1Q13547 482 aaPredicted RBP24.56■■□□□ 1.52
SMC6-210ENST00000621152 MORN1Q5T089 497 aa24.56■■□□□ 1.52
SMC6-210ENST00000621152 TRIB2Q92519 343 aa24.56■■□□□ 1.52
SMC6-210ENST00000621152 USP6NLQ92738 828 aa24.56■■□□□ 1.52
SMC6-210ENST00000621152 SEC62Q99442 399 aaKnown RBP24.56■■□□□ 1.52
SMC6-210ENST00000621152 MKNK2Q9HBH9 465 aa24.56■■□□□ 1.52
SMC6-210ENST00000621152 HMX1Q9NP08 348 aaPredicted RBP24.56■■□□□ 1.52
SMC6-210ENST00000621152 BAZ2AQ9UIF9 1905 aaKnown RBP24.55■■□□□ 1.52
SMC6-210ENST00000621152 RGS2P41220 211 aa24.55■■□□□ 1.52
SMC6-210ENST00000621152 SPICE1Q8N0Z3 855 aa24.55■■□□□ 1.52
SMC6-210ENST00000621152 LPAR1Q92633 364 aa24.55■■□□□ 1.52
SMC6-210ENST00000621152 DPF3Q92784 378 aa24.55■■□□□ 1.52
SMC6-210ENST00000621152 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.55■■□□□ 1.524e-8■□□□□ 9.9
SMC6-210ENST00000621152 VCPKMTQ9H867 229 aa24.55■■□□□ 1.52
SMC6-210ENST00000621152 RPTORQ8N122 1335 aa24.55■■□□□ 1.52
SMC6-210ENST00000621152 MYH7P12883 1935 aa24.55■■□□□ 1.52
SMC6-210ENST00000621152 FARP2O94887 1054 aaPredicted RBP24.54■■□□□ 1.52
SMC6-210ENST00000621152 CAPN2P17655 700 aa24.54■■□□□ 1.52
SMC6-210ENST00000621152 TDO2P48775 406 aa24.54■■□□□ 1.52
SMC6-210ENST00000621152 UBE2Q1Q7Z7E8 422 aa24.54■■□□□ 1.52
SMC6-210ENST00000621152 TRMT44Q8IYL2 757 aaKnown RBP24.54■■□□□ 1.52
SMC6-210ENST00000621152 IFNL3Q8IZI9 196 aa24.53■■□□□ 1.52
SMC6-210ENST00000621152 CRISPLD2Q9H0B8 497 aa24.53■■□□□ 1.52
SMC6-210ENST00000621152 FLOT1O75955 427 aa24.52■■□□□ 1.52
SMC6-210ENST00000621152 RASA1P20936 1047 aa24.52■■□□□ 1.52
SMC6-210ENST00000621152 PTPREP23469 700 aa24.52■■□□□ 1.52
SMC6-210ENST00000621152 DSG3P32926 999 aa24.52■■□□□ 1.52
SMC6-210ENST00000621152 MAP2K5Q13163 448 aa24.52■■□□□ 1.52
SMC6-210ENST00000621152 AAMPQ13685 434 aa24.52■■□□□ 1.52
SMC6-210ENST00000621152 ZMYM1Q5SVZ6 1142 aa24.52■■□□□ 1.52
SMC6-210ENST00000621152 SAMD1Q6SPF0 538 aaPredicted RBP24.52■■□□□ 1.52
SMC6-210ENST00000621152 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.52■■□□□ 1.52
SMC6-210ENST00000621152 EPB41L4AQ9HCS5 686 aaPredicted RBP24.52■■□□□ 1.52
SMC6-210ENST00000621152 IVNS1ABPQ9Y6Y0 642 aa24.52■■□□□ 1.52
SMC6-210ENST00000621152 SALL3Q9BXA9 1300 aa24.52■■□□□ 1.52
SMC6-210ENST00000621152 SLC15A5A6NIM6 579 aa24.51■■□□□ 1.51
SMC6-210ENST00000621152 RAD21O60216 631 aa24.51■■□□□ 1.51
SMC6-210ENST00000621152 ZKSCAN1P17029 563 aaPredicted RBP24.51■■□□□ 1.51
SMC6-210ENST00000621152 CCL14Q16627 93 aa24.51■■□□□ 1.51
SMC6-210ENST00000621152 ZNF444Q8N0Y2 327 aaPredicted RBP24.51■■□□□ 1.51
SMC6-210ENST00000621152 HTATIP2Q9BUP3 242 aa24.51■■□□□ 1.51
SMC6-210ENST00000621152 NACAP1Q9BZK3 213 aa24.51■■□□□ 1.51
SMC6-210ENST00000621152 STAP2Q9UGK3 403 aa24.51■■□□□ 1.51
SMC6-210ENST00000621152 WDR46O15213 610 aaKnown RBP24.5■■□□□ 1.51
SMC6-210ENST00000621152 PRKAR2AP13861 404 aaKnown RBP24.5■■□□□ 1.51
SMC6-210ENST00000621152 PDE1AP54750 535 aa24.5■■□□□ 1.51
SMC6-210ENST00000621152 MOV10L1Q9BXT6 1211 aaKnown RBP24.5■■□□□ 1.51
SMC6-210ENST00000621152 RWDD1Q9H446 243 aaPredicted RBP24.5■■□□□ 1.51
SMC6-210ENST00000621152 BRCA2P51587 3418 aa24.49■■□□□ 1.51
SMC6-210ENST00000621152 H0YGN5 161 aa24.49■■□□□ 1.51
SMC6-210ENST00000621152 CACNB2Q08289 660 aaPredicted RBP24.49■■□□□ 1.51
SMC6-210ENST00000621152 PLS1Q14651 629 aa24.49■■□□□ 1.51
SMC6-210ENST00000621152 MAP3K21Q5TCX8 1036 aa24.49■■□□□ 1.51
SMC6-210ENST00000621152 EVI5LQ96CN4 794 aa24.49■■□□□ 1.51
SMC6-210ENST00000621152 APBA2Q99767 749 aa24.49■■□□□ 1.51
SMC6-210ENST00000621152 SPATC1LQ9H0A9 340 aa24.49■■□□□ 1.51
SMC6-210ENST00000621152 ZNF287Q9HBT7 754 aa24.49■■□□□ 1.51
SMC6-210ENST00000621152 GOPCQ9HD26 462 aa24.49■■□□□ 1.51
SMC6-210ENST00000621152 PLXNB2O15031 1838 aa24.49■■□□□ 1.51
SMC6-210ENST00000621152 PRDM1O75626 825 aa24.48■■□□□ 1.51
SMC6-210ENST00000621152 B4GALNT3Q6L9W6 998 aa24.48■■□□□ 1.51
SMC6-210ENST00000621152 MB21D1Q8N884 522 aa24.48■■□□□ 1.51
SMC6-210ENST00000621152 ATG4CQ96DT6 458 aa24.48■■□□□ 1.51
SMC6-210ENST00000621152 PAWRQ96IZ0 340 aaKnown RBP24.48■■□□□ 1.51
SMC6-210ENST00000621152 MKI67P46013 3256 aaKnown RBP24.48■■□□□ 1.51
SMC6-210ENST00000621152 EXOC6Q8TAG9 804 aa24.47■■□□□ 1.51
SMC6-210ENST00000621152 LNPKQ9C0E8 428 aa24.47■■□□□ 1.51
SMC6-210ENST00000621152 NAPBQ9H115 298 aa24.47■■□□□ 1.51
SMC6-210ENST00000621152 NYAP2Q9P242 653 aa24.47■■□□□ 1.51
SMC6-210ENST00000621152 STRNO43815 780 aa24.46■■□□□ 1.51
SMC6-210ENST00000621152 SLC34A2O95436 690 aa24.46■■□□□ 1.51
SMC6-210ENST00000621152 ERCC3P19447 782 aa24.46■■□□□ 1.51
SMC6-210ENST00000621152 GRB14Q14449 540 aa24.46■■□□□ 1.51
SMC6-210ENST00000621152 CCDC129Q6ZRS4 1044 aa24.46■■□□□ 1.51
SMC6-210ENST00000621152 DPP9Q86TI2 863 aa24.46■■□□□ 1.51
SMC6-210ENST00000621152 SHCBP1Q8NEM2 672 aa24.46■■□□□ 1.51
SMC6-210ENST00000621152 FBXO28Q9NVF7 368 aa24.46■■□□□ 1.51
SMC6-210ENST00000621152 CLIP2Q9UDT6 1046 aa24.46■■□□□ 1.51
SMC6-210ENST00000621152 IGHDP01880 384 aa24.45■■□□□ 1.5
SMC6-210ENST00000621152 SLC3A2P08195 630 aaKnown RBP24.45■■□□□ 1.5
SMC6-210ENST00000621152 FAM83BQ5T0W9 1011 aa24.45■■□□□ 1.5
SMC6-210ENST00000621152 MFSD14CQ5VZR4 134 aa24.45■■□□□ 1.5
SMC6-210ENST00000621152 NECAB2Q7Z6G3 386 aa24.45■■□□□ 1.5
SMC6-210ENST00000621152 NCAPG2Q86XI2 1143 aa24.45■■□□□ 1.5
SMC6-210ENST00000621152 NPLOC4Q8TAT6 608 aa24.45■■□□□ 1.5
SMC6-210ENST00000621152 FLRT1Q9NZU1 646 aa24.45■■□□□ 1.5
SMC6-210ENST00000621152 MYH8P13535 1937 aa24.45■■□□□ 1.5
SMC6-210ENST00000621152 ROBO3Q96MS0 1386 aa24.44■■□□□ 1.5
SMC6-210ENST00000621152 F5H6K3 240 aa24.44■■□□□ 1.5
SMC6-210ENST00000621152 HOXC6P09630 235 aa24.44■■□□□ 1.5
SMC6-210ENST00000621152 CCND3P30281 292 aaPredicted RBP24.44■■□□□ 1.5
SMC6-210ENST00000621152 PDE4BQ07343 736 aa24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms