RNA–Protein interactions for RNA: ENST00000617799.1

SBDS-205, Transcript of SBDS, ribosome maturation factor, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SBDS, Length 953 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-205ENST00000617799 SPICE1Q8N0Z3 855 aa20.25■□□□□ 0.83
SBDS-205ENST00000617799 C12orf42Q96LP6 360 aa20.25■□□□□ 0.83
SBDS-205ENST00000617799 VCPKMTQ9H867 229 aa20.25■□□□□ 0.83
SBDS-205ENST00000617799 IQCA1Q86XH1 822 aa20.24■□□□□ 0.83
SBDS-205ENST00000617799 LRRC47Q8N1G4 583 aaKnown RBP20.24■□□□□ 0.83
SBDS-205ENST00000617799 LPAR1Q92633 364 aa20.24■□□□□ 0.83
SBDS-205ENST00000617799 CFHR5Q9BXR6 569 aa20.24■□□□□ 0.83
SBDS-205ENST00000617799 TANGO6Q9C0B7 1094 aa20.24■□□□□ 0.83
SBDS-205ENST00000617799 R3HDMLQ9H3Y0 253 aa20.24■□□□□ 0.83
SBDS-205ENST00000617799 RPAP3Q9H6T3 665 aaPredicted RBP20.24■□□□□ 0.83
SBDS-205ENST00000617799 E7EWF7 191 aa20.23■□□□□ 0.83
SBDS-205ENST00000617799 SLC27A2O14975 620 aa20.23■□□□□ 0.83
SBDS-205ENST00000617799 CREB3L3Q68CJ9 461 aa20.23■□□□□ 0.83
SBDS-205ENST00000617799 ZKSCAN3Q9BRR0 538 aa20.23■□□□□ 0.83
SBDS-205ENST00000617799 ASCC2Q9H1I8 757 aaPredicted RBP20.23■□□□□ 0.83
SBDS-205ENST00000617799 IL17RBQ9NRM6 502 aa20.23■□□□□ 0.83
SBDS-205ENST00000617799 ISY1Q9ULR0 285 aaKnown RBP20.23■□□□□ 0.83
SBDS-205ENST00000617799 USP17L15C9J2P7 530 aa20.22■□□□□ 0.83
SBDS-205ENST00000617799 USP17L13C9JLJ4 530 aa20.22■□□□□ 0.83
SBDS-205ENST00000617799 USP17L11C9JVI0 530 aa20.22■□□□□ 0.83
SBDS-205ENST00000617799 USP17L18D6R9N7 530 aa20.22■□□□□ 0.83
SBDS-205ENST00000617799 USP17L22D6RA61 530 aa20.22■□□□□ 0.83
SBDS-205ENST00000617799 USP17L17D6RBQ6 530 aa20.22■□□□□ 0.83
SBDS-205ENST00000617799 USP17L19D6RCP7 530 aa20.22■□□□□ 0.83
SBDS-205ENST00000617799 USP17L20D6RJB6 530 aa20.22■□□□□ 0.83
SBDS-205ENST00000617799 GPR25O00155 361 aa20.22■□□□□ 0.83
SBDS-205ENST00000617799 MCCP23508 829 aa20.22■□□□□ 0.83
SBDS-205ENST00000617799 USP17L24Q0WX57 530 aa20.22■□□□□ 0.83
SBDS-205ENST00000617799 NCOA7Q8NI08 942 aa20.22■□□□□ 0.83
SBDS-205ENST00000617799 UBAC1Q9BSL1 405 aa20.22■□□□□ 0.83
SBDS-205ENST00000617799 UPF2Q9HAU5 1272 aaKnown RBP20.22■□□□□ 0.83
SBDS-205ENST00000617799 CPA4Q9UI42 421 aa20.22■□□□□ 0.83
SBDS-205ENST00000617799 TAF6LQ9Y6J9 622 aa20.22■□□□□ 0.83
SBDS-205ENST00000617799 TLR2O60603 784 aa20.21■□□□□ 0.83
SBDS-205ENST00000617799 NECTIN1Q15223 517 aa20.21■□□□□ 0.83
SBDS-205ENST00000617799 KIAA1755Q5JYT7 1200 aa20.21■□□□□ 0.83
SBDS-205ENST00000617799 SAMD1Q6SPF0 538 aaPredicted RBP20.21■□□□□ 0.83
SBDS-205ENST00000617799 TCP11L1Q9NUJ3 509 aa20.21■□□□□ 0.83
SBDS-205ENST00000617799 MTMR7Q9Y216 660 aa20.21■□□□□ 0.83
SBDS-205ENST00000617799 F5H6K3 240 aa20.2■□□□□ 0.82
SBDS-205ENST00000617799 WDR46O15213 610 aaKnown RBP20.2■□□□□ 0.82
SBDS-205ENST00000617799 FKTNO75072 461 aa20.2■□□□□ 0.82
SBDS-205ENST00000617799 NDUFB10O96000 172 aa20.2■□□□□ 0.82
SBDS-205ENST00000617799 HOXA7P31268 230 aaPredicted RBP20.2■□□□□ 0.82
SBDS-205ENST00000617799 KLRC3Q07444 240 aa20.2■□□□□ 0.82
SBDS-205ENST00000617799 CCDC178Q5BJE1 867 aa20.2■□□□□ 0.82
SBDS-205ENST00000617799 STOX1Q6ZVD7 989 aa20.2■□□□□ 0.82
SBDS-205ENST00000617799 NKX2-3Q8TAU0 364 aa20.2■□□□□ 0.82
SBDS-205ENST00000617799 MKL1Q969V6 931 aa20.2■□□□□ 0.82
SBDS-205ENST00000617799 CHMP4CQ96CF2 233 aa20.2■□□□□ 0.82
SBDS-205ENST00000617799 ZSWIM5Q9P217 1185 aa20.2■□□□□ 0.82
SBDS-205ENST00000617799 SYNPO2Q9UMS6 1093 aa20.2■□□□□ 0.82
SBDS-205ENST00000617799 TOP1P11387 765 aaKnown RBP20.19■□□□□ 0.82
SBDS-205ENST00000617799 ZKSCAN1P17029 563 aaPredicted RBP20.19■□□□□ 0.82
SBDS-205ENST00000617799 C8orf34Q49A92 452 aa20.19■□□□□ 0.82
SBDS-205ENST00000617799 ZNF296Q8WUU4 475 aaPredicted RBP20.19■□□□□ 0.82
SBDS-205ENST00000617799 ZSCAN10Q96SZ4 725 aaPredicted RBP20.19■□□□□ 0.82
SBDS-205ENST00000617799 NUP88Q99567 741 aaPredicted RBP20.19■□□□□ 0.82
SBDS-205ENST00000617799 FLOT1O75955 427 aa20.18■□□□□ 0.82
SBDS-205ENST00000617799 GCLCP48506 637 aaPredicted RBP20.18■□□□□ 0.82
SBDS-205ENST00000617799 HERVK_113P62684 666 aa20.18■□□□□ 0.82
SBDS-205ENST00000617799 SP3Q02447 781 aa20.18■□□□□ 0.82
SBDS-205ENST00000617799 NOM1Q5C9Z4 860 aaKnown RBP20.18■□□□□ 0.82
SBDS-205ENST00000617799 FAM83BQ5T0W9 1011 aa20.18■□□□□ 0.82
SBDS-205ENST00000617799 SLFN13Q68D06 897 aa20.18■□□□□ 0.82
SBDS-205ENST00000617799 CATSPERGQ6ZRH7 1159 aa20.18■□□□□ 0.82
SBDS-205ENST00000617799 ANKRD13CQ8N6S4 541 aa20.18■□□□□ 0.82
SBDS-205ENST00000617799 GMCL1P1Q8NEA9 526 aa20.18■□□□□ 0.82
SBDS-205ENST00000617799 P2RX7Q99572 595 aaKnown RBP20.18■□□□□ 0.82
SBDS-205ENST00000617799 TNKSO95271 1327 aa20.18■□□□□ 0.82
SBDS-205ENST00000617799 ADGRA2Q96PE1 1338 aa20.18■□□□□ 0.82
SBDS-205ENST00000617799 ERICH2A1L162 156 aa20.17■□□□□ 0.82
SBDS-205ENST00000617799 KRT32Q14532 448 aa20.17■□□□□ 0.82
SBDS-205ENST00000617799 SART3Q15020 963 aaKnown RBP20.17■□□□□ 0.82
SBDS-205ENST00000617799 CYB5R4Q7L1T6 521 aa20.17■□□□□ 0.82
SBDS-205ENST00000617799 IL27Q8NEV9 243 aa20.17■□□□□ 0.82
SBDS-205ENST00000617799 TTC14Q96N46 770 aa20.17■□□□□ 0.82
SBDS-205ENST00000617799 TMEM47Q9BQJ4 181 aa20.17■□□□□ 0.82
SBDS-205ENST00000617799 PAGR1Q9BTK6 254 aa20.17■□□□□ 0.82
SBDS-205ENST00000617799 PRDM10Q9NQV6 1147 aa20.17■□□□□ 0.82
SBDS-205ENST00000617799 ECM2O94769 699 aaPredicted RBP20.16■□□□□ 0.82
SBDS-205ENST00000617799 COG2Q14746 738 aa20.16■□□□□ 0.82
SBDS-205ENST00000617799 KIF22Q14807 665 aa20.16■□□□□ 0.82
SBDS-205ENST00000617799 CCDC96Q2M329 555 aa20.16■□□□□ 0.82
SBDS-205ENST00000617799 C17orf99Q6UX52 265 aa20.16■□□□□ 0.82
SBDS-205ENST00000617799 CHST3Q7LGC8 479 aa20.16■□□□□ 0.82
SBDS-205ENST00000617799 ENAHQ8N8S7 591 aaPredicted RBP20.16■□□□□ 0.82
SBDS-205ENST00000617799 GTF3C2Q8WUA4 911 aaPredicted RBP20.16■□□□□ 0.82
SBDS-205ENST00000617799 ERO1AQ96HE7 468 aa20.16■□□□□ 0.82
SBDS-205ENST00000617799 KAT14Q9H8E8 782 aa20.16■□□□□ 0.82
SBDS-205ENST00000617799 CASP8AP2Q9UKL3 1982 aa20.15■□□□□ 0.82
SBDS-205ENST00000617799 IFIT3O14879 490 aaKnown RBP20.15■□□□□ 0.82
SBDS-205ENST00000617799 BMP3P12645 472 aa20.15■□□□□ 0.82
SBDS-205ENST00000617799 SLC1A4P43007 532 aa20.15■□□□□ 0.82
SBDS-205ENST00000617799 NOVP48745 357 aa20.15■□□□□ 0.82
SBDS-205ENST00000617799 IKQ13123 557 aaPredicted RBP20.15■□□□□ 0.82
SBDS-205ENST00000617799 IFIT1BQ5T764 474 aaKnown RBP20.15■□□□□ 0.82
SBDS-205ENST00000617799 RCSD1Q6JBY9 416 aa20.15■□□□□ 0.82
SBDS-205ENST00000617799 DGKHQ86XP1 1220 aa20.15■□□□□ 0.82
SBDS-205ENST00000617799 CD99L2Q8TCZ2 262 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms