RNA–Protein interactions for RNA: ENST00000616939.4

GPN1-212, Transcript of GPN-loop GTPase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GPN1, Length 1,832 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-212ENST00000616939 USP49Q70CQ1 688 aa17.58■□□□□ 0.41
GPN1-212ENST00000616939 IFNL3Q8IZI9 196 aa17.58■□□□□ 0.41
GPN1-212ENST00000616939 VGLL2Q8N8G2 317 aa17.58■□□□□ 0.41
GPN1-212ENST00000616939 EPB41L4AQ9HCS5 686 aaPredicted RBP17.58■□□□□ 0.41
GPN1-212ENST00000616939 EIF5P55010 431 aaKnown RBP17.58■□□□□ 0.4
GPN1-212ENST00000616939 STX17P56962 302 aa17.58■□□□□ 0.4
GPN1-212ENST00000616939 ZC3H6P61129 1189 aaKnown RBP17.58■□□□□ 0.4
GPN1-212ENST00000616939 WTAPQ15007 396 aa17.58■□□□□ 0.4
GPN1-212ENST00000616939 EHBP1Q8NDI1 1231 aa17.58■□□□□ 0.4
GPN1-212ENST00000616939 AIDAQ96BJ3 306 aa17.58■□□□□ 0.4
GPN1-212ENST00000616939 SHANK3Q9BYB0 1731 aa17.58■□□□□ 0.4
GPN1-212ENST00000616939 NAPBQ9H115 298 aa17.58■□□□□ 0.4
GPN1-212ENST00000616939 RREB1Q92766 1687 aa17.58■□□□□ 0.4
GPN1-212ENST00000616939 RTL9Q8NET4 1388 aa17.58■□□□□ 0.4
GPN1-212ENST00000616939 A1BGP04217 495 aa17.57■□□□□ 0.4
GPN1-212ENST00000616939 XBP1P17861 261 aa17.57■□□□□ 0.4
GPN1-212ENST00000616939 NR5A1Q13285 461 aa17.57■□□□□ 0.4
GPN1-212ENST00000616939 KLHL10Q6JEL2 608 aa17.57■□□□□ 0.4
GPN1-212ENST00000616939 ZBTB38Q8NAP3 1195 aaPredicted RBP17.57■□□□□ 0.4
GPN1-212ENST00000616939 COG1Q8WTW3 980 aa17.57■□□□□ 0.4
GPN1-212ENST00000616939 CTNND2Q9UQB3 1225 aa17.57■□□□□ 0.4
GPN1-212ENST00000616939 EPN1Q9Y6I3 576 aaPredicted RBP17.57■□□□□ 0.4
GPN1-212ENST00000616939 A0A087WUV0 522 aaPredicted RBP17.56■□□□□ 0.4
GPN1-212ENST00000616939 N4BP3O15049 544 aa17.56■□□□□ 0.4
GPN1-212ENST00000616939 NDUFA10O95299 355 aa17.56■□□□□ 0.4
GPN1-212ENST00000616939 GNAT2P19087 354 aa17.56■□□□□ 0.4
GPN1-212ENST00000616939 WWC2Q6AWC2 1192 aa17.56■□□□□ 0.4
GPN1-212ENST00000616939 SUGP1Q8IWZ8 645 aaKnown RBP17.56■□□□□ 0.4
GPN1-212ENST00000616939 REXO2Q9Y3B8 237 aaKnown RBP17.56■□□□□ 0.4
GPN1-212ENST00000616939 A0A1W2PQC6 194 aa17.56■□□□□ 0.4
GPN1-212ENST00000616939 GTPBP6O43824 516 aaPredicted RBP17.56■□□□□ 0.4
GPN1-212ENST00000616939 DNAJC21Q5F1R6 531 aaKnown RBP17.56■□□□□ 0.4
GPN1-212ENST00000616939 MFSD6Q6ZSS7 791 aa17.56■□□□□ 0.4
GPN1-212ENST00000616939 PACS2Q86VP3 889 aa17.56■□□□□ 0.4
GPN1-212ENST00000616939 TTLL11Q8NHH1 800 aa17.56■□□□□ 0.4
GPN1-212ENST00000616939 OXER1Q8TDS5 423 aa17.56■□□□□ 0.4
GPN1-212ENST00000616939 SYMPKQ92797 1274 aaKnown RBP17.56■□□□□ 0.4
GPN1-212ENST00000616939 DNAJC7Q99615 494 aa17.56■□□□□ 0.4
GPN1-212ENST00000616939 CABP5Q9NP86 173 aa17.56■□□□□ 0.4
GPN1-212ENST00000616939 TACC3Q9Y6A5 838 aa17.56■□□□□ 0.4
GPN1-212ENST00000616939 PNPLA7Q6ZV29 1317 aa17.55■□□□□ 0.4
GPN1-212ENST00000616939 PCDH11XQ9BZA7 1347 aa17.55■□□□□ 0.4
GPN1-212ENST00000616939 PCDH11YQ9BZA8 1340 aa17.55■□□□□ 0.4
GPN1-212ENST00000616939 ANO9A1A5B4 782 aa17.55■□□□□ 0.4
GPN1-212ENST00000616939 IDH1O75874 414 aaKnown RBP17.55■□□□□ 0.4
GPN1-212ENST00000616939 KRT9P35527 623 aa17.55■□□□□ 0.4
GPN1-212ENST00000616939 KRT2P35908 639 aa17.55■□□□□ 0.4
GPN1-212ENST00000616939 AFMP43652 599 aa17.55■□□□□ 0.4
GPN1-212ENST00000616939 PAK1Q13153 545 aa17.55■□□□□ 0.4
GPN1-212ENST00000616939 SEMA3FQ13275 785 aa17.55■□□□□ 0.4
GPN1-212ENST00000616939 E2F4Q16254 413 aa17.55■□□□□ 0.4
GPN1-212ENST00000616939 TCP11X2Q5H9J9 407 aa17.55■□□□□ 0.4
GPN1-212ENST00000616939 NCAPH2Q6IBW4 605 aa17.55■□□□□ 0.4
GPN1-212ENST00000616939 NUP88Q99567 741 aaPredicted RBP17.55■□□□□ 0.4
GPN1-212ENST00000616939 SLF1Q9BQI6 1058 aa17.55■□□□□ 0.4
GPN1-212ENST00000616939 PHF20Q9BVI0 1012 aa17.55■□□□□ 0.4
GPN1-212ENST00000616939 RMND1Q9NWS8 449 aa17.55■□□□□ 0.4
GPN1-212ENST00000616939 ERICH2A1L162 156 aa17.54■□□□□ 0.4
GPN1-212ENST00000616939 CSB-PGBD3P0DP91 1061 aa17.54■□□□□ 0.4
GPN1-212ENST00000616939 GUCY2CP25092 1073 aa17.54■□□□□ 0.4
GPN1-212ENST00000616939 STIM1Q13586 685 aa17.54■□□□□ 0.4
GPN1-212ENST00000616939 NKX1-1Q15270 411 aaPredicted RBP17.54■□□□□ 0.4
GPN1-212ENST00000616939 ZNF654Q8IZM8 581 aa17.54■□□□□ 0.4
GPN1-212ENST00000616939 FANCBQ8NB91 859 aa17.54■□□□□ 0.4
GPN1-212ENST00000616939 RNF41Q9H4P4 317 aaPredicted RBP17.54■□□□□ 0.4
GPN1-212ENST00000616939 SAR1BQ9Y6B6 198 aa17.54■□□□□ 0.4
GPN1-212ENST00000616939 XDHP47989 1333 aa17.54■□□□□ 0.4
GPN1-212ENST00000616939 KCNJ18B7U540 433 aa17.54■□□□□ 0.4
GPN1-212ENST00000616939 ABL1P00519 1130 aa17.54■□□□□ 0.4
GPN1-212ENST00000616939 TFRCP02786 760 aaKnown RBP17.54■□□□□ 0.4
GPN1-212ENST00000616939 GTF2A1P52655 376 aaPredicted RBP17.54■□□□□ 0.4
GPN1-212ENST00000616939 CTDSPL2Q05D32 466 aa17.54■□□□□ 0.4
GPN1-212ENST00000616939 KCNJ12Q14500 433 aa17.54■□□□□ 0.4
GPN1-212ENST00000616939 IQCEQ6IPM2 695 aa17.54■□□□□ 0.4
GPN1-212ENST00000616939 OR8K1Q8NGG5 319 aa17.54■□□□□ 0.4
GPN1-212ENST00000616939 RBM33Q96EV2 1170 aaKnown RBP17.54■□□□□ 0.4
GPN1-212ENST00000616939 EPSTI1Q96J88 318 aa17.54■□□□□ 0.4
GPN1-212ENST00000616939 JRKLQ9Y4A0 524 aa17.54■□□□□ 0.4
GPN1-212ENST00000616939 GSG1L2A8MUP6 293 aa17.53■□□□□ 0.4
GPN1-212ENST00000616939 RNF225M0QZC1 329 aaPredicted RBP17.53■□□□□ 0.4
GPN1-212ENST00000616939 CCT6AP40227 531 aaKnown RBP17.53■□□□□ 0.4
GPN1-212ENST00000616939 KRT83P78385 493 aa17.53■□□□□ 0.4
GPN1-212ENST00000616939 IRX3P78415 501 aaPredicted RBP17.53■□□□□ 0.4
GPN1-212ENST00000616939 ATP2C1P98194 919 aaPredicted RBP17.53■□□□□ 0.4
GPN1-212ENST00000616939 ZNF658Q5TYW1 1059 aaPredicted RBP17.53■□□□□ 0.4
GPN1-212ENST00000616939 TADA2BQ86TJ2 420 aa17.53■□□□□ 0.4
GPN1-212ENST00000616939 SMARCC1Q92922 1105 aaPredicted RBP17.53■□□□□ 0.4
GPN1-212ENST00000616939 NHSL1Q5SYE7 1610 aa17.52■□□□□ 0.4
GPN1-212ENST00000616939 ANKRD18BA2A2Z9 1011 aa17.52■□□□□ 0.4
GPN1-212ENST00000616939 H7C1D1 291 aa17.52■□□□□ 0.4
GPN1-212ENST00000616939 PRPF3O43395 683 aaKnown RBP17.52■□□□□ 0.4
GPN1-212ENST00000616939 MBD4O95243 580 aa17.52■□□□□ 0.4
GPN1-212ENST00000616939 PDE8BO95263 885 aa17.52■□□□□ 0.4
GPN1-212ENST00000616939 ITIH3Q06033 890 aa17.52■□□□□ 0.4
GPN1-212ENST00000616939 MEA1Q16626 185 aa17.52■□□□□ 0.4
GPN1-212ENST00000616939 RRAGBQ5VZM2 374 aa17.52■□□□□ 0.4
GPN1-212ENST00000616939 PDXDC2PQ6P474 469 aa17.52■□□□□ 0.4
GPN1-212ENST00000616939 LDHAL6AQ6ZMR3 332 aa17.52■□□□□ 0.4
GPN1-212ENST00000616939 GBP6Q6ZN66 633 aa17.52■□□□□ 0.4
GPN1-212ENST00000616939 ZNF572Q7Z3I7 529 aaPredicted RBP17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms