RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 CDC37L1Q7L3B6 337 aa10.59□□□□□ -0.71
CLTCL1-208ENST00000615606 KRT26Q7Z3Y9 468 aa10.59□□□□□ -0.71
CLTCL1-208ENST00000615606 NOSTRINQ8IVI9 506 aa10.59□□□□□ -0.71
CLTCL1-208ENST00000615606 ZNF34Q8IZ26 560 aa10.59□□□□□ -0.71
CLTCL1-208ENST00000615606 NEK11Q8NG66 645 aa10.59□□□□□ -0.71
CLTCL1-208ENST00000615606 LEO1Q8WVC0 666 aaPredicted RBP10.59□□□□□ -0.71
CLTCL1-208ENST00000615606 UBXN4Q92575 508 aa10.59□□□□□ -0.71
CLTCL1-208ENST00000615606 FNBP1Q96RU3 617 aa10.59□□□□□ -0.71
CLTCL1-208ENST00000615606 TPCN1Q9ULQ1 816 aa10.59□□□□□ -0.71
CLTCL1-208ENST00000615606 TRAF5O00463 557 aa10.59□□□□□ -0.71
CLTCL1-208ENST00000615606 GDF11O95390 407 aa10.59□□□□□ -0.71
CLTCL1-208ENST00000615606 PDIA3P30101 505 aaKnown RBP10.59□□□□□ -0.71
CLTCL1-208ENST00000615606 KCTD2Q14681 263 aa10.59□□□□□ -0.71
CLTCL1-208ENST00000615606 MYSM1Q5VVJ2 828 aa10.59□□□□□ -0.71
CLTCL1-208ENST00000615606 OTUD6AQ7L8S5 288 aa10.59□□□□□ -0.71
CLTCL1-208ENST00000615606 MIER3Q7Z3K6 550 aa10.59□□□□□ -0.71
CLTCL1-208ENST00000615606 SLC16A10Q8TF71 515 aa10.59□□□□□ -0.71
CLTCL1-208ENST00000615606 MLXIPQ9HAP2 919 aa10.59□□□□□ -0.71
CLTCL1-208ENST00000615606 TESPA1A2RU30 521 aaPredicted RBP10.59□□□□□ -0.71
CLTCL1-208ENST00000615606 M0QZ92 97 aa10.59□□□□□ -0.71
CLTCL1-208ENST00000615606 POLR2DO15514 142 aaKnown RBP10.59□□□□□ -0.71
CLTCL1-208ENST00000615606 CALUO43852 315 aaPredicted RBP10.59□□□□□ -0.71
CLTCL1-208ENST00000615606 AOC3Q16853 763 aa10.59□□□□□ -0.71
CLTCL1-208ENST00000615606 AXDND1Q5T1B0 1012 aaPredicted RBP10.59□□□□□ -0.71
CLTCL1-208ENST00000615606 NEK8Q86SG6 692 aa10.59□□□□□ -0.71
CLTCL1-208ENST00000615606 LUZP1Q86V48 1076 aa10.59□□□□□ -0.71
CLTCL1-208ENST00000615606 SLFN12Q8IYM2 578 aa10.59□□□□□ -0.71
CLTCL1-208ENST00000615606 PI4K2BQ8TCG2 481 aa10.59□□□□□ -0.71
CLTCL1-208ENST00000615606 GBP3Q9H0R5 595 aa10.59□□□□□ -0.71
CLTCL1-208ENST00000615606 MACROD2A1Z1Q3 448 aa10.59□□□□□ -0.71
CLTCL1-208ENST00000615606 hCG_1984214I3L0E3 225 aa10.59□□□□□ -0.71
CLTCL1-208ENST00000615606 GPSM2P81274 684 aa10.59□□□□□ -0.71
CLTCL1-208ENST00000615606 FNBP4Q8N3X1 1017 aaPredicted RBP10.59□□□□□ -0.71
CLTCL1-208ENST00000615606 ZNF713Q8N859 430 aaPredicted RBP10.59□□□□□ -0.71
CLTCL1-208ENST00000615606 MSANTD4Q8NCY6 345 aa10.59□□□□□ -0.71
CLTCL1-208ENST00000615606 FERMT1Q9BQL6 677 aa10.59□□□□□ -0.71
CLTCL1-208ENST00000615606 PLVAPQ9BX97 442 aa10.59□□□□□ -0.71
CLTCL1-208ENST00000615606 RNF26Q9BY78 433 aaPredicted RBP10.59□□□□□ -0.71
CLTCL1-208ENST00000615606 EIF3JO75822 258 aaKnown RBP10.58□□□□□ -0.72
CLTCL1-208ENST00000615606 URI1O94763 535 aaPredicted RBP10.58□□□□□ -0.72
CLTCL1-208ENST00000615606 BMP3P12645 472 aa10.58□□□□□ -0.72
CLTCL1-208ENST00000615606 FOXO4P98177 505 aa10.58□□□□□ -0.72
CLTCL1-208ENST00000615606 MYL5Q02045 173 aa10.58□□□□□ -0.72
CLTCL1-208ENST00000615606 SF3B3Q15393 1217 aaKnown RBP10.58□□□□□ -0.72
CLTCL1-208ENST00000615606 CMTR1Q8N1G2 835 aaKnown RBP10.58□□□□□ -0.72
CLTCL1-208ENST00000615606 CTNNBL1Q8WYA6 563 aaPredicted RBP10.58□□□□□ -0.72
CLTCL1-208ENST00000615606 GLG1Q92896 1179 aa10.58□□□□□ -0.72
CLTCL1-208ENST00000615606 MROH2AA6NES4 1674 aa10.58□□□□□ -0.72
CLTCL1-208ENST00000615606 ABCC12Q96J65 1359 aa10.58□□□□□ -0.72
CLTCL1-208ENST00000615606 PRR5LQ6MZQ0 368 aa10.58□□□□□ -0.72
CLTCL1-208ENST00000615606 APOA5Q6Q788 366 aa10.58□□□□□ -0.72
CLTCL1-208ENST00000615606 TTC12Q9H892 705 aaPredicted RBP10.58□□□□□ -0.72
CLTCL1-208ENST00000615606 RGS12O14924 1447 aa10.58□□□□□ -0.72
CLTCL1-208ENST00000615606 FAM173BQ6P4H8 233 aa10.58□□□□□ -0.72
CLTCL1-208ENST00000615606 RNF181Q9P0P0 153 aa10.58□□□□□ -0.72
CLTCL1-208ENST00000615606 CEP83Q9Y592 693 aa10.58□□□□□ -0.72
CLTCL1-208ENST00000615606 PSDA5PKW4 1024 aaPredicted RBP10.58□□□□□ -0.72
CLTCL1-208ENST00000615606 DNA2P51530 1060 aa10.58□□□□□ -0.72
CLTCL1-208ENST00000615606 UBXN1Q04323 297 aa10.58□□□□□ -0.72
CLTCL1-208ENST00000615606 R3HDM1Q15032 1099 aaKnown RBP10.58□□□□□ -0.72
CLTCL1-208ENST00000615606 HERC4Q5GLZ8 1057 aaPredicted RBP10.58□□□□□ -0.72
CLTCL1-208ENST00000615606 STRBPQ96SI9 672 aaKnown RBP10.58□□□□□ -0.72
CLTCL1-208ENST00000615606 CETN3O15182 167 aa10.57□□□□□ -0.72
CLTCL1-208ENST00000615606 HARSP12081 509 aaKnown RBP10.57□□□□□ -0.72
CLTCL1-208ENST00000615606 TNNT1P13805 278 aa10.57□□□□□ -0.72
CLTCL1-208ENST00000615606 ITPK1Q13572 414 aa10.57□□□□□ -0.72
CLTCL1-208ENST00000615606 RABL6Q3YEC7 729 aaPredicted RBP10.57□□□□□ -0.72
CLTCL1-208ENST00000615606 CEP135Q66GS9 1140 aa10.57□□□□□ -0.72
CLTCL1-208ENST00000615606 SPICE1Q8N0Z3 855 aa10.57□□□□□ -0.72
CLTCL1-208ENST00000615606 ZNF277Q9NRM2 450 aaPredicted RBP10.57□□□□□ -0.72
CLTCL1-208ENST00000615606 CWC15Q9P013 229 aaKnown RBP10.57□□□□□ -0.72
CLTCL1-208ENST00000615606 CEMIPQ8WUJ3 1361 aa10.57□□□□□ -0.72
CLTCL1-208ENST00000615606 ASNSP08243 561 aa10.57□□□□□ -0.72
CLTCL1-208ENST00000615606 PRR16Q569H4 304 aa10.57□□□□□ -0.72
CLTCL1-208ENST00000615606 TMEM179Q6ZVK1 233 aa10.57□□□□□ -0.72
CLTCL1-208ENST00000615606 FAM160B2Q86V87 743 aa10.57□□□□□ -0.72
CLTCL1-208ENST00000615606 ZNF526Q8TF50 670 aaPredicted RBP10.57□□□□□ -0.72
CLTCL1-208ENST00000615606 GPKOWQ92917 476 aaPredicted RBP eCLIP10.57□□□□□ -0.72
CLTCL1-208ENST00000615606 NAA15Q9BXJ9 866 aaKnown RBP10.57□□□□□ -0.72
CLTCL1-208ENST00000615606 TRMT1Q9NXH9 659 aaKnown RBP10.57□□□□□ -0.72
CLTCL1-208ENST00000615606 MCM3P25205 808 aa10.57□□□□□ -0.72
CLTCL1-208ENST00000615606 PRPHP41219 470 aa10.57□□□□□ -0.72
CLTCL1-208ENST00000615606 CDK8P49336 464 aa10.57□□□□□ -0.72
CLTCL1-208ENST00000615606 BIRC3Q13489 604 aa10.57□□□□□ -0.72
CLTCL1-208ENST00000615606 DCAF17Q5H9S7 520 aaPredicted RBP10.57□□□□□ -0.72
CLTCL1-208ENST00000615606 WDR44Q5JSH3 913 aa10.57□□□□□ -0.72
CLTCL1-208ENST00000615606 RASEFQ8IZ41 740 aa10.57□□□□□ -0.72
CLTCL1-208ENST00000615606 CLSTN2Q9H4D0 955 aa10.57□□□□□ -0.72
CLTCL1-208ENST00000615606 SUGT1Q9Y2Z0 365 aa10.57□□□□□ -0.72
CLTCL1-208ENST00000615606 IGSF3O75054 1194 aa10.57□□□□□ -0.72
CLTCL1-208ENST00000615606 PRDX5P30044 214 aa10.57□□□□□ -0.72
CLTCL1-208ENST00000615606 INF2Q27J81 1249 aa10.57□□□□□ -0.72
CLTCL1-208ENST00000615606 SLC10A4Q96EP9 437 aa10.57□□□□□ -0.72
CLTCL1-208ENST00000615606 TEKT3Q9BXF9 490 aa10.57□□□□□ -0.72
CLTCL1-208ENST00000615606 RFX7Q2KHR2 1363 aa10.57□□□□□ -0.72
CLTCL1-208ENST00000615606 ZNF202O95125 648 aa10.56□□□□□ -0.72
CLTCL1-208ENST00000615606 OR52Z1P0C646 297 aa10.56□□□□□ -0.72
CLTCL1-208ENST00000615606 PLA2G4DQ86XP0 818 aa10.56□□□□□ -0.72
CLTCL1-208ENST00000615606 APOBEC3FQ8IUX4 373 aaKnown RBP10.56□□□□□ -0.72
CLTCL1-208ENST00000615606 TPH2Q8IWU9 490 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms