RNA–Protein interactions for RNA: ENST00000611598.1

PCDHGB1-202, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB1, Length 2,592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-202ENST00000611598 CASP8Q14790 479 aa17.12■□□□□ 0.33
PCDHGB1-202ENST00000611598 ZNF174Q15697 407 aa17.12■□□□□ 0.33
PCDHGB1-202ENST00000611598 FOXR1Q6PIV2 292 aa17.12■□□□□ 0.33
PCDHGB1-202ENST00000611598 CTAGE6Q86UF2 777 aa17.12■□□□□ 0.33
PCDHGB1-202ENST00000611598 CTAGE4Q8IX94 777 aa17.12■□□□□ 0.33
PCDHGB1-202ENST00000611598 LPIN2Q92539 896 aa17.12■□□□□ 0.33
PCDHGB1-202ENST00000611598 GSDMAQ96QA5 445 aa17.12■□□□□ 0.33
PCDHGB1-202ENST00000611598 SLF1Q9BQI6 1058 aa17.12■□□□□ 0.33
PCDHGB1-202ENST00000611598 TSPYL1Q9H0U9 437 aa17.12■□□□□ 0.33
PCDHGB1-202ENST00000611598 TAB2Q9NYJ8 693 aa17.12■□□□□ 0.33
PCDHGB1-202ENST00000611598 XDHP47989 1333 aa17.12■□□□□ 0.33
PCDHGB1-202ENST00000611598 N4BP3O15049 544 aa17.12■□□□□ 0.33
PCDHGB1-202ENST00000611598 LRRIQ3A6PVS8 624 aaPredicted RBP17.11■□□□□ 0.33
PCDHGB1-202ENST00000611598 NUP88Q99567 741 aaPredicted RBP17.11■□□□□ 0.33
PCDHGB1-202ENST00000611598 PRDM11Q9NQV5 511 aa17.11■□□□□ 0.33
PCDHGB1-202ENST00000611598 RNF216Q9NWF9 866 aaPredicted RBP17.11■□□□□ 0.33
PCDHGB1-202ENST00000611598 TMOD3Q9NYL9 352 aa17.11■□□□□ 0.33
PCDHGB1-202ENST00000611598 SPATA31A3Q5VYP0 1347 aa17.11■□□□□ 0.33
PCDHGB1-202ENST00000611598 ITIH6Q6UXX5 1313 aa17.11■□□□□ 0.33
PCDHGB1-202ENST00000611598 BCL9LQ86UU0 1499 aa17.11■□□□□ 0.33
PCDHGB1-202ENST00000611598 SEMA3EO15041 775 aa17.11■□□□□ 0.33
PCDHGB1-202ENST00000611598 AMPD2Q01433 879 aa17.11■□□□□ 0.33
PCDHGB1-202ENST00000611598 CT47A1Q5JQC4 288 aaPredicted RBP17.11■□□□□ 0.33
PCDHGB1-202ENST00000611598 SRLQ86TD4 932 aa17.11■□□□□ 0.33
PCDHGB1-202ENST00000611598 TMTC1Q8IUR5 882 aa17.11■□□□□ 0.33
PCDHGB1-202ENST00000611598 CCDC102AQ96A19 550 aa17.11■□□□□ 0.33
PCDHGB1-202ENST00000611598 UBAC1Q9BSL1 405 aa17.11■□□□□ 0.33
PCDHGB1-202ENST00000611598 CWC15Q9P013 229 aaKnown RBP17.11■□□□□ 0.33
PCDHGB1-202ENST00000611598 TNKSO95271 1327 aa17.1■□□□□ 0.33
PCDHGB1-202ENST00000611598 EIF3JO75822 258 aaKnown RBP17.1■□□□□ 0.33
PCDHGB1-202ENST00000611598 PLEKHA8P1O95397 391 aa17.1■□□□□ 0.33
PCDHGB1-202ENST00000611598 IL2RBP14784 551 aa17.1■□□□□ 0.33
PCDHGB1-202ENST00000611598 KRT2P35908 639 aa17.1■□□□□ 0.33
PCDHGB1-202ENST00000611598 CCDC51Q96ER9 411 aa17.1■□□□□ 0.33
PCDHGB1-202ENST00000611598 CHP1Q99653 195 aa17.1■□□□□ 0.33
PCDHGB1-202ENST00000611598 MTRQ99707 1265 aa17.1■□□□□ 0.33
PCDHGB1-202ENST00000611598 PHF20Q9BVI0 1012 aa17.1■□□□□ 0.33
PCDHGB1-202ENST00000611598 RNF26Q9BY78 433 aaPredicted RBP17.1■□□□□ 0.33
PCDHGB1-202ENST00000611598 TUBB2AQ13885 445 aa17.1■□□□□ 0.33
PCDHGB1-202ENST00000611598 SEC23AQ15436 765 aa17.1■□□□□ 0.33
PCDHGB1-202ENST00000611598 WHAMMP3Q1A5X7 153 aa17.1■□□□□ 0.33
PCDHGB1-202ENST00000611598 RRAGBQ5VZM2 374 aa17.1■□□□□ 0.33
PCDHGB1-202ENST00000611598 IQUBQ8NA54 791 aa17.1■□□□□ 0.33
PCDHGB1-202ENST00000611598 SDR42E1Q8WUS8 393 aa17.1■□□□□ 0.33
PCDHGB1-202ENST00000611598 TUBB2BQ9BVA1 445 aa17.1■□□□□ 0.33
PCDHGB1-202ENST00000611598 NACAP1Q9BZK3 213 aa17.1■□□□□ 0.33
PCDHGB1-202ENST00000611598 RASSF4Q9H2L5 321 aa17.1■□□□□ 0.33
PCDHGB1-202ENST00000611598 TFR2Q9UP52 801 aa17.1■□□□□ 0.33
PCDHGB1-202ENST00000611598 REXO2Q9Y3B8 237 aaKnown RBP17.1■□□□□ 0.33
PCDHGB1-202ENST00000611598 RRP15Q9Y3B9 282 aaKnown RBP17.1■□□□□ 0.33
PCDHGB1-202ENST00000611598 MINDY4BA8MYZ0 360 aa17.09■□□□□ 0.33
PCDHGB1-202ENST00000611598 COPB1P53618 953 aaKnown RBP17.09■□□□□ 0.33
PCDHGB1-202ENST00000611598 AKAP17AQ02040 695 aaKnown RBP17.09■□□□□ 0.33
PCDHGB1-202ENST00000611598 PPARAQ07869 468 aa17.09■□□□□ 0.33
PCDHGB1-202ENST00000611598 FUT2Q10981 343 aa17.09■□□□□ 0.33
PCDHGB1-202ENST00000611598 CYP26C1Q6V0L0 522 aa17.09■□□□□ 0.33
PCDHGB1-202ENST00000611598 LEKR1Q6ZMV7 388 aa17.09■□□□□ 0.33
PCDHGB1-202ENST00000611598 LIMA1Q9UHB6 759 aaKnown RBP17.09■□□□□ 0.33
PCDHGB1-202ENST00000611598 MYO6Q9UM54 1294 aa17.09■□□□□ 0.33
PCDHGB1-202ENST00000611598 MAPK8IP1Q9UQF2 711 aa17.09■□□□□ 0.33
PCDHGB1-202ENST00000611598 V9GY48 417 aaPredicted RBP17.09■□□□□ 0.33
PCDHGB1-202ENST00000611598 MYH6P13533 1939 aa17.09■□□□□ 0.33
PCDHGB1-202ENST00000611598 PDE8AO60658 829 aa17.09■□□□□ 0.33
PCDHGB1-202ENST00000611598 KRT9P35527 623 aa17.09■□□□□ 0.33
PCDHGB1-202ENST00000611598 TMTC2Q8N394 836 aa17.09■□□□□ 0.33
PCDHGB1-202ENST00000611598 HDAC6Q9UBN7 1215 aa17.09■□□□□ 0.33
PCDHGB1-202ENST00000611598 GUCA1BQ9UMX6 200 aa17.09■□□□□ 0.33
PCDHGB1-202ENST00000611598 ENC1O14682 589 aa17.08■□□□□ 0.33
PCDHGB1-202ENST00000611598 BCAMP50895 628 aa17.08■□□□□ 0.33
PCDHGB1-202ENST00000611598 PIP4K2BP78356 416 aa17.08■□□□□ 0.33
PCDHGB1-202ENST00000611598 PTGDRQ13258 359 aa17.08■□□□□ 0.33
PCDHGB1-202ENST00000611598 ADGRA1Q86SQ6 560 aa17.08■□□□□ 0.33
PCDHGB1-202ENST00000611598 PIGBQ92521 554 aa17.08■□□□□ 0.33
PCDHGB1-202ENST00000611598 FERMT2Q96AC1 680 aa17.08■□□□□ 0.33
PCDHGB1-202ENST00000611598 SLC5A1P13866 664 aa17.08■□□□□ 0.32
PCDHGB1-202ENST00000611598 NPY5RQ15761 445 aa17.08■□□□□ 0.32
PCDHGB1-202ENST00000611598 E2F4Q16254 413 aa17.08■□□□□ 0.32
PCDHGB1-202ENST00000611598 MSL3Q8N5Y2 521 aaKnown RBP17.08■□□□□ 0.32
PCDHGB1-202ENST00000611598 MYH3P11055 1940 aa17.08■□□□□ 0.32
PCDHGB1-202ENST00000611598 TOGARAM1Q9Y4F4 1720 aa17.07■□□□□ 0.32
PCDHGB1-202ENST00000611598 LRRC10BA6NIK2 292 aa17.07■□□□□ 0.32
PCDHGB1-202ENST00000611598 TCP11X2Q5H9J9 407 aa17.07■□□□□ 0.32
PCDHGB1-202ENST00000611598 TTC38Q5R3I4 469 aa17.07■□□□□ 0.32
PCDHGB1-202ENST00000611598 AEBP2Q6ZN18 517 aaPredicted RBP17.07■□□□□ 0.32
PCDHGB1-202ENST00000611598 ENAHQ8N8S7 591 aaPredicted RBP17.07■□□□□ 0.32
PCDHGB1-202ENST00000611598 PNPLA7Q6ZV29 1317 aa17.07■□□□□ 0.32
PCDHGB1-202ENST00000611598 DOCK2Q92608 1830 aa17.07■□□□□ 0.32
PCDHGB1-202ENST00000611598 KCNJ18B7U540 433 aa17.07■□□□□ 0.32
PCDHGB1-202ENST00000611598 STARD3NLO95772 234 aa17.07■□□□□ 0.32
PCDHGB1-202ENST00000611598 PAK1Q13153 545 aa17.07■□□□□ 0.32
PCDHGB1-202ENST00000611598 KCNJ12Q14500 433 aa17.07■□□□□ 0.32
PCDHGB1-202ENST00000611598 NELFBQ8WX92 580 aa17.07■□□□□ 0.32
PCDHGB1-202ENST00000611598 TNFRSF25Q93038 417 aa17.07■□□□□ 0.32
PCDHGB1-202ENST00000611598 RSPH14Q9UHP6 348 aa17.07■□□□□ 0.32
PCDHGB1-202ENST00000611598 IQSEC3Q9UPP2 1182 aaPredicted RBP17.07■□□□□ 0.32
PCDHGB1-202ENST00000611598 GDAQ9Y2T3 454 aa17.07■□□□□ 0.32
PCDHGB1-202ENST00000611598 MROH5Q6ZUA9 1318 aa17.07■□□□□ 0.32
PCDHGB1-202ENST00000611598 SHANK3Q9BYB0 1731 aa17.07■□□□□ 0.32
PCDHGB1-202ENST00000611598 CYP2D7A0A087X1C5 515 aa17.06■□□□□ 0.32
PCDHGB1-202ENST00000611598 ADAMTS3O15072 1205 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 152.6 ms