RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 IFNAR1P17181 557 aa8.18□□□□□ -1.1
CSDE1-218ENST00000610726 CLCN1P35523 988 aa8.18□□□□□ -1.1
CSDE1-218ENST00000610726 CYLC1P35663 651 aaPredicted RBP8.18□□□□□ -1.1
CSDE1-218ENST00000610726 LIFRP42702 1097 aa8.18□□□□□ -1.1
CSDE1-218ENST00000610726 NLRP12P59046 1061 aa8.18□□□□□ -1.1
CSDE1-218ENST00000610726 KARSQ15046 597 aaKnown RBP8.18□□□□□ -1.1
CSDE1-218ENST00000610726 EAPPQ56P03 285 aaPredicted RBP8.18□□□□□ -1.1
CSDE1-218ENST00000610726 DCAF17Q5H9S7 520 aaPredicted RBP8.18□□□□□ -1.1
CSDE1-218ENST00000610726 HAUS3Q68CZ6 603 aa8.18□□□□□ -1.1
CSDE1-218ENST00000610726 CC2D2BQ6DHV5 1058 aa8.18□□□□□ -1.1
CSDE1-218ENST00000610726 CSGALNACT2Q8N6G5 542 aa8.18□□□□□ -1.1
CSDE1-218ENST00000610726 MLKLQ8NB16 471 aa8.18□□□□□ -1.1
CSDE1-218ENST00000610726 KAZALD1Q96I82 304 aa8.18□□□□□ -1.1
CSDE1-218ENST00000610726 COA1Q9GZY4 146 aa8.18□□□□□ -1.1
CSDE1-218ENST00000610726 IL25Q9H293 177 aa8.18□□□□□ -1.1
CSDE1-218ENST00000610726 LZTFL1Q9NQ48 299 aa8.18□□□□□ -1.1
CSDE1-218ENST00000610726 LUC7L2Q9Y383 392 aaKnown RBP8.18□□□□□ -1.1
CSDE1-218ENST00000610726 GOLGA6L9A6NEM1 432 aa8.18□□□□□ -1.1
CSDE1-218ENST00000610726 ZBTB7AO95365 584 aa8.18□□□□□ -1.1
CSDE1-218ENST00000610726 ALAS1P13196 640 aa8.18□□□□□ -1.1
CSDE1-218ENST00000610726 CMA1P23946 247 aa8.18□□□□□ -1.1
CSDE1-218ENST00000610726 TAF3Q5VWG9 929 aa8.18□□□□□ -1.1
CSDE1-218ENST00000610726 GPIHBP1Q8IV16 184 aa8.18□□□□□ -1.1
CSDE1-218ENST00000610726 TTLL6Q8N841 843 aa8.18□□□□□ -1.1
CSDE1-218ENST00000610726 CCDC102AQ96A19 550 aa8.18□□□□□ -1.1
CSDE1-218ENST00000610726 CCDC42Q96M95 316 aa8.18□□□□□ -1.1
CSDE1-218ENST00000610726 CSF1RP07333 972 aa8.17□□□□□ -1.1
CSDE1-218ENST00000610726 KIF23Q02241 960 aaPredicted RBP8.17□□□□□ -1.1
CSDE1-218ENST00000610726 GPR162Q16538 588 aa8.17□□□□□ -1.1
CSDE1-218ENST00000610726 TMCO3Q6UWJ1 677 aa8.17□□□□□ -1.1
CSDE1-218ENST00000610726 C17orf53Q8N3J3 647 aaPredicted RBP8.17□□□□□ -1.1
CSDE1-218ENST00000610726 FAM212AQ96EL1 285 aa8.17□□□□□ -1.1
CSDE1-218ENST00000610726 EEF2KMTQ96G04 330 aa8.17□□□□□ -1.1
CSDE1-218ENST00000610726 CCDC17Q96LX7 622 aa8.17□□□□□ -1.1
CSDE1-218ENST00000610726 KIF2CQ99661 725 aa8.17□□□□□ -1.1
CSDE1-218ENST00000610726 RICTORQ6R327 1708 aa8.17□□□□□ -1.1
CSDE1-218ENST00000610726 ARHGEF28Q8N1W1 1705 aaKnown RBP8.17□□□□□ -1.1
CSDE1-218ENST00000610726 B4DLN1 442 aa8.17□□□□□ -1.1
CSDE1-218ENST00000610726 ZBED4O75132 1171 aa8.17□□□□□ -1.1
CSDE1-218ENST00000610726 PHACTR2O75167 634 aa8.17□□□□□ -1.1
CSDE1-218ENST00000610726 RFX5P48382 616 aaPredicted RBP8.17□□□□□ -1.1
CSDE1-218ENST00000610726 PRR16Q569H4 304 aa8.17□□□□□ -1.1
CSDE1-218ENST00000610726 CYB5R4Q7L1T6 521 aa8.17□□□□□ -1.1
CSDE1-218ENST00000610726 MIGA2Q7L4E1 593 aa8.17□□□□□ -1.1
CSDE1-218ENST00000610726 NEK8Q86SG6 692 aa8.17□□□□□ -1.1
CSDE1-218ENST00000610726 ALS2CR12Q96Q35 445 aa8.17□□□□□ -1.1
CSDE1-218ENST00000610726 PLA2G12BQ9BX93 195 aa8.17□□□□□ -1.1
CSDE1-218ENST00000610726 NEDD4P46934 1319 aa8.17□□□□□ -1.1
CSDE1-218ENST00000610726 SYNRGQ9UMZ2 1314 aa8.17□□□□□ -1.1
CSDE1-218ENST00000610726 USP32Q8NFA0 1604 aa8.17□□□□□ -1.1
CSDE1-218ENST00000610726 FAM196BA6NMK8 535 aa8.17□□□□□ -1.1
CSDE1-218ENST00000610726 FMNL1O95466 1100 aaPredicted RBP8.17□□□□□ -1.1
CSDE1-218ENST00000610726 CDC25AP30304 524 aa8.17□□□□□ -1.1
CSDE1-218ENST00000610726 CDK8P49336 464 aa8.17□□□□□ -1.1
CSDE1-218ENST00000610726 PAK1Q13153 545 aa8.17□□□□□ -1.1
CSDE1-218ENST00000610726 SLC39A14Q15043 492 aa8.17□□□□□ -1.1
CSDE1-218ENST00000610726 CCDC93Q567U6 631 aa8.17□□□□□ -1.1
CSDE1-218ENST00000610726 SLC27A3Q5K4L6 730 aa8.17□□□□□ -1.1
CSDE1-218ENST00000610726 FBXO11Q86XK2 927 aa8.17□□□□□ -1.1
CSDE1-218ENST00000610726 NELFCDQ8IXH7 590 aa8.17□□□□□ -1.1
CSDE1-218ENST00000610726 IGSF22Q8N9C0 903 aa8.17□□□□□ -1.1
CSDE1-218ENST00000610726 NEURL4Q96JN8 1562 aa8.17□□□□□ -1.1
CSDE1-218ENST00000610726 PGBD1Q96JS3 809 aa8.17□□□□□ -1.1
CSDE1-218ENST00000610726 NOC4LQ9BVI4 516 aaKnown RBP8.17□□□□□ -1.1
CSDE1-218ENST00000610726 CPVLQ9H3G5 476 aa8.17□□□□□ -1.1
CSDE1-218ENST00000610726 RTEL1Q9NZ71 1219 aa8.17□□□□□ -1.1
CSDE1-218ENST00000610726 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.17□□□□□ -1.1
CSDE1-218ENST00000610726 V9GYY5 206 aaPredicted RBP8.17□□□□□ -1.1
CSDE1-218ENST00000610726 POLR1AO95602 1720 aaPredicted RBP8.17□□□□□ -1.1
CSDE1-218ENST00000610726 NMT2O60551 498 aa8.17□□□□□ -1.1
CSDE1-218ENST00000610726 TTLL1O95922 423 aa8.17□□□□□ -1.1
CSDE1-218ENST00000610726 ZNF75DP51815 510 aa8.17□□□□□ -1.1
CSDE1-218ENST00000610726 CNNM4Q6P4Q7 775 aa8.17□□□□□ -1.1
CSDE1-218ENST00000610726 BARGINQ6ZT62 677 aa8.17□□□□□ -1.1
CSDE1-218ENST00000610726 NEK11Q8NG66 645 aa8.17□□□□□ -1.1
CSDE1-218ENST00000610726 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.17□□□□□ -1.1
CSDE1-218ENST00000610726 DCP1AQ9NPI6 582 aaPredicted RBP8.17□□□□□ -1.1
CSDE1-218ENST00000610726 PCDHA12Q9UN75 941 aa8.17□□□□□ -1.1
CSDE1-218ENST00000610726 DNM3Q9UQ16 869 aa8.17□□□□□ -1.1
CSDE1-218ENST00000610726 COL3A1P02461 1466 aaPredicted RBP8.16□□□□□ -1.1
CSDE1-218ENST00000610726 SPATA31A6Q5VVP1 1343 aa8.16□□□□□ -1.1
CSDE1-218ENST00000610726 CCDC169A6NNP5 214 aa8.16□□□□□ -1.1
CSDE1-218ENST00000610726 GSG1L2A8MUP6 293 aa8.16□□□□□ -1.1
CSDE1-218ENST00000610726 PLEKHA8P1O95397 391 aa8.16□□□□□ -1.1
CSDE1-218ENST00000610726 CCDC175P0C221 793 aa8.16□□□□□ -1.1
CSDE1-218ENST00000610726 HARSP12081 509 aaKnown RBP8.16□□□□□ -1.1
CSDE1-218ENST00000610726 GPSM2P81274 684 aa8.16□□□□□ -1.1
CSDE1-218ENST00000610726 COA7Q96BR5 231 aa8.16□□□□□ -1.1
CSDE1-218ENST00000610726 TTC14Q96N46 770 aa8.16□□□□□ -1.1
CSDE1-218ENST00000610726 PIGSQ96S52 555 aa8.16□□□□□ -1.1
CSDE1-218ENST00000610726 TAB2Q9NYJ8 693 aa8.16□□□□□ -1.1
CSDE1-218ENST00000610726 ARHGEF35A5YM69 484 aa8.16□□□□□ -1.1
CSDE1-218ENST00000610726 PRR5LQ6MZQ0 368 aa8.16□□□□□ -1.1
CSDE1-218ENST00000610726 STOX1Q6ZVD7 989 aa8.16□□□□□ -1.1
CSDE1-218ENST00000610726 TPH2Q8IWU9 490 aa8.16□□□□□ -1.1
CSDE1-218ENST00000610726 CTNNBL1Q8WYA6 563 aaPredicted RBP8.16□□□□□ -1.1
CSDE1-218ENST00000610726 HOOK2Q96ED9 719 aa8.16□□□□□ -1.1
CSDE1-218ENST00000610726 BRIP1Q9BX63 1249 aa8.16□□□□□ -1.1
CSDE1-218ENST00000610726 GUCA1BQ9UMX6 200 aa8.16□□□□□ -1.1
CSDE1-218ENST00000610726 GOLGA6L10A6NI86 522 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms