RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 CERS3Q8IU89 383 aa23.08■■□□□ 1.29
SSBP3-216ENST00000610401 CTAGE15A4D2H0 777 aa23.08■■□□□ 1.29
SSBP3-216ENST00000610401 PPP1R3GB7ZBB8 358 aa23.08■■□□□ 1.29
SSBP3-216ENST00000610401 CTAGE8P0CG41 777 aa23.08■■□□□ 1.29
SSBP3-216ENST00000610401 CTAGE6Q86UF2 777 aa23.08■■□□□ 1.29
SSBP3-216ENST00000610401 CTAGE4Q8IX94 777 aa23.08■■□□□ 1.29
SSBP3-216ENST00000610401 TXLNBQ8N3L3 684 aa23.08■■□□□ 1.29
SSBP3-216ENST00000610401 TTC38Q5R3I4 469 aa23.07■■□□□ 1.28
SSBP3-216ENST00000610401 NELFBQ8WX92 580 aa23.07■■□□□ 1.28
SSBP3-216ENST00000610401 AK7Q96M32 723 aa23.07■■□□□ 1.28
SSBP3-216ENST00000610401 CCDC196A0A1B0GTZ2 297 aa23.07■■□□□ 1.28
SSBP3-216ENST00000610401 XBP1P17861 261 aa23.07■■□□□ 1.28
SSBP3-216ENST00000610401 POLD4Q9HCU8 107 aa23.07■■□□□ 1.28
SSBP3-216ENST00000610401 RSPH14Q9UHP6 348 aa23.07■■□□□ 1.28
SSBP3-216ENST00000610401 FAM237AA0A1B0GTK4 181 aa23.07■■□□□ 1.28
SSBP3-216ENST00000610401 UIMC1Q96RL1 719 aa23.07■■□□□ 1.28
SSBP3-216ENST00000610401 KLK7P49862 253 aa23.06■■□□□ 1.28
SSBP3-216ENST00000610401 PKN1Q16512 942 aa23.06■■□□□ 1.28
SSBP3-216ENST00000610401 SPATA31A3Q5VYP0 1347 aa23.06■■□□□ 1.28
SSBP3-216ENST00000610401 MACROD2A1Z1Q3 448 aa23.06■■□□□ 1.28
SSBP3-216ENST00000610401 BEND6Q5SZJ8 279 aaPredicted RBP23.06■■□□□ 1.28
SSBP3-216ENST00000610401 CATIPQ7Z7H3 387 aa23.06■■□□□ 1.28
SSBP3-216ENST00000610401 CPVLQ9H3G5 476 aa23.06■■□□□ 1.28
SSBP3-216ENST00000610401 DUSP10Q9Y6W6 482 aa23.06■■□□□ 1.28
SSBP3-216ENST00000610401 CYP27A1Q02318 531 aa23.05■■□□□ 1.28
SSBP3-216ENST00000610401 HSP90B2PQ58FF3 399 aa23.05■■□□□ 1.28
SSBP3-216ENST00000610401 ESR2Q92731 530 aa23.05■■□□□ 1.28
SSBP3-216ENST00000610401 NAPGQ99747 312 aaPredicted RBP23.05■■□□□ 1.28
SSBP3-216ENST00000610401 WDR19Q8NEZ3 1342 aa23.05■■□□□ 1.28
SSBP3-216ENST00000610401 CCDC151A5D8V7 595 aa23.05■■□□□ 1.28
SSBP3-216ENST00000610401 USP17L12C9JPN9 530 aa23.05■■□□□ 1.28
SSBP3-216ENST00000610401 USP17L21D6R901 530 aa23.05■■□□□ 1.28
SSBP3-216ENST00000610401 ZNF185O15231 689 aa23.05■■□□□ 1.28
SSBP3-216ENST00000610401 CYP2D6P10635 497 aa23.05■■□□□ 1.28
SSBP3-216ENST00000610401 ARID4AP29374 1257 aaPredicted RBP23.05■■□□□ 1.28
SSBP3-216ENST00000610401 KANK3Q6NY19 840 aa23.05■■□□□ 1.28
SSBP3-216ENST00000610401 XDHP47989 1333 aa23.05■■□□□ 1.28
SSBP3-216ENST00000610401 MAGEB6P1A0A0J9YX57 407 aa23.05■■□□□ 1.28
SSBP3-216ENST00000610401 MTRQ99707 1265 aa23.05■■□□□ 1.28
SSBP3-216ENST00000610401 ABHD10Q9NUJ1 306 aa23.05■■□□□ 1.28
SSBP3-216ENST00000610401 FAM170AA1A519 330 aa23.04■■□□□ 1.28
SSBP3-216ENST00000610401 KCNJ18B7U540 433 aa23.04■■□□□ 1.28
SSBP3-216ENST00000610401 KCNJ12Q14500 433 aa23.04■■□□□ 1.28
SSBP3-216ENST00000610401 DNAJC21Q5F1R6 531 aaKnown RBP23.04■■□□□ 1.28
SSBP3-216ENST00000610401 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.04■■□□□ 1.28
SSBP3-216ENST00000610401 CAGE1Q8TC20 777 aa23.04■■□□□ 1.28
SSBP3-216ENST00000610401 PANX2Q96RD6 677 aa23.04■■□□□ 1.28
SSBP3-216ENST00000610401 FEZ2Q9UHY8 353 aaPredicted RBP23.04■■□□□ 1.28
SSBP3-216ENST00000610401 LRRIQ3A6PVS8 624 aaPredicted RBP23.04■■□□□ 1.28
SSBP3-216ENST00000610401 ERCC5P28715 1186 aaPredicted RBP23.04■■□□□ 1.28
SSBP3-216ENST00000610401 PMS1P54277 932 aaKnown RBP23.04■■□□□ 1.28
SSBP3-216ENST00000610401 CASP8Q14790 479 aa23.04■■□□□ 1.28
SSBP3-216ENST00000610401 TTC19Q6DKK2 380 aaPredicted RBP23.04■■□□□ 1.28
SSBP3-216ENST00000610401 LEKR1Q6ZMV7 388 aa23.04■■□□□ 1.28
SSBP3-216ENST00000610401 HDXQ7Z353 690 aa23.03■■□□□ 1.28
SSBP3-216ENST00000610401 HPS3Q969F9 1004 aa23.03■■□□□ 1.28
SSBP3-216ENST00000610401 PRCPP42785 496 aa23.03■■□□□ 1.28
SSBP3-216ENST00000610401 COPB1P53618 953 aaKnown RBP23.03■■□□□ 1.28
SSBP3-216ENST00000610401 NT5DC1Q5TFE4 455 aa23.03■■□□□ 1.28
SSBP3-216ENST00000610401 STAG1Q8WVM7 1258 aa23.03■■□□□ 1.28
SSBP3-216ENST00000610401 ZSCAN10Q96SZ4 725 aaPredicted RBP23.03■■□□□ 1.28
SSBP3-216ENST00000610401 AATFQ9NY61 560 aaKnown RBP eCLIP23.03■■□□□ 1.28
SSBP3-216ENST00000610401 CNGA4Q8IV77 575 aa23.03■■□□□ 1.28
SSBP3-216ENST00000610401 CEP112Q8N8E3 955 aa23.03■■□□□ 1.28
SSBP3-216ENST00000610401 TTC26A0AVF1 554 aa23.02■■□□□ 1.28
SSBP3-216ENST00000610401 CHRNDQ07001 517 aa23.02■■□□□ 1.28
SSBP3-216ENST00000610401 SMCR8Q8TEV9 937 aaPredicted RBP23.02■■□□□ 1.28
SSBP3-216ENST00000610401 GNL3LQ9NVN8 582 aaKnown RBP23.02■■□□□ 1.28
SSBP3-216ENST00000610401 BTG4Q9NY30 223 aa23.02■■□□□ 1.28
SSBP3-216ENST00000610401 IGHMBP2P38935 993 aaKnown RBP23.02■■□□□ 1.28
SSBP3-216ENST00000610401 PAK1Q13153 545 aa23.02■■□□□ 1.28
SSBP3-216ENST00000610401 TRIM28Q13263 835 aaKnown RBP23.02■■□□□ 1.28
SSBP3-216ENST00000610401 CCDC122Q5T0U0 273 aa23.02■■□□□ 1.28
SSBP3-216ENST00000610401 BRMS1Q9HCU9 246 aa23.02■■□□□ 1.28
SSBP3-216ENST00000610401 MYO6Q9UM54 1294 aa23.02■■□□□ 1.28
SSBP3-216ENST00000610401 ZPR1O75312 459 aa23.01■■□□□ 1.27
SSBP3-216ENST00000610401 ATP1A1P05023 1023 aaKnown RBP23.01■■□□□ 1.27
SSBP3-216ENST00000610401 IL17AQ16552 155 aa23.01■■□□□ 1.27
SSBP3-216ENST00000610401 KIAA1328Q86T90 577 aa23.01■■□□□ 1.27
SSBP3-216ENST00000610401 SRBD1Q8N5C6 995 aaKnown RBP23.01■■□□□ 1.27
SSBP3-216ENST00000610401 TFCP2L1Q9NZI6 479 aa23.01■■□□□ 1.27
SSBP3-216ENST00000610401 ABCC12Q96J65 1359 aa23.01■■□□□ 1.27
SSBP3-216ENST00000610401 RASGRP2Q7LDG7 609 aa23.01■■□□□ 1.27
SSBP3-216ENST00000610401 CADPS2Q86UW7 1296 aa23.01■■□□□ 1.27
SSBP3-216ENST00000610401 JADE2Q9NQC1 790 aa23.01■■□□□ 1.27
SSBP3-216ENST00000610401 SMARCAL1Q9NZC9 954 aa23.01■■□□□ 1.27
SSBP3-216ENST00000610401 FBXO3Q9UK99 471 aa23.01■■□□□ 1.27
SSBP3-216ENST00000610401 NIP7Q9Y221 180 aaKnown RBP eCLIP23.01■■□□□ 1.27
SSBP3-216ENST00000610401 MYO1CO00159 1063 aa23.01■■□□□ 1.27
SSBP3-216ENST00000610401 NKRFO15226 690 aaKnown RBP eCLIP23.01■■□□□ 1.27
SSBP3-216ENST00000610401 ERLIN1O75477 346 aa23.01■■□□□ 1.27
SSBP3-216ENST00000610401 EIF5P55010 431 aaKnown RBP23.01■■□□□ 1.27
SSBP3-216ENST00000610401 IQCA1Q86XH1 822 aa23.01■■□□□ 1.27
SSBP3-216ENST00000610401 MMS19Q96T76 1030 aa23.01■■□□□ 1.27
SSBP3-216ENST00000610401 STK36Q9NRP7 1315 aa23■■□□□ 1.27
SSBP3-216ENST00000610401 CYP19A1P11511 503 aaPredicted RBP23■■□□□ 1.27
SSBP3-216ENST00000610401 STAT6P42226 847 aa23■■□□□ 1.27
SSBP3-216ENST00000610401 TRIML1Q8N9V2 468 aa23■■□□□ 1.27
SSBP3-216ENST00000610401 TRIM47Q96LD4 638 aa23■■□□□ 1.27
SSBP3-216ENST00000610401 AGPAT5Q9NUQ2 364 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms