RNA–Protein interactions for RNA: ENST00000610354.4

CD9-212, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-212ENST00000610354 HERVK_113P62684 666 aa15.18■□□□□ 0.02
CD9-212ENST00000610354 IRX3P78415 501 aaPredicted RBP15.18■□□□□ 0.02
CD9-212ENST00000610354 USP17L24Q0WX57 530 aa15.18■□□□□ 0.02
CD9-212ENST00000610354 FAM47AQ5JRC9 791 aa15.18■□□□□ 0.02
CD9-212ENST00000610354 RPAP3Q9H6T3 665 aaPredicted RBP15.18■□□□□ 0.02
CD9-212ENST00000610354 KANSL2Q9H9L4 492 aa15.18■□□□□ 0.02
CD9-212ENST00000610354 DIAPH3Q9NSV4 1193 aa15.18■□□□□ 0.02
CD9-212ENST00000610354 MORF4L1Q9UBU8 362 aa15.18■□□□□ 0.02
CD9-212ENST00000610354 PTCH2Q9Y6C5 1203 aa15.18■□□□□ 0.02
CD9-212ENST00000610354 CCDC85CA6NKD9 419 aa15.17■□□□□ 0.02
CD9-212ENST00000610354 FGRP09769 529 aa15.17■□□□□ 0.02
CD9-212ENST00000610354 GCLCP48506 637 aaPredicted RBP15.17■□□□□ 0.02
CD9-212ENST00000610354 KIF22Q14807 665 aa15.17■□□□□ 0.02
CD9-212ENST00000610354 FAM110CQ1W6H9 321 aa15.17■□□□□ 0.02
CD9-212ENST00000610354 Q3C1V9 767 aa15.17■□□□□ 0.02
CD9-212ENST00000610354 NEDD1Q8NHV4 660 aa15.17■□□□□ 0.02
CD9-212ENST00000610354 VCPKMTQ9H867 229 aa15.17■□□□□ 0.02
CD9-212ENST00000610354 ARHGEF10LQ9HCE6 1279 aa15.17■□□□□ 0.02
CD9-212ENST00000610354 GABRQQ9UN88 632 aa15.17■□□□□ 0.02
CD9-212ENST00000610354 PLXNB2O15031 1838 aa15.17■□□□□ 0.02
CD9-212ENST00000610354 PLIN4Q96Q06 1357 aa15.17■□□□□ 0.02
CD9-212ENST00000610354 ZMYM6O95789 1325 aa15.17■□□□□ 0.02
CD9-212ENST00000610354 LAMA4Q16363 1823 aa15.17■□□□□ 0.02
CD9-212ENST00000610354 HIP1O00291 1037 aa15.17■□□□□ 0.02
CD9-212ENST00000610354 FMNL1O95466 1100 aaPredicted RBP15.17■□□□□ 0.02
CD9-212ENST00000610354 CHMLP26374 656 aa15.17■□□□□ 0.02
CD9-212ENST00000610354 ATP2B2Q01814 1243 aa15.17■□□□□ 0.02
CD9-212ENST00000610354 ZNF444Q8N0Y2 327 aaPredicted RBP15.17■□□□□ 0.02
CD9-212ENST00000610354 SPICE1Q8N0Z3 855 aa15.17■□□□□ 0.02
CD9-212ENST00000610354 NYAP2Q9P242 653 aa15.17■□□□□ 0.02
CD9-212ENST00000610354 SRRDQ9UH36 339 aa15.17■□□□□ 0.02
CD9-212ENST00000610354 HAND2P61296 217 aa15.16■□□□□ 0.02
CD9-212ENST00000610354 TFAP4Q01664 338 aa15.16■□□□□ 0.02
CD9-212ENST00000610354 PDE4BQ07343 736 aa15.16■□□□□ 0.02
CD9-212ENST00000610354 SP7Q8TDD2 431 aaPredicted RBP15.16■□□□□ 0.02
CD9-212ENST00000610354 CEP95Q96GE4 821 aa15.16■□□□□ 0.02
CD9-212ENST00000610354 MTMR4Q9NYA4 1195 aa15.16■□□□□ 0.02
CD9-212ENST00000610354 A0A0G2JMZ2 1700 aa15.15■□□□□ 0.02
CD9-212ENST00000610354 SPDYE16A6NNV3 312 aaPredicted RBP15.15■□□□□ 0.02
CD9-212ENST00000610354 ORC4O43929 436 aa15.15■□□□□ 0.02
CD9-212ENST00000610354 GNRH1P01148 92 aa15.15■□□□□ 0.02
CD9-212ENST00000610354 SLC3A2P08195 630 aaKnown RBP15.15■□□□□ 0.02
CD9-212ENST00000610354 FCGRTP55899 365 aa15.15■□□□□ 0.02
CD9-212ENST00000610354 ARHGEF6Q15052 776 aa15.15■□□□□ 0.02
CD9-212ENST00000610354 LBX2Q6XYB7 198 aa15.15■□□□□ 0.02
CD9-212ENST00000610354 TBC1D10CQ8IV04 446 aa15.15■□□□□ 0.02
CD9-212ENST00000610354 MKL1Q969V6 931 aa15.15■□□□□ 0.02
CD9-212ENST00000610354 ZNF287Q9HBT7 754 aa15.15■□□□□ 0.02
CD9-212ENST00000610354 IL17RBQ9NRM6 502 aa15.15■□□□□ 0.02
CD9-212ENST00000610354 BTBD7Q9P203 1132 aa15.15■□□□□ 0.02
CD9-212ENST00000610354 CLIP2Q9UDT6 1046 aa15.15■□□□□ 0.02
CD9-212ENST00000610354 COL11A1P12107 1806 aaPredicted RBP15.14■□□□□ 0.01
CD9-212ENST00000610354 NMT2O60551 498 aa15.14■□□□□ 0.01
CD9-212ENST00000610354 MFAP1P55081 439 aaKnown RBP15.14■□□□□ 0.01
CD9-212ENST00000610354 PRKCZQ05513 592 aa15.14■□□□□ 0.01
CD9-212ENST00000610354 LPAR1Q92633 364 aa15.14■□□□□ 0.01
CD9-212ENST00000610354 ARMC5Q96C12 935 aa15.14■□□□□ 0.01
CD9-212ENST00000610354 PAGR1Q9BTK6 254 aa15.14■□□□□ 0.01
CD9-212ENST00000610354 DSCC1Q9BVC3 393 aa15.14■□□□□ 0.01
CD9-212ENST00000610354 PORCNQ9H237 461 aa15.14■□□□□ 0.01
CD9-212ENST00000610354 SH2D4AQ9H788 454 aa15.14■□□□□ 0.01
CD9-212ENST00000610354 MYPNQ86TC9 1320 aa15.13■□□□□ 0.01
CD9-212ENST00000610354 WDR46O15213 610 aaKnown RBP15.13■□□□□ 0.01
CD9-212ENST00000610354 TSPY3P0CV98 308 aa15.13■□□□□ 0.01
CD9-212ENST00000610354 TSPY8P0CW00 308 aa15.13■□□□□ 0.01
CD9-212ENST00000610354 PRMT2P55345 433 aa15.13■□□□□ 0.01
CD9-212ENST00000610354 ERVK-9P63128 1117 aa15.13■□□□□ 0.01
CD9-212ENST00000610354 ERVK-24P63145 666 aa15.13■□□□□ 0.01
CD9-212ENST00000610354 PTH1RQ03431 593 aa15.13■□□□□ 0.01
CD9-212ENST00000610354 COG2Q14746 738 aa15.13■□□□□ 0.01
CD9-212ENST00000610354 GPRC5AQ8NFJ5 357 aa15.13■□□□□ 0.01
CD9-212ENST00000610354 CCDC136Q96JN2 1154 aa15.13■□□□□ 0.01
CD9-212ENST00000610354 NUP88Q99567 741 aaPredicted RBP15.13■□□□□ 0.01
CD9-212ENST00000610354 FBXO28Q9NVF7 368 aa15.13■□□□□ 0.01
CD9-212ENST00000610354 GJD2Q9UKL4 321 aa15.13■□□□□ 0.01
CD9-212ENST00000610354 RABGAP1Q9Y3P9 1069 aa15.13■□□□□ 0.01
CD9-212ENST00000610354 KIAA0100Q14667 2235 aaKnown RBP15.12■□□□□ 0.01
CD9-212ENST00000610354 F5H6K3 240 aa15.12■□□□□ 0.01
CD9-212ENST00000610354 TNPO2O14787 897 aaKnown RBP15.12■□□□□ 0.01
CD9-212ENST00000610354 RANBP6O60518 1105 aaKnown RBP15.12■□□□□ 0.01
CD9-212ENST00000610354 NDUFB10O96000 172 aa15.12■□□□□ 0.01
CD9-212ENST00000610354 HOXD10P28358 340 aa15.12■□□□□ 0.01
CD9-212ENST00000610354 NOVP48745 357 aa15.12■□□□□ 0.01
CD9-212ENST00000610354 FLT3LGP49771 235 aa15.12■□□□□ 0.01
CD9-212ENST00000610354 SOX10P56693 466 aa15.12■□□□□ 0.01
CD9-212ENST00000610354 KLRC3Q07444 240 aa15.12■□□□□ 0.01
CD9-212ENST00000610354 FAM83BQ5T0W9 1011 aa15.12■□□□□ 0.01
CD9-212ENST00000610354 AKNAD1Q5T1N1 836 aa15.12■□□□□ 0.01
CD9-212ENST00000610354 LRRC47Q8N1G4 583 aaKnown RBP15.12■□□□□ 0.01
CD9-212ENST00000610354 SH3TC2Q8TF17 1288 aa15.12■□□□□ 0.01
CD9-212ENST00000610354 GTF3C2Q8WUA4 911 aaPredicted RBP15.12■□□□□ 0.01
CD9-212ENST00000610354 STAG1Q8WVM7 1258 aa15.12■□□□□ 0.01
CD9-212ENST00000610354 ATG4CQ96DT6 458 aa15.12■□□□□ 0.01
CD9-212ENST00000610354 TANGO6Q9C0B7 1094 aa15.12■□□□□ 0.01
CD9-212ENST00000610354 GOPCQ9HD26 462 aa15.12■□□□□ 0.01
CD9-212ENST00000610354 NEDD4P46934 1319 aa15.11■□□□□ 0.01
CD9-212ENST00000610354 RAD50Q92878 1312 aa15.11■□□□□ 0.01
CD9-212ENST00000610354 TSPY2A6NKD2 308 aa15.11■□□□□ 0.01
CD9-212ENST00000610354 SGSM2O43147 1006 aa15.11■□□□□ 0.01
CD9-212ENST00000610354 TTLL1O95922 423 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms