RNA–Protein interactions for RNA: ENST00000602955.1

AC004542.1-201, humanhuman

TSL 3 BASIC

Gene AC004542.1, Length 264 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004542.1-201ENST00000602955 INTS7Q9NVH2 962 aaKnown RBP5.75□□□□□ -1.49
AC004542.1-201ENST00000602955 FAM86C1Q9NVL1 165 aa5.75□□□□□ -1.49
AC004542.1-201ENST00000602955 LRP2BPQ9P2M1 347 aa5.75□□□□□ -1.49
AC004542.1-201ENST00000602955 APEX2Q9UBZ4 518 aa5.75□□□□□ -1.49
AC004542.1-201ENST00000602955 AP4E1Q9UPM8 1137 aa5.75□□□□□ -1.49
AC004542.1-201ENST00000602955 ERBB4Q15303 1308 aa5.74□□□□□ -1.49
AC004542.1-201ENST00000602955 SPDYE3A6NKU9 549 aa5.74□□□□□ -1.49
AC004542.1-201ENST00000602955 WISP1O95388 367 aa5.74□□□□□ -1.49
AC004542.1-201ENST00000602955 TIAF1O95411 115 aa5.74□□□□□ -1.49
AC004542.1-201ENST00000602955 PABPC1P11940 636 aaKnown RBP5.74□□□□□ -1.49
AC004542.1-201ENST00000602955 AMPD1P23109 780 aa5.74□□□□□ -1.49
AC004542.1-201ENST00000602955 EXOSC10Q01780 885 aaKnown RBP5.74□□□□□ -1.49
AC004542.1-201ENST00000602955 SOX4Q06945 474 aaPredicted RBP5.74□□□□□ -1.49
AC004542.1-201ENST00000602955 CCDC144CPQ8IYA2 1237 aa5.74□□□□□ -1.49
AC004542.1-201ENST00000602955 FMR1NBQ8N0W7 255 aaPredicted RBP5.74□□□□□ -1.49
AC004542.1-201ENST00000602955 LRRN4CLQ8ND94 238 aa5.74□□□□□ -1.49
AC004542.1-201ENST00000602955 PPP1R13LQ8WUF5 828 aa5.74□□□□□ -1.49
AC004542.1-201ENST00000602955 OSBP2Q969R2 916 aa5.74□□□□□ -1.49
AC004542.1-201ENST00000602955 CLUHP3Q96NS8 147 aa5.74□□□□□ -1.49
AC004542.1-201ENST00000602955 CEP89Q96ST8 783 aa5.74□□□□□ -1.49
AC004542.1-201ENST00000602955 FAM126AQ9BYI3 521 aaPredicted RBP5.74□□□□□ -1.49
AC004542.1-201ENST00000602955 FOXQ1Q9C009 403 aa5.74□□□□□ -1.49
AC004542.1-201ENST00000602955 CYP4F12Q9HCS2 524 aa5.74□□□□□ -1.49
AC004542.1-201ENST00000602955 WHRNQ9P202 907 aa5.74□□□□□ -1.49
AC004542.1-201ENST00000602955 MAGEC2Q9UBF1 373 aaPredicted RBP5.74□□□□□ -1.49
AC004542.1-201ENST00000602955 ALG1L2C9J202 215 aa5.73□□□□□ -1.49
AC004542.1-201ENST00000602955 PRODHO43272 600 aa5.73□□□□□ -1.49
AC004542.1-201ENST00000602955 PPM1BO75688 479 aa5.73□□□□□ -1.49
AC004542.1-201ENST00000602955 LRIG2O94898 1065 aa5.73□□□□□ -1.49
AC004542.1-201ENST00000602955 HOXB4P17483 251 aaPredicted RBP5.73□□□□□ -1.49
AC004542.1-201ENST00000602955 PMLP29590 882 aa5.73□□□□□ -1.49
AC004542.1-201ENST00000602955 DGKGP49619 791 aa5.73□□□□□ -1.49
AC004542.1-201ENST00000602955 RAC1P63000 192 aa5.73□□□□□ -1.49
AC004542.1-201ENST00000602955 RNF4P78317 190 aa5.73□□□□□ -1.49
AC004542.1-201ENST00000602955 MAP7Q14244 749 aa5.73□□□□□ -1.49
AC004542.1-201ENST00000602955 HSP90AB2PQ58FF8 381 aa5.73□□□□□ -1.49
AC004542.1-201ENST00000602955 TRIM61Q5EBN2 209 aa5.73□□□□□ -1.49
AC004542.1-201ENST00000602955 CT47A1Q5JQC4 288 aaPredicted RBP5.73□□□□□ -1.49
AC004542.1-201ENST00000602955 ODR4Q5SWX8 454 aa5.73□□□□□ -1.49
AC004542.1-201ENST00000602955 TRAPPC3LQ5T215 181 aa5.73□□□□□ -1.49
AC004542.1-201ENST00000602955 NBPF12Q5TAG4 269 aaPredicted RBP5.73□□□□□ -1.49
AC004542.1-201ENST00000602955 DCAF15Q66K64 600 aa5.73□□□□□ -1.49
AC004542.1-201ENST00000602955 NSMFQ6X4W1 530 aa5.73□□□□□ -1.49
AC004542.1-201ENST00000602955 Q6ZNB5 142 aa5.73□□□□□ -1.49
AC004542.1-201ENST00000602955 ARMCX6Q7L4S7 300 aa5.73□□□□□ -1.49
AC004542.1-201ENST00000602955 DDX42Q86XP3 938 aaKnown RBP eCLIP5.73□□□□□ -1.49
AC004542.1-201ENST00000602955 AFAP1L2Q8N4X5 818 aa5.73□□□□□ -1.49
AC004542.1-201ENST00000602955 BVESQ8NE79 360 aa5.73□□□□□ -1.49
AC004542.1-201ENST00000602955 DNAJB8Q8NHS0 232 aa5.73□□□□□ -1.49
AC004542.1-201ENST00000602955 JDP2Q8WYK2 163 aa5.73□□□□□ -1.49
AC004542.1-201ENST00000602955 MRGPRX3Q96LB0 322 aa5.73□□□□□ -1.49
AC004542.1-201ENST00000602955 FGD4Q96M96 766 aa5.73□□□□□ -1.49
AC004542.1-201ENST00000602955 TARS2Q9BW92 718 aaKnown RBP5.73□□□□□ -1.49
AC004542.1-201ENST00000602955 PIDD1Q9HB75 910 aa5.73□□□□□ -1.49
AC004542.1-201ENST00000602955 MCM8Q9UJA3 840 aa5.73□□□□□ -1.49
AC004542.1-201ENST00000602955 G3BP2Q9UN86 482 aaKnown RBP5.73□□□□□ -1.49
AC004542.1-201ENST00000602955 ZNF451Q9Y4E5 1061 aa5.73□□□□□ -1.49
AC004542.1-201ENST00000602955 COL17A1Q9UMD9 1497 aaPredicted RBP5.72□□□□□ -1.49
AC004542.1-201ENST00000602955 A0A0A0MRY4 1105 aa5.72□□□□□ -1.49
AC004542.1-201ENST00000602955 NOP56O00567 594 aaKnown RBP5.72□□□□□ -1.49
AC004542.1-201ENST00000602955 SHOXO15266 292 aa5.72□□□□□ -1.49
AC004542.1-201ENST00000602955 SDSP20132 328 aa5.72□□□□□ -1.49
AC004542.1-201ENST00000602955 NFKB2Q00653 900 aa5.72□□□□□ -1.49
AC004542.1-201ENST00000602955 BRDTQ58F21 947 aaPredicted RBP5.72□□□□□ -1.49
AC004542.1-201ENST00000602955 ACAD11Q709F0 780 aa5.72□□□□□ -1.49
AC004542.1-201ENST00000602955 DYMQ7RTS9 669 aa5.72□□□□□ -1.49
AC004542.1-201ENST00000602955 LRRTM3Q86VH5 581 aa5.72□□□□□ -1.49
AC004542.1-201ENST00000602955 MFSD2AQ8NA29 543 aa5.72□□□□□ -1.49
AC004542.1-201ENST00000602955 RCC1LQ96I51 464 aaKnown RBP5.72□□□□□ -1.49
AC004542.1-201ENST00000602955 ZNF512BQ96KM6 892 aaPredicted RBP5.72□□□□□ -1.49
AC004542.1-201ENST00000602955 MKRN2Q9H000 416 aaKnown RBP5.72□□□□□ -1.49
AC004542.1-201ENST00000602955 FAN1Q9Y2M0 1017 aa5.72□□□□□ -1.49
AC004542.1-201ENST00000602955 SUGT1Q9Y2Z0 365 aa5.72□□□□□ -1.49
AC004542.1-201ENST00000602955 EMC9Q9Y3B6 208 aa5.72□□□□□ -1.49
AC004542.1-201ENST00000602955 A0A087WZG4 1122 aa5.71□□□□□ -1.5
AC004542.1-201ENST00000602955 TERTO14746 1132 aaKnown RBP5.71□□□□□ -1.5
AC004542.1-201ENST00000602955 RNGTTO60942 597 aaKnown RBP5.71□□□□□ -1.5
AC004542.1-201ENST00000602955 DRD2P14416 443 aa5.71□□□□□ -1.5
AC004542.1-201ENST00000602955 CD247P20963 164 aa5.71□□□□□ -1.5
AC004542.1-201ENST00000602955 GRIA2P42262 883 aa5.71□□□□□ -1.5
AC004542.1-201ENST00000602955 ASPAP45381 313 aa5.71□□□□□ -1.5
AC004542.1-201ENST00000602955 EVA1CP58658 441 aa5.71□□□□□ -1.5
AC004542.1-201ENST00000602955 AUHQ13825 339 aaKnown RBP5.71□□□□□ -1.5
AC004542.1-201ENST00000602955 POMZP3Q6PJE2 187 aa5.71□□□□□ -1.5
AC004542.1-201ENST00000602955 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.71□□□□□ -1.5
AC004542.1-201ENST00000602955 ADAT2Q7Z6V5 191 aaKnown RBP5.71□□□□□ -1.5
AC004542.1-201ENST00000602955 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.71□□□□□ -1.5
AC004542.1-201ENST00000602955 SMYD4Q8IYR2 804 aaPredicted RBP5.71□□□□□ -1.5
AC004542.1-201ENST00000602955 C7orf61Q8IZ16 206 aa5.71□□□□□ -1.5
AC004542.1-201ENST00000602955 PPM1KQ8N3J5 372 aa5.71□□□□□ -1.5
AC004542.1-201ENST00000602955 ARHGEF39Q8N4T4 335 aa5.71□□□□□ -1.5
AC004542.1-201ENST00000602955 CRACR2BQ8N4Y2 399 aaPredicted RBP5.71□□□□□ -1.5
AC004542.1-201ENST00000602955 UBR7Q8N806 425 aa5.71□□□□□ -1.5
AC004542.1-201ENST00000602955 C2CD4AQ8NCU7 369 aaPredicted RBP5.71□□□□□ -1.5
AC004542.1-201ENST00000602955 SLC16A10Q8TF71 515 aa5.71□□□□□ -1.5
AC004542.1-201ENST00000602955 IRF7Q92985 503 aa5.71□□□□□ -1.5
AC004542.1-201ENST00000602955 PPP1R14AQ96A00 147 aa5.71□□□□□ -1.5
AC004542.1-201ENST00000602955 VWCEQ96DN2 955 aa5.71□□□□□ -1.5
AC004542.1-201ENST00000602955 KREMEN1Q96MU8 473 aa5.71□□□□□ -1.5
AC004542.1-201ENST00000602955 LGR4Q9BXB1 951 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms