RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 ABCC1P33527 1531 aa5.76□□□□□ -1.49
SPTBN1-206ENST00000602898 PRPF40AO75400 957 aaKnown RBP5.75□□□□□ -1.49
SPTBN1-206ENST00000602898 COPAP53621 1224 aa5.75□□□□□ -1.49
SPTBN1-206ENST00000602898 EHHADHQ08426 723 aa5.75□□□□□ -1.49
SPTBN1-206ENST00000602898 AGERQ15109 404 aa5.75□□□□□ -1.49
SPTBN1-206ENST00000602898 PARP10Q53GL7 1025 aa5.75□□□□□ -1.49
SPTBN1-206ENST00000602898 CCDC158Q5M9N0 1113 aa5.75□□□□□ -1.49
SPTBN1-206ENST00000602898 C1orf228Q6PIY5 440 aa5.75□□□□□ -1.49
SPTBN1-206ENST00000602898 LHFPL2Q6ZUX7 228 aa5.75□□□□□ -1.49
SPTBN1-206ENST00000602898 ZNF354CQ86Y25 554 aa5.75□□□□□ -1.49
SPTBN1-206ENST00000602898 ANKMY2Q8IV38 441 aa5.75□□□□□ -1.49
SPTBN1-206ENST00000602898 ELOA2Q8IYF1 753 aaPredicted RBP5.75□□□□□ -1.49
SPTBN1-206ENST00000602898 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.75□□□□□ -1.49
SPTBN1-206ENST00000602898 ATP6V1E2Q96A05 226 aa5.75□□□□□ -1.49
SPTBN1-206ENST00000602898 RNF166Q96A37 237 aaPredicted RBP5.75□□□□□ -1.49
SPTBN1-206ENST00000602898 TACO1Q9BSH4 297 aaKnown RBP5.75□□□□□ -1.49
SPTBN1-206ENST00000602898 CSRNP2Q9H175 543 aa5.75□□□□□ -1.49
SPTBN1-206ENST00000602898 UNC93B1Q9H1C4 597 aa5.75□□□□□ -1.49
SPTBN1-206ENST00000602898 VPS45Q9NRW7 570 aa5.75□□□□□ -1.49
SPTBN1-206ENST00000602898 TOMM22Q9NS69 142 aa5.75□□□□□ -1.49
SPTBN1-206ENST00000602898 ATG3Q9NT62 314 aa5.75□□□□□ -1.49
SPTBN1-206ENST00000602898 TMX2Q9Y320 296 aa5.75□□□□□ -1.49
SPTBN1-206ENST00000602898 A0A1B0GUL7 405 aa5.75□□□□□ -1.49
SPTBN1-206ENST00000602898 GPR182O15218 404 aa5.75□□□□□ -1.49
SPTBN1-206ENST00000602898 TPPPO94811 219 aa5.75□□□□□ -1.49
SPTBN1-206ENST00000602898 MYCLP1P12525 358 aaPredicted RBP5.75□□□□□ -1.49
SPTBN1-206ENST00000602898 CYP2C19P33261 490 aa5.75□□□□□ -1.49
SPTBN1-206ENST00000602898 GJA5P36382 358 aa5.75□□□□□ -1.49
SPTBN1-206ENST00000602898 HNRNPH2P55795 449 aaKnown RBP5.75□□□□□ -1.49
SPTBN1-206ENST00000602898 UBASH3AP57075 661 aa5.75□□□□□ -1.49
SPTBN1-206ENST00000602898 NFKB2Q00653 900 aa5.75□□□□□ -1.49
SPTBN1-206ENST00000602898 SKOR2Q2VWA4 1001 aaPredicted RBP5.75□□□□□ -1.49
SPTBN1-206ENST00000602898 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.75□□□□□ -1.49
SPTBN1-206ENST00000602898 COBLL1Q53SF7 1204 aa5.75□□□□□ -1.49
SPTBN1-206ENST00000602898 MEI1Q5TIA1 1274 aa5.75□□□□□ -1.49
SPTBN1-206ENST00000602898 ZNF654Q8IZM8 581 aa5.75□□□□□ -1.49
SPTBN1-206ENST00000602898 LSM14AQ8ND56 463 aaKnown RBP5.75□□□□□ -1.49
SPTBN1-206ENST00000602898 WDR66Q8TBY9 1149 aa5.75□□□□□ -1.49
SPTBN1-206ENST00000602898 BAP1Q92560 729 aa5.75□□□□□ -1.49
SPTBN1-206ENST00000602898 HOOK2Q96ED9 719 aa5.75□□□□□ -1.49
SPTBN1-206ENST00000602898 ZNF396Q96N95 335 aaPredicted RBP5.75□□□□□ -1.49
SPTBN1-206ENST00000602898 FBXO10Q9UK96 956 aa5.75□□□□□ -1.49
SPTBN1-206ENST00000602898 KIAA1107Q9UPP5 1409 aa5.75□□□□□ -1.49
SPTBN1-206ENST00000602898 KTN1Q86UP2 1357 aaKnown RBP5.75□□□□□ -1.49
SPTBN1-206ENST00000602898 CLTCQ00610 1675 aaKnown RBP5.75□□□□□ -1.49
SPTBN1-206ENST00000602898 COL16A1Q07092 1604 aaPredicted RBP5.75□□□□□ -1.49
SPTBN1-206ENST00000602898 MROH1Q8NDA8 1641 aa5.75□□□□□ -1.49
SPTBN1-206ENST00000602898 TRIM64A6NGJ6 449 aa5.75□□□□□ -1.49
SPTBN1-206ENST00000602898 TRIM64BA6NI03 449 aa5.75□□□□□ -1.49
SPTBN1-206ENST00000602898 RTCAO00442 366 aaKnown RBP5.75□□□□□ -1.49
SPTBN1-206ENST00000602898 CHL1O00533 1208 aa5.75□□□□□ -1.49
SPTBN1-206ENST00000602898 RASA4O43374 803 aa5.75□□□□□ -1.49
SPTBN1-206ENST00000602898 CCNYL3P0C7X3 344 aa5.75□□□□□ -1.49
SPTBN1-206ENST00000602898 JUNDP17535 347 aa5.75□□□□□ -1.49
SPTBN1-206ENST00000602898 MAPK9P45984 424 aa5.75□□□□□ -1.49
SPTBN1-206ENST00000602898 RAB33AQ14088 237 aa5.75□□□□□ -1.49
SPTBN1-206ENST00000602898 INF2Q27J81 1249 aa5.75□□□□□ -1.49
SPTBN1-206ENST00000602898 TUSC1Q2TAM9 212 aa5.75□□□□□ -1.49
SPTBN1-206ENST00000602898 C8orf34Q49A92 452 aa5.75□□□□□ -1.49
SPTBN1-206ENST00000602898 ATP13A4Q4VNC1 1196 aa5.75□□□□□ -1.49
SPTBN1-206ENST00000602898 IFFO2Q5TF58 517 aa5.75□□□□□ -1.49
SPTBN1-206ENST00000602898 VPS37DQ86XT2 251 aa5.75□□□□□ -1.49
SPTBN1-206ENST00000602898 ZMAT2Q96NC0 199 aaKnown RBP5.75□□□□□ -1.49
SPTBN1-206ENST00000602898 PLCB1Q9NQ66 1216 aa5.75□□□□□ -1.49
SPTBN1-206ENST00000602898 ETAA1Q9NY74 926 aa5.75□□□□□ -1.49
SPTBN1-206ENST00000602898 SCHIP1Q9P0W5 487 aaPredicted RBP5.75□□□□□ -1.49
SPTBN1-206ENST00000602898 V9GY48 417 aaPredicted RBP5.75□□□□□ -1.49
SPTBN1-206ENST00000602898 V9GYY5 206 aaPredicted RBP5.75□□□□□ -1.49
SPTBN1-206ENST00000602898 NKTRP30414 1462 aaKnown RBP5.74□□□□□ -1.49
SPTBN1-206ENST00000602898 CCDC144AA2RUR9 1427 aa5.74□□□□□ -1.49
SPTBN1-206ENST00000602898 RASA4BC9J798 803 aa5.74□□□□□ -1.49
SPTBN1-206ENST00000602898 CCP110O43303 1012 aa5.74□□□□□ -1.49
SPTBN1-206ENST00000602898 KCNQ2O43526 872 aa5.74□□□□□ -1.49
SPTBN1-206ENST00000602898 ASMTLO95671 621 aa5.74□□□□□ -1.49
SPTBN1-206ENST00000602898 SETSIPP0DME0 302 aa5.74□□□□□ -1.49
SPTBN1-206ENST00000602898 KRT20P35900 424 aa5.74□□□□□ -1.49
SPTBN1-206ENST00000602898 MAP2K2P36507 400 aa5.74□□□□□ -1.49
SPTBN1-206ENST00000602898 MAGEA8P43361 318 aa5.74□□□□□ -1.49
SPTBN1-206ENST00000602898 NEK2P51955 445 aa5.74□□□□□ -1.49
SPTBN1-206ENST00000602898 BIRC3Q13489 604 aa5.74□□□□□ -1.49
SPTBN1-206ENST00000602898 FAM133BQ5BKY9 247 aaKnown RBP5.74□□□□□ -1.49
SPTBN1-206ENST00000602898 ZC3H12BQ5HYM0 836 aaKnown RBP5.74□□□□□ -1.49
SPTBN1-206ENST00000602898 BTN2A1Q7KYR7 527 aa5.74□□□□□ -1.49
SPTBN1-206ENST00000602898 KRT222Q8N1A0 295 aa5.74□□□□□ -1.49
SPTBN1-206ENST00000602898 GABPB2Q8TAK5 448 aaPredicted RBP5.74□□□□□ -1.49
SPTBN1-206ENST00000602898 SLC6A16Q9GZN6 736 aa5.74□□□□□ -1.49
SPTBN1-206ENST00000602898 CDH19Q9H159 772 aa5.74□□□□□ -1.49
SPTBN1-206ENST00000602898 CCDC39Q9UFE4 941 aa5.74□□□□□ -1.49
SPTBN1-206ENST00000602898 XPO7Q9UIA9 1087 aaKnown RBP5.74□□□□□ -1.49
SPTBN1-206ENST00000602898 FKBPLQ9UIM3 349 aa5.74□□□□□ -1.49
SPTBN1-206ENST00000602898 RNF223E7ERA6 249 aa5.74□□□□□ -1.49
SPTBN1-206ENST00000602898 VAMP4O75379 141 aa5.74□□□□□ -1.49
SPTBN1-206ENST00000602898 CSPG5O95196 566 aa5.74□□□□□ -1.49
SPTBN1-206ENST00000602898 MBD4O95243 580 aa5.74□□□□□ -1.49
SPTBN1-206ENST00000602898 MORC3Q14149 939 aa5.74□□□□□ -1.49
SPTBN1-206ENST00000602898 C1orf122Q6ZSJ8 110 aa5.74□□□□□ -1.49
SPTBN1-206ENST00000602898 GAS2L3Q86XJ1 694 aa5.74□□□□□ -1.49
SPTBN1-206ENST00000602898 THNSL2Q86YJ6 484 aa5.74□□□□□ -1.49
SPTBN1-206ENST00000602898 ANKRD20A12PQ8NF67 263 aa5.74□□□□□ -1.49
SPTBN1-206ENST00000602898 USP33Q8TEY7 942 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms