RNA–Protein interactions for RNA: ENST00000600286.1

USHBP1-210, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-210ENST00000600286 DHX32Q7L7V1 743 aaKnown RBP19.61■□□□□ 0.73
USHBP1-210ENST00000600286 PROCA1Q8NCQ7 364 aaPredicted RBP19.61■□□□□ 0.73
USHBP1-210ENST00000600286 ACER1Q8TDN7 264 aa19.61■□□□□ 0.73
USHBP1-210ENST00000600286 TMEM87BQ96K49 555 aa19.61■□□□□ 0.73
USHBP1-210ENST00000600286 ZKSCAN3Q9BRR0 538 aa19.61■□□□□ 0.73
USHBP1-210ENST00000600286 BACH2Q9BYV9 841 aa19.61■□□□□ 0.73
USHBP1-210ENST00000600286 C22orf23Q9BZE7 217 aa19.61■□□□□ 0.73
USHBP1-210ENST00000600286 KAT14Q9H8E8 782 aa19.61■□□□□ 0.73
USHBP1-210ENST00000600286 IL17RBQ9NRM6 502 aa19.61■□□□□ 0.73
USHBP1-210ENST00000600286 ALDH1A1P00352 501 aa19.6■□□□□ 0.73
USHBP1-210ENST00000600286 WTAPQ15007 396 aa19.6■□□□□ 0.73
USHBP1-210ENST00000600286 TMEM67Q5HYA8 995 aa19.6■□□□□ 0.73
USHBP1-210ENST00000600286 MB21D2Q8IYB1 491 aaPredicted RBP19.6■□□□□ 0.73
USHBP1-210ENST00000600286 LPAR1Q92633 364 aa19.6■□□□□ 0.73
USHBP1-210ENST00000600286 TM6SF1Q9BZW5 370 aa19.6■□□□□ 0.73
USHBP1-210ENST00000600286 TAF6LQ9Y6J9 622 aa19.6■□□□□ 0.73
USHBP1-210ENST00000600286 DOCK1Q14185 1865 aa19.6■□□□□ 0.73
USHBP1-210ENST00000600286 TNKSO95271 1327 aa19.59■□□□□ 0.73
USHBP1-210ENST00000600286 TESPA1A2RU30 521 aaPredicted RBP19.59■□□□□ 0.73
USHBP1-210ENST00000600286 NMT2O60551 498 aa19.59■□□□□ 0.73
USHBP1-210ENST00000600286 CASTP20810 708 aaKnown RBP19.59■□□□□ 0.73
USHBP1-210ENST00000600286 TM4SF4P48230 202 aa19.59■□□□□ 0.73
USHBP1-210ENST00000600286 CYB5R4Q7L1T6 521 aa19.59■□□□□ 0.73
USHBP1-210ENST00000600286 CLEC10AQ8IUN9 316 aa19.59■□□□□ 0.73
USHBP1-210ENST00000600286 ABHD8Q96I13 439 aa19.59■□□□□ 0.73
USHBP1-210ENST00000600286 MS4A4AQ96JQ5 239 aa19.59■□□□□ 0.73
USHBP1-210ENST00000600286 VCPKMTQ9H867 229 aa19.59■□□□□ 0.73
USHBP1-210ENST00000600286 SAGE1Q9NXZ1 904 aa19.59■□□□□ 0.73
USHBP1-210ENST00000600286 CYP46A1Q9Y6A2 500 aa19.59■□□□□ 0.73
USHBP1-210ENST00000600286 WDR19Q8NEZ3 1342 aa19.58■□□□□ 0.73
USHBP1-210ENST00000600286 A0A1W2PRG0 241 aa19.58■□□□□ 0.72
USHBP1-210ENST00000600286 OSBPP22059 807 aa19.58■□□□□ 0.72
USHBP1-210ENST00000600286 ADCK5Q3MIX3 580 aa19.58■□□□□ 0.72
USHBP1-210ENST00000600286 SYNE3Q6ZMZ3 975 aa19.58■□□□□ 0.72
USHBP1-210ENST00000600286 NFXL1Q6ZNB6 911 aa19.58■□□□□ 0.72
USHBP1-210ENST00000600286 CHST3Q7LGC8 479 aa19.58■□□□□ 0.72
USHBP1-210ENST00000600286 ANKRD23Q86SG2 305 aa19.58■□□□□ 0.72
USHBP1-210ENST00000600286 SIAH1Q8IUQ4 282 aa19.58■□□□□ 0.72
USHBP1-210ENST00000600286 ANKS1AQ92625 1134 aa19.58■□□□□ 0.72
USHBP1-210ENST00000600286 C12orf42Q96LP6 360 aa19.58■□□□□ 0.72
USHBP1-210ENST00000600286 PNMA3Q9UL41 463 aa19.58■□□□□ 0.72
USHBP1-210ENST00000600286 ISY1Q9ULR0 285 aaKnown RBP19.58■□□□□ 0.72
USHBP1-210ENST00000600286 MYH8P13535 1937 aa19.58■□□□□ 0.72
USHBP1-210ENST00000600286 LAMA4Q16363 1823 aa19.58■□□□□ 0.72
USHBP1-210ENST00000600286 CCDC69A6NI79 296 aa19.57■□□□□ 0.72
USHBP1-210ENST00000600286 F5H6K3 240 aa19.57■□□□□ 0.72
USHBP1-210ENST00000600286 KLRC3Q07444 240 aa19.57■□□□□ 0.72
USHBP1-210ENST00000600286 SLFN13Q68D06 897 aa19.57■□□□□ 0.72
USHBP1-210ENST00000600286 ENAHQ8N8S7 591 aaPredicted RBP19.57■□□□□ 0.72
USHBP1-210ENST00000600286 GMCL1P1Q8NEA9 526 aa19.57■□□□□ 0.72
USHBP1-210ENST00000600286 BRI3BPQ8WY22 251 aa19.57■□□□□ 0.72
USHBP1-210ENST00000600286 TMEM47Q9BQJ4 181 aa19.57■□□□□ 0.72
USHBP1-210ENST00000600286 ZCCHC17Q9NP64 241 aaKnown RBP19.57■□□□□ 0.72
USHBP1-210ENST00000600286 EMILIN3Q9NT22 766 aa19.57■□□□□ 0.72
USHBP1-210ENST00000600286 AGTPBP1Q9UPW5 1226 aa19.57■□□□□ 0.72
USHBP1-210ENST00000600286 OTOFQ9HC10 1997 aa19.57■□□□□ 0.72
USHBP1-210ENST00000600286 USP17L15C9J2P7 530 aa19.56■□□□□ 0.72
USHBP1-210ENST00000600286 USP17L13C9JLJ4 530 aa19.56■□□□□ 0.72
USHBP1-210ENST00000600286 USP17L11C9JVI0 530 aa19.56■□□□□ 0.72
USHBP1-210ENST00000600286 USP17L18D6R9N7 530 aa19.56■□□□□ 0.72
USHBP1-210ENST00000600286 USP17L22D6RA61 530 aa19.56■□□□□ 0.72
USHBP1-210ENST00000600286 USP17L17D6RBQ6 530 aa19.56■□□□□ 0.72
USHBP1-210ENST00000600286 USP17L19D6RCP7 530 aa19.56■□□□□ 0.72
USHBP1-210ENST00000600286 USP17L20D6RJB6 530 aa19.56■□□□□ 0.72
USHBP1-210ENST00000600286 NOVP48745 357 aa19.56■□□□□ 0.72
USHBP1-210ENST00000600286 USP17L24Q0WX57 530 aa19.56■□□□□ 0.72
USHBP1-210ENST00000600286 RUFY3Q7L099 469 aa19.56■□□□□ 0.72
USHBP1-210ENST00000600286 CATIPQ7Z7H3 387 aa19.56■□□□□ 0.72
USHBP1-210ENST00000600286 IFNL1Q8IU54 200 aa19.56■□□□□ 0.72
USHBP1-210ENST00000600286 LRRC47Q8N1G4 583 aaKnown RBP19.56■□□□□ 0.72
USHBP1-210ENST00000600286 RNF186Q9NXI6 227 aa19.56■□□□□ 0.72
USHBP1-210ENST00000600286 SLC45A1Q9Y2W3 748 aa19.56■□□□□ 0.72
USHBP1-210ENST00000600286 BTBD19C9JJ37 291 aa19.55■□□□□ 0.72
USHBP1-210ENST00000600286 WDR46O15213 610 aaKnown RBP19.55■□□□□ 0.72
USHBP1-210ENST00000600286 RPS6KB1P23443 525 aa19.55■□□□□ 0.72
USHBP1-210ENST00000600286 SLC1A4P43007 532 aa19.55■□□□□ 0.72
USHBP1-210ENST00000600286 IRX3P78415 501 aaPredicted RBP19.55■□□□□ 0.72
USHBP1-210ENST00000600286 SPICE1Q8N0Z3 855 aa19.55■□□□□ 0.72
USHBP1-210ENST00000600286 PNMA1Q8ND90 353 aa19.55■□□□□ 0.72
USHBP1-210ENST00000600286 ZSWIM6Q9HCJ5 1215 aa19.55■□□□□ 0.72
USHBP1-210ENST00000600286 MTMR7Q9Y216 660 aa19.55■□□□□ 0.72
USHBP1-210ENST00000600286 PDHXO00330 501 aa19.54■□□□□ 0.72
USHBP1-210ENST00000600286 VCAM1P19320 739 aa19.54■□□□□ 0.72
USHBP1-210ENST00000600286 LIFRP42702 1097 aa19.54■□□□□ 0.72
USHBP1-210ENST00000600286 ANTXR2P58335 489 aa19.54■□□□□ 0.72
USHBP1-210ENST00000600286 EXOSC10Q01780 885 aaKnown RBP19.54■□□□□ 0.72
USHBP1-210ENST00000600286 RCSD1Q6JBY9 416 aa19.54■□□□□ 0.72
USHBP1-210ENST00000600286 IL27Q8NEV9 243 aa19.54■□□□□ 0.72
USHBP1-210ENST00000600286 IGDCC4Q8TDY8 1250 aa19.54■□□□□ 0.72
USHBP1-210ENST00000600286 DCAF4Q8WV16 495 aa19.54■□□□□ 0.72
USHBP1-210ENST00000600286 TANGO6Q9C0B7 1094 aa19.54■□□□□ 0.72
USHBP1-210ENST00000600286 RPAP3Q9H6T3 665 aaPredicted RBP19.54■□□□□ 0.72
USHBP1-210ENST00000600286 ZFYVE28Q9HCC9 887 aa19.54■□□□□ 0.72
USHBP1-210ENST00000600286 ATAD5Q96QE3 1844 aa19.53■□□□□ 0.72
USHBP1-210ENST00000600286 NDUFB10O96000 172 aa19.53■□□□□ 0.72
USHBP1-210ENST00000600286 BMP3P12645 472 aa19.53■□□□□ 0.72
USHBP1-210ENST00000600286 HOXA7P31268 230 aaPredicted RBP19.53■□□□□ 0.72
USHBP1-210ENST00000600286 RBM25P49756 843 aaKnown RBP19.53■□□□□ 0.72
USHBP1-210ENST00000600286 IKQ13123 557 aaPredicted RBP19.53■□□□□ 0.72
USHBP1-210ENST00000600286 SEC23AQ15436 765 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms