RNA–Protein interactions for RNA: ENST00000599687.1

SNRNP70-208, Transcript of small nuclear ribonucleoprotein U1 subunit 70, human

TSL 2

Gene SNRNP70, Length 563 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNRNP70-208	ENST00000599687	GYG1	P46976	350 aa		10.84	□□□□□ -0.67
SNRNP70-208	ENST00000599687	FKBP1A	P62942	108 aa	Known RBP	10.84	□□□□□ -0.67
SNRNP70-208	ENST00000599687	PTPN12	Q05209	780 aa	Known RBP	10.84	□□□□□ -0.67
SNRNP70-208	ENST00000599687	USP4	Q13107	963 aa		10.84	□□□□□ -0.67
SNRNP70-208	ENST00000599687	METTL24	Q5JXM2	366 aa		10.84	□□□□□ -0.67
SNRNP70-208	ENST00000599687	TMC7	Q7Z402	723 aa		10.84	□□□□□ -0.67
SNRNP70-208	ENST00000599687	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	10.84	□□□□□ -0.67
SNRNP70-208	ENST00000599687	UBXN4	Q92575	508 aa		10.84	□□□□□ -0.67
SNRNP70-208	ENST00000599687	FRAT1	Q92837	279 aa	Predicted RBP	10.84	□□□□□ -0.67
SNRNP70-208	ENST00000599687	CAPNS2	Q96L46	248 aa		10.84	□□□□□ -0.67
SNRNP70-208	ENST00000599687	MEIS3	Q99687	375 aa		10.84	□□□□□ -0.67
SNRNP70-208	ENST00000599687	HDAC9	Q9UKV0	1011 aa		10.84	□□□□□ -0.67
SNRNP70-208	ENST00000599687	HDAC5	Q9UQL6	1122 aa		10.84	□□□□□ -0.67
SNRNP70-208	ENST00000599687	TNN	Q9UQP3	1299 aa		10.84	□□□□□ -0.67
SNRNP70-208	ENST00000599687	FAM205A	Q6ZU69	1335 aa		10.84	□□□□□ -0.67
SNRNP70-208	ENST00000599687	EYA2	O00167	538 aa		10.83	□□□□□ -0.68
SNRNP70-208	ENST00000599687	SMARCA5	O60264	1052 aa	Predicted RBP	10.83	□□□□□ -0.68
SNRNP70-208	ENST00000599687	C4orf48	Q5BLP8	95 aa		10.83	□□□□□ -0.68
SNRNP70-208	ENST00000599687	LDLRAD1	Q5T700	205 aa		10.83	□□□□□ -0.68
SNRNP70-208	ENST00000599687	ATF7IP	Q6VMQ6	1270 aa		10.83	□□□□□ -0.68
SNRNP70-208	ENST00000599687	ATG9A	Q7Z3C6	839 aa		10.83	□□□□□ -0.68
SNRNP70-208	ENST00000599687	FOXJ1	Q92949	421 aa		10.83	□□□□□ -0.68
SNRNP70-208	ENST00000599687	CDCA5	Q96FF9	252 aa		10.83	□□□□□ -0.68
SNRNP70-208	ENST00000599687	ZBED3	Q96IU2	234 aa	Predicted RBP	10.83	□□□□□ -0.68
SNRNP70-208	ENST00000599687	GBA2	Q9HCG7	927 aa	Predicted RBP	10.83	□□□□□ -0.68
SNRNP70-208	ENST00000599687	SCAF8	Q9UPN6	1271 aa	Known RBP	10.83	□□□□□ -0.68
SNRNP70-208	ENST00000599687	JAG2	Q9Y219	1238 aa		10.83	□□□□□ -0.68
SNRNP70-208	ENST00000599687	LRRFIP2	Q9Y608	721 aa	Known RBP	10.83	□□□□□ -0.68
SNRNP70-208	ENST00000599687		M0R2N6	131 aa		10.82	□□□□□ -0.68
SNRNP70-208	ENST00000599687	FOXN1	O15353	648 aa		10.82	□□□□□ -0.68
SNRNP70-208	ENST00000599687	GNAI3	P08754	354 aa		10.82	□□□□□ -0.68
SNRNP70-208	ENST00000599687	FGFR2	P21802	821 aa		10.82	□□□□□ -0.68
SNRNP70-208	ENST00000599687	HUNK	P57058	714 aa		10.82	□□□□□ -0.68
SNRNP70-208	ENST00000599687	GRM1	Q13255	1194 aa		10.82	□□□□□ -0.68
SNRNP70-208	ENST00000599687	SF3A1	Q15459	793 aa	Known RBP	10.82	□□□□□ -0.68
SNRNP70-208	ENST00000599687	COL13A1	Q5TAT6	717 aa	Predicted RBP	10.82	□□□□□ -0.68
SNRNP70-208	ENST00000599687	C2orf69	Q8N8R5	385 aa		10.82	□□□□□ -0.68
SNRNP70-208	ENST00000599687	BCL11A	Q9H165	835 aa		10.82	□□□□□ -0.68
SNRNP70-208	ENST00000599687	THSD7B	Q9C0I4	1608 aa		10.82	□□□□□ -0.68
SNRNP70-208	ENST00000599687	ZBED9	Q6R2W3	1325 aa		10.82	□□□□□ -0.68
SNRNP70-208	ENST00000599687	ESPN	B1AK53	854 aa		10.81	□□□□□ -0.68
SNRNP70-208	ENST00000599687		F8W031	263 aa	Predicted RBP	10.81	□□□□□ -0.68
SNRNP70-208	ENST00000599687	AOC2	O75106	756 aa		10.81	□□□□□ -0.68
SNRNP70-208	ENST00000599687	CIAO1	O76071	339 aa		10.81	□□□□□ -0.68
SNRNP70-208	ENST00000599687	MAP2K2	P36507	400 aa		10.81	□□□□□ -0.68
SNRNP70-208	ENST00000599687	MAP2K1	Q02750	393 aa	Predicted RBP	10.81	□□□□□ -0.68
SNRNP70-208	ENST00000599687	DLGAP5	Q15398	846 aa		10.81	□□□□□ -0.68
SNRNP70-208	ENST00000599687	CAVIN4	Q5BKX8	364 aa		10.81	□□□□□ -0.68
SNRNP70-208	ENST00000599687	ZKSCAN2	Q63HK3	967 aa		10.81	□□□□□ -0.68
SNRNP70-208	ENST00000599687	SLC10A4	Q96EP9	437 aa		10.81	□□□□□ -0.68
SNRNP70-208	ENST00000599687	RBCK1	Q9BYM8	510 aa		10.81	□□□□□ -0.68
SNRNP70-208	ENST00000599687	PCDHAC2	Q9Y5I4	1007 aa		10.81	□□□□□ -0.68
SNRNP70-208	ENST00000599687	SCAMP3	O14828	347 aa	Known RBP	10.8	□□□□□ -0.68
SNRNP70-208	ENST00000599687	IFIT1	P09914	478 aa	Known RBP	10.8	□□□□□ -0.68
SNRNP70-208	ENST00000599687	NPR3	P17342	541 aa		10.8	□□□□□ -0.68
SNRNP70-208	ENST00000599687	MTX1	Q13505	466 aa		10.8	□□□□□ -0.68
SNRNP70-208	ENST00000599687	AGER	Q15109	404 aa		10.8	□□□□□ -0.68
SNRNP70-208	ENST00000599687	PUM3	Q15397	648 aa	Known RBP	10.8	□□□□□ -0.68
SNRNP70-208	ENST00000599687	NBPF20	Q3BBV1	942 aa		10.8	□□□□□ -0.68
SNRNP70-208	ENST00000599687	CFAP100	Q494V2	611 aa		10.8	□□□□□ -0.68
SNRNP70-208	ENST00000599687	LINC01559	Q495D7	138 aa		10.8	□□□□□ -0.68
SNRNP70-208	ENST00000599687	MFSD14B	Q5SR56	506 aa		10.8	□□□□□ -0.68
SNRNP70-208	ENST00000599687	PRAMEF18	Q5VWM3	479 aa		10.8	□□□□□ -0.68
SNRNP70-208	ENST00000599687	RGMB	Q6NW40	437 aa		10.8	□□□□□ -0.68
SNRNP70-208	ENST00000599687	VPS37D	Q86XT2	251 aa		10.8	□□□□□ -0.68
SNRNP70-208	ENST00000599687	BAP1	Q92560	729 aa		10.8	□□□□□ -0.68
SNRNP70-208	ENST00000599687	COL26A1	Q96A83	441 aa		10.8	□□□□□ -0.68
SNRNP70-208	ENST00000599687	PRMT6	Q96LA8	375 aa	Predicted RBP	10.8	□□□□□ -0.68
SNRNP70-208	ENST00000599687	SIL1	Q9H173	461 aa		10.8	□□□□□ -0.68
SNRNP70-208	ENST00000599687	COPRS	Q9NQ92	184 aa		10.8	□□□□□ -0.68
SNRNP70-208	ENST00000599687	ZNF358	Q9NW07	568 aa		10.8	□□□□□ -0.68
SNRNP70-208	ENST00000599687	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	10.8	□□□□□ -0.68
SNRNP70-208	ENST00000599687	PA2G4	Q9UQ80	394 aa	Known RBP	10.8	□□□□□ -0.68
SNRNP70-208	ENST00000599687	FAM13A	O94988	1023 aa		10.79	□□□□□ -0.68
SNRNP70-208	ENST00000599687	MPST	P25325	297 aa		10.79	□□□□□ -0.68
SNRNP70-208	ENST00000599687	CTCF	P49711	727 aa	Predicted RBP	10.79	□□□□□ -0.68
SNRNP70-208	ENST00000599687	FKBP1B	P68106	108 aa		10.79	□□□□□ -0.68
SNRNP70-208	ENST00000599687	GRIK5	Q16478	980 aa		10.79	□□□□□ -0.68
SNRNP70-208	ENST00000599687	APOBEC3F	Q8IUX4	373 aa	Known RBP	10.79	□□□□□ -0.68
SNRNP70-208	ENST00000599687	TMEM57	Q8N5G2	664 aa		10.79	□□□□□ -0.68
SNRNP70-208	ENST00000599687	LPIN2	Q92539	896 aa		10.79	□□□□□ -0.68
SNRNP70-208	ENST00000599687	AIDA	Q96BJ3	306 aa		10.79	□□□□□ -0.68
SNRNP70-208	ENST00000599687	SPATA32	Q96LK8	384 aa		10.79	□□□□□ -0.68
SNRNP70-208	ENST00000599687	FAM161B	Q96MY7	647 aa		10.79	□□□□□ -0.68
SNRNP70-208	ENST00000599687	ECM29	Q5VYK3	1845 aa		10.79	□□□□□ -0.68
SNRNP70-208	ENST00000599687	FAM155A	B1AL88	458 aa	Predicted RBP	10.78	□□□□□ -0.68
SNRNP70-208	ENST00000599687		H3BM21	787 aa		10.78	□□□□□ -0.68
SNRNP70-208	ENST00000599687	TREH	O43280	583 aa		10.78	□□□□□ -0.68
SNRNP70-208	ENST00000599687	SRGAP3	O43295	1099 aa		10.78	□□□□□ -0.68
SNRNP70-208	ENST00000599687	FRAT2	O75474	233 aa	Predicted RBP	10.78	□□□□□ -0.68
SNRNP70-208	ENST00000599687	ALDH1A1	P00352	501 aa		10.78	□□□□□ -0.68
SNRNP70-208	ENST00000599687	GNAI2	P04899	355 aa		10.78	□□□□□ -0.68
SNRNP70-208	ENST00000599687	SLC5A1	P13866	664 aa		10.78	□□□□□ -0.68
SNRNP70-208	ENST00000599687	LOR	P23490	312 aa	Predicted RBP	10.78	□□□□□ -0.68
SNRNP70-208	ENST00000599687	IL15	P40933	162 aa	Predicted RBP	10.78	□□□□□ -0.68
SNRNP70-208	ENST00000599687	RBM5	P52756	815 aa	Known RBP eCLIP	10.78	□□□□□ -0.68
SNRNP70-208	ENST00000599687	WNT7B	P56706	349 aa		10.78	□□□□□ -0.68
SNRNP70-208	ENST00000599687	CHAF1A	Q13111	956 aa	Predicted RBP	10.78	□□□□□ -0.68
SNRNP70-208	ENST00000599687	NOG	Q13253	232 aa		10.78	□□□□□ -0.68
SNRNP70-208	ENST00000599687	MOB2	Q70IA6	237 aa		10.78	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 255.2 ms