RNA–Protein interactions for RNA: ENST00000599642.1

KHSRP-211, Transcript of KH-type splicing regulatory protein, humanhuman

TSL 2

Gene KHSRP, Length 428 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHSRP-211ENST00000599642 UBE2Q2LH0YL09 131 aa21.71■■□□□ 1.07
KHSRP-211ENST00000599642 SNHG28P0DPA3 235 aa21.71■■□□□ 1.07
KHSRP-211ENST00000599642 GNAQP50148 359 aa21.71■■□□□ 1.07
KHSRP-211ENST00000599642 BACE1P56817 501 aa21.71■■□□□ 1.07
KHSRP-211ENST00000599642 TROAPQ12815 778 aa21.71■■□□□ 1.07
KHSRP-211ENST00000599642 USP17L2Q6R6M4 530 aa21.71■■□□□ 1.07
KHSRP-211ENST00000599642 ZNF654Q8IZM8 581 aa21.71■■□□□ 1.07
KHSRP-211ENST00000599642 DCAF4Q8WV16 495 aa21.71■■□□□ 1.07
KHSRP-211ENST00000599642 GMCL1Q96IK5 515 aa21.71■■□□□ 1.07
KHSRP-211ENST00000599642 VCPKMTQ9H867 229 aa21.71■■□□□ 1.07
KHSRP-211ENST00000599642 RBM28Q9NW13 759 aaKnown RBP21.71■■□□□ 1.07
KHSRP-211ENST00000599642 ZHX2Q9Y6X8 837 aa21.71■■□□□ 1.07
KHSRP-211ENST00000599642 ZBTB43O43298 467 aa21.7■■□□□ 1.06
KHSRP-211ENST00000599642 DHX16O60231 1041 aaKnown RBP21.7■■□□□ 1.06
KHSRP-211ENST00000599642 SMARCA1P28370 1054 aa21.7■■□□□ 1.06
KHSRP-211ENST00000599642 KIF5BP33176 963 aa21.7■■□□□ 1.06
KHSRP-211ENST00000599642 APLP1P51693 650 aa21.7■■□□□ 1.06
KHSRP-211ENST00000599642 HUNKP57058 714 aa21.7■■□□□ 1.06
KHSRP-211ENST00000599642 COL9A3Q14050 684 aaPredicted RBP21.7■■□□□ 1.06
KHSRP-211ENST00000599642 GPATCH4Q5T3I0 446 aaKnown RBP21.7■■□□□ 1.06
KHSRP-211ENST00000599642 CCDC102AQ96A19 550 aa21.7■■□□□ 1.06
KHSRP-211ENST00000599642 TCEANC2Q96MN5 208 aa21.7■■□□□ 1.06
KHSRP-211ENST00000599642 LRRC2Q9BYS8 371 aa21.7■■□□□ 1.06
KHSRP-211ENST00000599642 CREBZFQ9NS37 354 aa21.7■■□□□ 1.06
KHSRP-211ENST00000599642 KLF18A0A0U1RQI7 1052 aa21.69■■□□□ 1.06
KHSRP-211ENST00000599642 PLA2G6O60733 806 aa21.69■■□□□ 1.06
KHSRP-211ENST00000599642 FMR1Q06787 632 aaKnown RBP eCLIP21.69■■□□□ 1.06
KHSRP-211ENST00000599642 BECN1Q14457 450 aa21.69■■□□□ 1.06
KHSRP-211ENST00000599642 ASPRV1Q53RT3 343 aa21.69■■□□□ 1.06
KHSRP-211ENST00000599642 PROCA1Q8NCQ7 364 aaPredicted RBP21.69■■□□□ 1.06
KHSRP-211ENST00000599642 LZTS2Q9BRK4 669 aa21.69■■□□□ 1.06
KHSRP-211ENST00000599642 ELP3Q9H9T3 547 aa21.69■■□□□ 1.06
KHSRP-211ENST00000599642 FZD1Q9UP38 647 aa21.69■■□□□ 1.06
KHSRP-211ENST00000599642 F5H6K3 240 aa21.68■■□□□ 1.06
KHSRP-211ENST00000599642 PFKFB2O60825 505 aa21.68■■□□□ 1.06
KHSRP-211ENST00000599642 PDIA3P30101 505 aaKnown RBP21.68■■□□□ 1.06
KHSRP-211ENST00000599642 ANP32AP39687 249 aaKnown RBP21.68■■□□□ 1.06
KHSRP-211ENST00000599642 KLRC3Q07444 240 aa21.68■■□□□ 1.06
KHSRP-211ENST00000599642 RGMBQ6NW40 437 aa21.68■■□□□ 1.06
KHSRP-211ENST00000599642 MOB2Q70IA6 237 aa21.68■■□□□ 1.06
KHSRP-211ENST00000599642 FASTKD5Q7L8L6 764 aaKnown RBP21.68■■□□□ 1.06
KHSRP-211ENST00000599642 HSCBQ8IWL3 235 aa21.68■■□□□ 1.06
KHSRP-211ENST00000599642 CTCFLQ8NI51 663 aaPredicted RBP21.68■■□□□ 1.06
KHSRP-211ENST00000599642 OPTNQ96CV9 577 aa21.68■■□□□ 1.06
KHSRP-211ENST00000599642 FEZ1Q99689 392 aa21.68■■□□□ 1.06
KHSRP-211ENST00000599642 A0A1W2PRG0 241 aa21.67■■□□□ 1.06
KHSRP-211ENST00000599642 WDR46O15213 610 aaKnown RBP21.67■■□□□ 1.06
KHSRP-211ENST00000599642 PDHBP11177 359 aa21.67■■□□□ 1.06
KHSRP-211ENST00000599642 GTF2A2P52657 109 aa21.67■■□□□ 1.06
KHSRP-211ENST00000599642 APOBRQ0VD83 1088 aa21.67■■□□□ 1.06
KHSRP-211ENST00000599642 SPP2Q13103 211 aa21.67■■□□□ 1.06
KHSRP-211ENST00000599642 GRM4Q14833 912 aa21.67■■□□□ 1.06
KHSRP-211ENST00000599642 SHROOM1Q2M3G4 852 aaPredicted RBP21.67■■□□□ 1.06
KHSRP-211ENST00000599642 FANCBQ8NB91 859 aa21.67■■□□□ 1.06
KHSRP-211ENST00000599642 WNK4Q96J92 1243 aa21.67■■□□□ 1.06
KHSRP-211ENST00000599642 CLMNQ96JQ2 1002 aa21.67■■□□□ 1.06
KHSRP-211ENST00000599642 TSHZ2Q9NRE2 1034 aa21.67■■□□□ 1.06
KHSRP-211ENST00000599642 TPCN1Q9ULQ1 816 aa21.67■■□□□ 1.06
KHSRP-211ENST00000599642 A0A0G2JLL6 359 aaPredicted RBP21.66■■□□□ 1.06
KHSRP-211ENST00000599642 K7ELQ4 463 aaPredicted RBP21.66■■□□□ 1.06
KHSRP-211ENST00000599642 METAP2P50579 478 aaKnown RBP eCLIP21.66■■□□□ 1.061e-8■□□□□ 9.2
KHSRP-211ENST00000599642 INHBEP58166 350 aa21.66■■□□□ 1.06
KHSRP-211ENST00000599642 ATP2B2Q01814 1243 aa21.66■■□□□ 1.06
KHSRP-211ENST00000599642 SNAPC2Q13487 334 aa21.66■■□□□ 1.06
KHSRP-211ENST00000599642 SLFN13Q68D06 897 aa21.66■■□□□ 1.06
KHSRP-211ENST00000599642 CPLX2Q6PUV4 134 aaKnown RBP21.66■■□□□ 1.06
KHSRP-211ENST00000599642 PRRT2Q7Z6L0 340 aaPredicted RBP21.66■■□□□ 1.06
KHSRP-211ENST00000599642 REM2Q8IYK8 340 aaPredicted RBP21.66■■□□□ 1.06
KHSRP-211ENST00000599642 SLKQ9H2G2 1235 aaPredicted RBP21.66■■□□□ 1.06
KHSRP-211ENST00000599642 TMOD4Q9NZQ9 345 aa21.66■■□□□ 1.06
KHSRP-211ENST00000599642 BRPF3Q9ULD4 1205 aa21.66■■□□□ 1.06
KHSRP-211ENST00000599642 PARP14Q460N5 1801 aa21.66■■□□□ 1.06
KHSRP-211ENST00000599642 PALM3A6NDB9 673 aaPredicted RBP21.65■■□□□ 1.06
KHSRP-211ENST00000599642 PARP1P09874 1014 aaKnown RBP21.65■■□□□ 1.06
KHSRP-211ENST00000599642 ECE1P42892 770 aa21.65■■□□□ 1.06
KHSRP-211ENST00000599642 SPRYD7Q5W111 196 aa21.65■■□□□ 1.06
KHSRP-211ENST00000599642 ACER1Q8TDN7 264 aa21.65■■□□□ 1.06
KHSRP-211ENST00000599642 OTUD5Q96G74 571 aa21.65■■□□□ 1.06
KHSRP-211ENST00000599642 GPHNQ9NQX3 736 aaPredicted RBP21.65■■□□□ 1.06
KHSRP-211ENST00000599642 RBM27Q9P2N5 1060 aaKnown RBP21.65■■□□□ 1.06
KHSRP-211ENST00000599642 SLC45A1Q9Y2W3 748 aa21.65■■□□□ 1.06
KHSRP-211ENST00000599642 MYPNQ86TC9 1320 aa21.64■■□□□ 1.05
KHSRP-211ENST00000599642 RASSF10A6NK89 507 aa21.64■■□□□ 1.05
KHSRP-211ENST00000599642 GOLGA8BA8MQT2 603 aa21.64■■□□□ 1.05
KHSRP-211ENST00000599642 IRF6O14896 467 aa21.64■■□□□ 1.05
KHSRP-211ENST00000599642 CDKL5O76039 1030 aa21.64■■□□□ 1.05
KHSRP-211ENST00000599642 NDUFB10O96000 172 aa21.64■■□□□ 1.05
KHSRP-211ENST00000599642 FDX1P10109 184 aa21.64■■□□□ 1.05
KHSRP-211ENST00000599642 CETPP11597 493 aa21.64■■□□□ 1.05
KHSRP-211ENST00000599642 SLC1A4P43007 532 aa21.64■■□□□ 1.05
KHSRP-211ENST00000599642 ZNF543Q08ER8 600 aa21.64■■□□□ 1.05
KHSRP-211ENST00000599642 PABPC4Q13310 644 aaKnown RBP eCLIP21.64■■□□□ 1.052e-10■■■□□ 16
KHSRP-211ENST00000599642 MTMR2Q13614 643 aa21.64■■□□□ 1.05
KHSRP-211ENST00000599642 ME3Q16798 604 aa21.64■■□□□ 1.05
KHSRP-211ENST00000599642 RTN1Q16799 776 aa21.64■■□□□ 1.05
KHSRP-211ENST00000599642 LRRC47Q8N1G4 583 aaKnown RBP21.64■■□□□ 1.05
KHSRP-211ENST00000599642 LLPHQ9BRT6 129 aaKnown RBP21.64■■□□□ 1.05
KHSRP-211ENST00000599642 SENP2Q9HC62 589 aa21.64■■□□□ 1.05
KHSRP-211ENST00000599642 ZCCHC17Q9NP64 241 aaKnown RBP21.64■■□□□ 1.05
KHSRP-211ENST00000599642 MYH6P13533 1939 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms