RNA–Protein interactions for RNA: ENST00000596860.1

SNRPA-202, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 2

Gene SNRPA, Length 336 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-202ENST00000596860 STX8Q9UNK0 236 aa10.25□□□□□ -0.77
SNRPA-202ENST00000596860 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.25□□□□□ -0.77
SNRPA-202ENST00000596860 PASKQ96RG2 1323 aa10.25□□□□□ -0.77
SNRPA-202ENST00000596860 SPDYE5A6NIY4 337 aa10.24□□□□□ -0.77
SNRPA-202ENST00000596860 C19orf81C9J6K1 198 aa10.24□□□□□ -0.77
SNRPA-202ENST00000596860 GDF11O95390 407 aa10.24□□□□□ -0.77
SNRPA-202ENST00000596860 CD2BP2O95400 341 aaKnown RBP10.24□□□□□ -0.77
SNRPA-202ENST00000596860 EEF2P13639 858 aaKnown RBP10.24□□□□□ -0.77
SNRPA-202ENST00000596860 PTPRAP18433 802 aa10.24□□□□□ -0.77
SNRPA-202ENST00000596860 APOBRQ0VD83 1088 aa10.24□□□□□ -0.77
SNRPA-202ENST00000596860 GRM4Q14833 912 aa10.24□□□□□ -0.77
SNRPA-202ENST00000596860 ME3Q16798 604 aa10.24□□□□□ -0.77
SNRPA-202ENST00000596860 ASPRV1Q53RT3 343 aa10.24□□□□□ -0.77
SNRPA-202ENST00000596860 GPATCH4Q5T3I0 446 aaKnown RBP10.24□□□□□ -0.77
SNRPA-202ENST00000596860 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.24□□□□□ -0.77
SNRPA-202ENST00000596860 ERO1BQ86YB8 467 aa10.24□□□□□ -0.77
SNRPA-202ENST00000596860 POTEDQ86YR6 584 aa10.24□□□□□ -0.77
SNRPA-202ENST00000596860 SIAH1Q8IUQ4 282 aa10.24□□□□□ -0.77
SNRPA-202ENST00000596860 C2orf69Q8N8R5 385 aa10.24□□□□□ -0.77
SNRPA-202ENST00000596860 FANCBQ8NB91 859 aa10.24□□□□□ -0.77
SNRPA-202ENST00000596860 C12orf42Q96LP6 360 aa10.24□□□□□ -0.77
SNRPA-202ENST00000596860 IPO9Q96P70 1041 aaKnown RBP10.24□□□□□ -0.77
SNRPA-202ENST00000596860 ZKSCAN3Q9BRR0 538 aa10.24□□□□□ -0.77
SNRPA-202ENST00000596860 LRRC2Q9BYS8 371 aa10.24□□□□□ -0.77
SNRPA-202ENST00000596860 GBA2Q9HCG7 927 aaPredicted RBP10.24□□□□□ -0.77
SNRPA-202ENST00000596860 GOPCQ9HD26 462 aa10.24□□□□□ -0.77
SNRPA-202ENST00000596860 HPS5Q9UPZ3 1129 aa10.24□□□□□ -0.77
SNRPA-202ENST00000596860 MYH6P13533 1939 aa10.24□□□□□ -0.77
SNRPA-202ENST00000596860 PALM3A6NDB9 673 aaPredicted RBP10.23□□□□□ -0.77
SNRPA-202ENST00000596860 GOLGA8BA8MQT2 603 aa10.23□□□□□ -0.77
SNRPA-202ENST00000596860 CXCL11O14625 94 aa10.23□□□□□ -0.77
SNRPA-202ENST00000596860 NMT2O60551 498 aa10.23□□□□□ -0.77
SNRPA-202ENST00000596860 INPP5BP32019 993 aa10.23□□□□□ -0.77
SNRPA-202ENST00000596860 METAP2P50579 478 aaKnown RBP eCLIP10.23□□□□□ -0.772e-7■■□□□ 12.5
SNRPA-202ENST00000596860 HMGN5P82970 282 aaKnown RBP10.23□□□□□ -0.77
SNRPA-202ENST00000596860 PPIL2Q13356 520 aa10.23□□□□□ -0.77
SNRPA-202ENST00000596860 RAB3GAP1Q15042 981 aa10.23□□□□□ -0.77
SNRPA-202ENST00000596860 RTN1Q16799 776 aa10.23□□□□□ -0.77
SNRPA-202ENST00000596860 SH3D19Q5HYK7 790 aa10.23□□□□□ -0.77
SNRPA-202ENST00000596860 PRAMEF18Q5VWM3 479 aa10.23□□□□□ -0.77
SNRPA-202ENST00000596860 ZNF280CQ8ND82 737 aa10.23□□□□□ -0.77
SNRPA-202ENST00000596860 CTCFLQ8NI51 663 aaPredicted RBP10.23□□□□□ -0.77
SNRPA-202ENST00000596860 HHIPL1Q96JK4 782 aa10.23□□□□□ -0.77
SNRPA-202ENST00000596860 VCPKMTQ9H867 229 aa10.23□□□□□ -0.77
SNRPA-202ENST00000596860 CWC22Q9HCG8 908 aaKnown RBP10.23□□□□□ -0.77
SNRPA-202ENST00000596860 CLIP2Q9UDT6 1046 aa10.23□□□□□ -0.77
SNRPA-202ENST00000596860 BRPF3Q9ULD4 1205 aa10.23□□□□□ -0.77
SNRPA-202ENST00000596860 SCAF8Q9UPN6 1271 aaKnown RBP10.23□□□□□ -0.77
SNRPA-202ENST00000596860 KIF3AQ9Y496 699 aa10.23□□□□□ -0.77
SNRPA-202ENST00000596860 SNCAIPQ9Y6H5 919 aa10.23□□□□□ -0.77
SNRPA-202ENST00000596860 STK36Q9NRP7 1315 aa10.23□□□□□ -0.77
SNRPA-202ENST00000596860 LOC285556D6RIA3 1793 aa10.23□□□□□ -0.77
SNRPA-202ENST00000596860 GOLGA8AA7E2F4 631 aa10.22□□□□□ -0.77
SNRPA-202ENST00000596860 USP17L10C9JJH3 530 aa10.22□□□□□ -0.77
SNRPA-202ENST00000596860 WDR46O15213 610 aaKnown RBP10.22□□□□□ -0.77
SNRPA-202ENST00000596860 SLURP2P0DP57 97 aa10.22□□□□□ -0.77
SNRPA-202ENST00000596860 FDX1P10109 184 aa10.22□□□□□ -0.77
SNRPA-202ENST00000596860 PDHBP11177 359 aa10.22□□□□□ -0.77
SNRPA-202ENST00000596860 IFNAR1P17181 557 aa10.22□□□□□ -0.77
SNRPA-202ENST00000596860 BACE1P56817 501 aa10.22□□□□□ -0.77
SNRPA-202ENST00000596860 JAG1P78504 1218 aa10.22□□□□□ -0.77
SNRPA-202ENST00000596860 SCRN1Q12765 414 aa10.22□□□□□ -0.77
SNRPA-202ENST00000596860 VGLL4Q14135 290 aa10.22□□□□□ -0.77
SNRPA-202ENST00000596860 USP17L2Q6R6M4 530 aa10.22□□□□□ -0.77
SNRPA-202ENST00000596860 BTNL9Q6UXG8 535 aa10.22□□□□□ -0.77
SNRPA-202ENST00000596860 TEX2Q8IWB9 1127 aa10.22□□□□□ -0.77
SNRPA-202ENST00000596860 SMARCC2Q8TAQ2 1214 aa10.22□□□□□ -0.77
SNRPA-202ENST00000596860 CNKSR2Q8WXI2 1034 aa10.22□□□□□ -0.77
SNRPA-202ENST00000596860 SPZ1Q9BXG8 430 aa10.22□□□□□ -0.77
SNRPA-202ENST00000596860 SENP2Q9HC62 589 aa10.22□□□□□ -0.77
SNRPA-202ENST00000596860 GPHNQ9NQX3 736 aaPredicted RBP10.22□□□□□ -0.77
SNRPA-202ENST00000596860 DAXXQ9UER7 740 aaPredicted RBP10.22□□□□□ -0.77
SNRPA-202ENST00000596860 KCNH4Q9UQ05 1017 aa10.22□□□□□ -0.77
SNRPA-202ENST00000596860 AFG3L2Q9Y4W6 797 aa10.22□□□□□ -0.77
SNRPA-202ENST00000596860 PARP14Q460N5 1801 aa10.21□□□□□ -0.77
SNRPA-202ENST00000596860 A0A1W2PRG0 241 aa10.21□□□□□ -0.77
SNRPA-202ENST00000596860 F5H6K3 240 aa10.21□□□□□ -0.77
SNRPA-202ENST00000596860 CELF2O95319 508 aaKnown RBP10.21□□□□□ -0.77
SNRPA-202ENST00000596860 PARP1P09874 1014 aaKnown RBP10.21□□□□□ -0.77
SNRPA-202ENST00000596860 ZBTB48P10074 688 aaPredicted RBP10.21□□□□□ -0.77
SNRPA-202ENST00000596860 KLRC3Q07444 240 aa10.21□□□□□ -0.77
SNRPA-202ENST00000596860 ZNF543Q08ER8 600 aa10.21□□□□□ -0.77
SNRPA-202ENST00000596860 TTLL12Q14166 644 aaPredicted RBP10.21□□□□□ -0.77
SNRPA-202ENST00000596860 NTRK3Q16288 839 aa10.21□□□□□ -0.77
SNRPA-202ENST00000596860 COL13A1Q5TAT6 717 aaPredicted RBP10.21□□□□□ -0.77
SNRPA-202ENST00000596860 SLFN13Q68D06 897 aa10.21□□□□□ -0.77
SNRPA-202ENST00000596860 TMTC3Q6ZXV5 915 aa10.21□□□□□ -0.77
SNRPA-202ENST00000596860 MICU3Q86XE3 530 aa10.21□□□□□ -0.77
SNRPA-202ENST00000596860 TNS4Q8IZW8 715 aa10.21□□□□□ -0.77
SNRPA-202ENST00000596860 PROCA1Q8NCQ7 364 aaPredicted RBP10.21□□□□□ -0.77
SNRPA-202ENST00000596860 ZKSCAN4Q969J2 545 aaPredicted RBP10.21□□□□□ -0.77
SNRPA-202ENST00000596860 RNF26Q9BY78 433 aaPredicted RBP10.21□□□□□ -0.77
SNRPA-202ENST00000596860 CREBZFQ9NS37 354 aa10.21□□□□□ -0.77
SNRPA-202ENST00000596860 FAM217BQ9NTX9 383 aaPredicted RBP10.21□□□□□ -0.77
SNRPA-202ENST00000596860 PNMA2Q9UL42 364 aa10.21□□□□□ -0.77
SNRPA-202ENST00000596860 MYPNQ86TC9 1320 aa10.21□□□□□ -0.78
SNRPA-202ENST00000596860 hCG_1984214I3L0E3 225 aa10.2□□□□□ -0.78
SNRPA-202ENST00000596860 TRAF5O00463 557 aa10.2□□□□□ -0.78
SNRPA-202ENST00000596860 CPLX1O14810 134 aa10.2□□□□□ -0.78
SNRPA-202ENST00000596860 LARGE1O95461 756 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms