RNA–Protein interactions for RNA: ENST00000590334.5

APOC1-206, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 508 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-206ENST00000590334 TRIM75PA6NK02 468 aa14.16□□□□□ -0.14
APOC1-206ENST00000590334 GTF2A2P52657 109 aa14.16□□□□□ -0.14
APOC1-206ENST00000590334 USP14P54578 494 aa14.16□□□□□ -0.14
APOC1-206ENST00000590334 SNAPC2Q13487 334 aa14.16□□□□□ -0.14
APOC1-206ENST00000590334 MTMR2Q13614 643 aa14.16□□□□□ -0.14
APOC1-206ENST00000590334 WTAPQ15007 396 aa14.16□□□□□ -0.14
APOC1-206ENST00000590334 TMEM67Q5HYA8 995 aa14.16□□□□□ -0.14
APOC1-206ENST00000590334 IFIT1BQ5T764 474 aaKnown RBP14.16□□□□□ -0.14
APOC1-206ENST00000590334 CYP4F22Q6NT55 531 aa14.16□□□□□ -0.14
APOC1-206ENST00000590334 SGMS1Q86VZ5 419 aa14.16□□□□□ -0.14
APOC1-206ENST00000590334 TMTC2Q8N394 836 aa14.16□□□□□ -0.14
APOC1-206ENST00000590334 GMCL1P1Q8NEA9 526 aa14.16□□□□□ -0.14
APOC1-206ENST00000590334 UPF3BQ9BZI7 483 aaKnown RBP14.16□□□□□ -0.14
APOC1-206ENST00000590334 ATP2B2Q01814 1243 aa14.15□□□□□ -0.14
APOC1-206ENST00000590334 MOGSQ13724 837 aa14.15□□□□□ -0.14
APOC1-206ENST00000590334 USP17L2Q6R6M4 530 aa14.15□□□□□ -0.14
APOC1-206ENST00000590334 PROCA1Q8NCQ7 364 aaPredicted RBP14.15□□□□□ -0.14
APOC1-206ENST00000590334 LPAR1Q92633 364 aa14.15□□□□□ -0.14
APOC1-206ENST00000590334 CAPNS2Q96L46 248 aa14.15□□□□□ -0.14
APOC1-206ENST00000590334 VCPKMTQ9H867 229 aa14.15□□□□□ -0.14
APOC1-206ENST00000590334 GOPCQ9HD26 462 aa14.15□□□□□ -0.14
APOC1-206ENST00000590334 EMILIN3Q9NT22 766 aa14.15□□□□□ -0.14
APOC1-206ENST00000590334 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.15□□□□□ -0.14
APOC1-206ENST00000590334 CEP350Q5VT06 3117 aa14.15□□□□□ -0.14
APOC1-206ENST00000590334 MANSC4A6NHS7 340 aaPredicted RBP14.14□□□□□ -0.15
APOC1-206ENST00000590334 F5H6K3 240 aa14.14□□□□□ -0.15
APOC1-206ENST00000590334 CETPP11597 493 aa14.14□□□□□ -0.15
APOC1-206ENST00000590334 HMGCS2P54868 508 aa14.14□□□□□ -0.15
APOC1-206ENST00000590334 EVCP57679 992 aa14.14□□□□□ -0.15
APOC1-206ENST00000590334 INHBEP58166 350 aa14.14□□□□□ -0.15
APOC1-206ENST00000590334 HTRA3P83110 453 aa14.14□□□□□ -0.15
APOC1-206ENST00000590334 KLRC3Q07444 240 aa14.14□□□□□ -0.15
APOC1-206ENST00000590334 NOGQ13253 232 aa14.14□□□□□ -0.15
APOC1-206ENST00000590334 RABEP1Q15276 862 aa14.14□□□□□ -0.15
APOC1-206ENST00000590334 KIAA1755Q5JYT7 1200 aa14.14□□□□□ -0.15
APOC1-206ENST00000590334 Q6ZUG5 572 aa14.14□□□□□ -0.15
APOC1-206ENST00000590334 FASTKD5Q7L8L6 764 aaKnown RBP14.14□□□□□ -0.15
APOC1-206ENST00000590334 LRRC47Q8N1G4 583 aaKnown RBP14.14□□□□□ -0.15
APOC1-206ENST00000590334 PNMA1Q8ND90 353 aa14.14□□□□□ -0.15
APOC1-206ENST00000590334 GMCL1Q96IK5 515 aa14.14□□□□□ -0.15
APOC1-206ENST00000590334 TCEANC2Q96MN5 208 aa14.14□□□□□ -0.15
APOC1-206ENST00000590334 FEZ1Q99689 392 aa14.14□□□□□ -0.15
APOC1-206ENST00000590334 LRRC2Q9BYS8 371 aa14.14□□□□□ -0.15
APOC1-206ENST00000590334 KAT14Q9H8E8 782 aa14.14□□□□□ -0.15
APOC1-206ENST00000590334 SENP2Q9HC62 589 aa14.14□□□□□ -0.15
APOC1-206ENST00000590334 GPHNQ9NQX3 736 aaPredicted RBP14.14□□□□□ -0.15
APOC1-206ENST00000590334 A0A0G2JMZ2 1700 aa14.14□□□□□ -0.15
APOC1-206ENST00000590334 WDR33Q9C0J8 1336 aaKnown RBP14.14□□□□□ -0.15
APOC1-206ENST00000590334 COL11A1P12107 1806 aaPredicted RBP14.13□□□□□ -0.15
APOC1-206ENST00000590334 SNHG28P0DPA3 235 aa14.13□□□□□ -0.15
APOC1-206ENST00000590334 NEK4P51957 841 aa14.13□□□□□ -0.15
APOC1-206ENST00000590334 TOB2Q14106 344 aaPredicted RBP14.13□□□□□ -0.15
APOC1-206ENST00000590334 REM2Q8IYK8 340 aaPredicted RBP14.13□□□□□ -0.15
APOC1-206ENST00000590334 MAP3K14Q99558 947 aa14.13□□□□□ -0.15
APOC1-206ENST00000590334 PDRG1Q9NUG6 133 aa14.13□□□□□ -0.15
APOC1-206ENST00000590334 TMOD4Q9NZQ9 345 aa14.13□□□□□ -0.15
APOC1-206ENST00000590334 WDR46O15213 610 aaKnown RBP14.12□□□□□ -0.15
APOC1-206ENST00000590334 NDUFB10O96000 172 aa14.12□□□□□ -0.15
APOC1-206ENST00000590334 MAP2K2P36507 400 aa14.12□□□□□ -0.15
APOC1-206ENST00000590334 TM4SF4P48230 202 aa14.12□□□□□ -0.15
APOC1-206ENST00000590334 VEGFBP49765 207 aa14.12□□□□□ -0.15
APOC1-206ENST00000590334 TROAPQ12815 778 aa14.12□□□□□ -0.15
APOC1-206ENST00000590334 MKRN3Q13064 507 aaKnown RBP14.12□□□□□ -0.15
APOC1-206ENST00000590334 DGKZQ13574 1117 aa14.12□□□□□ -0.15
APOC1-206ENST00000590334 ZYXQ15942 572 aaKnown RBP14.12□□□□□ -0.15
APOC1-206ENST00000590334 GPAT2Q6NUI2 795 aa14.12□□□□□ -0.15
APOC1-206ENST00000590334 PAXIP1Q6ZW49 1069 aaPredicted RBP14.12□□□□□ -0.15
APOC1-206ENST00000590334 DCAF4Q8WV16 495 aa14.12□□□□□ -0.15
APOC1-206ENST00000590334 BRI3BPQ8WY22 251 aa14.12□□□□□ -0.15
APOC1-206ENST00000590334 BRF1Q92994 677 aa14.12□□□□□ -0.15
APOC1-206ENST00000590334 AGTPBP1Q9UPW5 1226 aa14.12□□□□□ -0.15
APOC1-206ENST00000590334 SLC45A1Q9Y2W3 748 aa14.12□□□□□ -0.15
APOC1-206ENST00000590334 NID2Q14112 1375 aa14.11□□□□□ -0.15
APOC1-206ENST00000590334 CCL15-CCL14A0A0B4J2E2 113 aa14.11□□□□□ -0.15
APOC1-206ENST00000590334 CCDC69A6NI79 296 aa14.11□□□□□ -0.15
APOC1-206ENST00000590334 DDAH1O94760 285 aa14.11□□□□□ -0.15
APOC1-206ENST00000590334 PDHBP11177 359 aa14.11□□□□□ -0.15
APOC1-206ENST00000590334 VCAM1P19320 739 aa14.11□□□□□ -0.15
APOC1-206ENST00000590334 HOXA7P31268 230 aaPredicted RBP14.11□□□□□ -0.15
APOC1-206ENST00000590334 RCAN1P53805 252 aa14.11□□□□□ -0.15
APOC1-206ENST00000590334 FGD1P98174 961 aa14.11□□□□□ -0.15
APOC1-206ENST00000590334 SREBF2Q12772 1141 aa14.11□□□□□ -0.15
APOC1-206ENST00000590334 ANKRD1Q15327 319 aa14.11□□□□□ -0.15
APOC1-206ENST00000590334 CCL15Q16663 113 aa14.11□□□□□ -0.15
APOC1-206ENST00000590334 SLFN13Q68D06 897 aa14.11□□□□□ -0.15
APOC1-206ENST00000590334 APOA5Q6Q788 366 aa14.11□□□□□ -0.15
APOC1-206ENST00000590334 CATIPQ7Z7H3 387 aa14.11□□□□□ -0.15
APOC1-206ENST00000590334 ANKRD23Q86SG2 305 aa14.11□□□□□ -0.15
APOC1-206ENST00000590334 ZNF654Q8IZM8 581 aa14.11□□□□□ -0.15
APOC1-206ENST00000590334 PTPN18Q99952 460 aa14.11□□□□□ -0.15
APOC1-206ENST00000590334 ZCCHC17Q9NP64 241 aaKnown RBP14.11□□□□□ -0.15
APOC1-206ENST00000590334 BRPF3Q9ULD4 1205 aa14.11□□□□□ -0.15
APOC1-206ENST00000590334 MYH6P13533 1939 aa14.11□□□□□ -0.15
APOC1-206ENST00000590334 PLA2G6O60733 806 aa14.1□□□□□ -0.15
APOC1-206ENST00000590334 AOC2O75106 756 aa14.1□□□□□ -0.15
APOC1-206ENST00000590334 CALM1P0DP23 149 aa14.1□□□□□ -0.15
APOC1-206ENST00000590334 CALM2P0DP24 149 aa14.1□□□□□ -0.15
APOC1-206ENST00000590334 CALM3P0DP25 149 aa14.1□□□□□ -0.15
APOC1-206ENST00000590334 AK2P54819 239 aa14.1□□□□□ -0.15
APOC1-206ENST00000590334 KIF23Q02241 960 aaPredicted RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms