RNA–Protein interactions for RNA: ENST00000590315.5

DDX39A-213, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-213ENST00000590315 WTAPQ15007 396 aa15.11■□□□□ 0.01
DDX39A-213ENST00000590315 IFIT1BQ5T764 474 aaKnown RBP15.11■□□□□ 0.01
DDX39A-213ENST00000590315 NFXL1Q6ZNB6 911 aa15.11■□□□□ 0.01
DDX39A-213ENST00000590315 REM2Q8IYK8 340 aaPredicted RBP15.11■□□□□ 0.01
DDX39A-213ENST00000590315 PROCA1Q8NCQ7 364 aaPredicted RBP15.11■□□□□ 0.01
DDX39A-213ENST00000590315 MS4A4AQ96JQ5 239 aa15.11■□□□□ 0.01
DDX39A-213ENST00000590315 TCEANC2Q96MN5 208 aa15.11■□□□□ 0.01
DDX39A-213ENST00000590315 LRRC2Q9BYS8 371 aa15.11■□□□□ 0.01
DDX39A-213ENST00000590315 TMX2Q9Y320 296 aa15.11■□□□□ 0.01
DDX39A-213ENST00000590315 BTBD19C9JJ37 291 aa15.1■□□□□ 0.01
DDX39A-213ENST00000590315 HMGB1P09429 215 aaKnown RBP15.1■□□□□ 0.01
DDX39A-213ENST00000590315 TOP1P11387 765 aaKnown RBP15.1■□□□□ 0.01
DDX39A-213ENST00000590315 CPA1P15085 419 aa15.1■□□□□ 0.01
DDX39A-213ENST00000590315 INHBEP58166 350 aa15.1■□□□□ 0.01
DDX39A-213ENST00000590315 IRX3P78415 501 aaPredicted RBP15.1■□□□□ 0.01
DDX39A-213ENST00000590315 PABPC4Q13310 644 aaKnown RBP eCLIP15.1■□□□□ 0.01
DDX39A-213ENST00000590315 CCDC96Q2M329 555 aa15.1■□□□□ 0.01
DDX39A-213ENST00000590315 TREML2Q5T2D2 321 aa15.1■□□□□ 0.01
DDX39A-213ENST00000590315 IFNL1Q8IU54 200 aa15.1■□□□□ 0.01
DDX39A-213ENST00000590315 TMEM47Q9BQJ4 181 aa15.1■□□□□ 0.01
DDX39A-213ENST00000590315 VCPKMTQ9H867 229 aa15.1■□□□□ 0.01
DDX39A-213ENST00000590315 TCP11L1Q9NUJ3 509 aa15.1■□□□□ 0.01
DDX39A-213ENST00000590315 NAP1L2Q9ULW6 460 aaPredicted RBP15.1■□□□□ 0.01
DDX39A-213ENST00000590315 AGTPBP1Q9UPW5 1226 aa15.1■□□□□ 0.01
DDX39A-213ENST00000590315 MGAMO43451 1857 aa15.1■□□□□ 0.01
DDX39A-213ENST00000590315 PDHXO00330 501 aa15.09■□□□□ 0.01
DDX39A-213ENST00000590315 IGF2BP3O00425 579 aaKnown RBP eCLIP15.09■□□□□ 0.01
DDX39A-213ENST00000590315 VCAM1P19320 739 aa15.09■□□□□ 0.01
DDX39A-213ENST00000590315 ANTXR2P58335 489 aa15.09■□□□□ 0.01
DDX39A-213ENST00000590315 IKQ13123 557 aaPredicted RBP15.09■□□□□ 0.01
DDX39A-213ENST00000590315 TAF1CQ15572 869 aaPredicted RBP15.09■□□□□ 0.01
DDX39A-213ENST00000590315 TSGA10IPQ3SY00 556 aa15.09■□□□□ 0.01
DDX39A-213ENST00000590315 SH3D19Q5HYK7 790 aa15.09■□□□□ 0.01
DDX39A-213ENST00000590315 SLFN13Q68D06 897 aa15.09■□□□□ 0.01
DDX39A-213ENST00000590315 SIAH1Q8IUQ4 282 aa15.09■□□□□ 0.01
DDX39A-213ENST00000590315 FAM43AQ8N2R8 423 aa15.09■□□□□ 0.01
DDX39A-213ENST00000590315 ENAHQ8N8S7 591 aaPredicted RBP15.09■□□□□ 0.01
DDX39A-213ENST00000590315 NUP88Q99567 741 aaPredicted RBP15.09■□□□□ 0.01
DDX39A-213ENST00000590315 C22orf23Q9BZE7 217 aa15.09■□□□□ 0.01
DDX39A-213ENST00000590315 RPAP3Q9H6T3 665 aaPredicted RBP15.09■□□□□ 0.01
DDX39A-213ENST00000590315 EMILIN3Q9NT22 766 aa15.09■□□□□ 0.01
DDX39A-213ENST00000590315 PNMA3Q9UL41 463 aa15.09■□□□□ 0.01
DDX39A-213ENST00000590315 RLFQ13129 1914 aa15.08■□□□□ 0
DDX39A-213ENST00000590315 CCDC69A6NI79 296 aa15.08■□□□□ 0
DDX39A-213ENST00000590315 F5H6K3 240 aa15.08■□□□□ 0
DDX39A-213ENST00000590315 NDUFB10O96000 172 aa15.08■□□□□ 0
DDX39A-213ENST00000590315 OSBPP22059 807 aa15.08■□□□□ 0
DDX39A-213ENST00000590315 MAP2K1Q02750 393 aaPredicted RBP15.08■□□□□ 0
DDX39A-213ENST00000590315 KLRC3Q07444 240 aa15.08■□□□□ 0
DDX39A-213ENST00000590315 FAM83BQ5T0W9 1011 aa15.08■□□□□ 0
DDX39A-213ENST00000590315 DHX32Q7L7V1 743 aaKnown RBP15.08■□□□□ 0
DDX39A-213ENST00000590315 ANKRD23Q86SG2 305 aa15.08■□□□□ 0
DDX39A-213ENST00000590315 DGKHQ86XP1 1220 aa15.08■□□□□ 0
DDX39A-213ENST00000590315 DNAJC5GQ8N7S2 189 aa15.08■□□□□ 0
DDX39A-213ENST00000590315 PNMA1Q8ND90 353 aa15.08■□□□□ 0
DDX39A-213ENST00000590315 SMCR8Q8TEV9 937 aaPredicted RBP15.08■□□□□ 0
DDX39A-213ENST00000590315 LPAR1Q92633 364 aa15.08■□□□□ 0
DDX39A-213ENST00000590315 KCNB2Q92953 911 aa15.08■□□□□ 0
DDX39A-213ENST00000590315 TMEM87BQ96K49 555 aa15.08■□□□□ 0
DDX39A-213ENST00000590315 TTC14Q96N46 770 aa15.08■□□□□ 0
DDX39A-213ENST00000590315 BACH2Q9BYV9 841 aa15.08■□□□□ 0
DDX39A-213ENST00000590315 UPF3BQ9BZI7 483 aaKnown RBP15.08■□□□□ 0
DDX39A-213ENST00000590315 CYP46A1Q9Y6A2 500 aa15.08■□□□□ 0
DDX39A-213ENST00000590315 A0A0G2JMZ2 1700 aa15.07■□□□□ 0
DDX39A-213ENST00000590315 TESPA1A2RU30 521 aaPredicted RBP15.07■□□□□ 0
DDX39A-213ENST00000590315 WDR46O15213 610 aaKnown RBP15.07■□□□□ 0
DDX39A-213ENST00000590315 TRPA1O75762 1119 aa15.07■□□□□ 0
DDX39A-213ENST00000590315 ALDH1A1P00352 501 aa15.07■□□□□ 0
DDX39A-213ENST00000590315 RPS6KB1P23443 525 aa15.07■□□□□ 0
DDX39A-213ENST00000590315 SLC1A4P43007 532 aa15.07■□□□□ 0
DDX39A-213ENST00000590315 TM4SF4P48230 202 aa15.07■□□□□ 0
DDX39A-213ENST00000590315 RASGRP2Q7LDG7 609 aa15.07■□□□□ 0
DDX39A-213ENST00000590315 C12orf42Q96LP6 360 aa15.07■□□□□ 0
DDX39A-213ENST00000590315 PARK7Q99497 189 aaKnown RBP15.07■□□□□ 0
DDX39A-213ENST00000590315 PTPN18Q99952 460 aa15.07■□□□□ 0
DDX39A-213ENST00000590315 FRMPD2Q68DX3 1309 aaPredicted RBP15.07■□□□□ 0
DDX39A-213ENST00000590315 USP17L15C9J2P7 530 aa15.06■□□□□ 0
DDX39A-213ENST00000590315 USP17L13C9JLJ4 530 aa15.06■□□□□ 0
DDX39A-213ENST00000590315 USP17L11C9JVI0 530 aa15.06■□□□□ 0
DDX39A-213ENST00000590315 USP17L18D6R9N7 530 aa15.06■□□□□ 0
DDX39A-213ENST00000590315 USP17L22D6RA61 530 aa15.06■□□□□ 0
DDX39A-213ENST00000590315 USP17L17D6RBQ6 530 aa15.06■□□□□ 0
DDX39A-213ENST00000590315 USP17L19D6RCP7 530 aa15.06■□□□□ 0
DDX39A-213ENST00000590315 USP17L20D6RJB6 530 aa15.06■□□□□ 0
DDX39A-213ENST00000590315 SH2B2O14492 632 aaPredicted RBP15.06■□□□□ 0
DDX39A-213ENST00000590315 FLOT1O75955 427 aa15.06■□□□□ 0
DDX39A-213ENST00000590315 BMP3P12645 472 aa15.06■□□□□ 0
DDX39A-213ENST00000590315 ANAPC15P60006 121 aa15.06■□□□□ 0
DDX39A-213ENST00000590315 USP17L24Q0WX57 530 aa15.06■□□□□ 0
DDX39A-213ENST00000590315 MOGSQ13724 837 aa15.06■□□□□ 0
DDX39A-213ENST00000590315 COL9A3Q14050 684 aaPredicted RBP15.06■□□□□ 0
DDX39A-213ENST00000590315 SEC23AQ15436 765 aa15.06■□□□□ 0
DDX39A-213ENST00000590315 KIAA1755Q5JYT7 1200 aa15.06■□□□□ 0
DDX39A-213ENST00000590315 RCSD1Q6JBY9 416 aa15.06■□□□□ 0
DDX39A-213ENST00000590315 GPAT2Q6NUI2 795 aa15.06■□□□□ 0
DDX39A-213ENST00000590315 SYNE3Q6ZMZ3 975 aa15.06■□□□□ 0
DDX39A-213ENST00000590315 Q6ZUG5 572 aa15.06■□□□□ 0
DDX39A-213ENST00000590315 CATIPQ7Z7H3 387 aa15.06■□□□□ 0
DDX39A-213ENST00000590315 GMCL1P1Q8NEA9 526 aa15.06■□□□□ 0
DDX39A-213ENST00000590315 NUP133Q8WUM0 1156 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms