RNA–Protein interactions for RNA: ENST00000590039.5

CARM1-208, Transcript of coactivator associated arginine methyltransferase 1, human

TSL 5

Gene CARM1, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CARM1-208	ENST00000590039	CYBA	P13498	195 aa		13.68	□□□□□ -0.22
CARM1-208	ENST00000590039	IRX6	P78412	446 aa	Predicted RBP	13.68	□□□□□ -0.22
CARM1-208	ENST00000590039	SPP2	Q13103	211 aa		13.68	□□□□□ -0.22
CARM1-208	ENST00000590039	PI16	Q6UXB8	463 aa		13.68	□□□□□ -0.22
CARM1-208	ENST00000590039	AACS	Q86V21	672 aa		13.68	□□□□□ -0.22
CARM1-208	ENST00000590039	CLASRP	Q8N2M8	674 aa	Known RBP	13.68	□□□□□ -0.22
CARM1-208	ENST00000590039	ZNF512B	Q96KM6	892 aa	Predicted RBP	13.68	□□□□□ -0.22
CARM1-208	ENST00000590039	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	13.68	□□□□□ -0.22
CARM1-208	ENST00000590039	EPG5	Q9HCE0	2579 aa		13.68	□□□□□ -0.22
CARM1-208	ENST00000590039	SALL1	Q9NSC2	1324 aa		13.67	□□□□□ -0.22
CARM1-208	ENST00000590039	ZFHX4	Q86UP3	3567 aa		13.67	□□□□□ -0.22
CARM1-208	ENST00000590039	SMARCA5	O60264	1052 aa	Predicted RBP	13.67	□□□□□ -0.22
CARM1-208	ENST00000590039	IGHA2	P01877	340 aa		13.67	□□□□□ -0.22
CARM1-208	ENST00000590039	CYP2C19	P33261	490 aa		13.67	□□□□□ -0.22
CARM1-208	ENST00000590039	MCAM	P43121	646 aa		13.67	□□□□□ -0.22
CARM1-208	ENST00000590039	ERVK-9	P63128	1117 aa		13.67	□□□□□ -0.22
CARM1-208	ENST00000590039	ERVK-24	P63145	666 aa		13.67	□□□□□ -0.22
CARM1-208	ENST00000590039	IRX3	P78415	501 aa	Predicted RBP	13.67	□□□□□ -0.22
CARM1-208	ENST00000590039		Q3C1V9	767 aa		13.67	□□□□□ -0.22
CARM1-208	ENST00000590039	TTC39A	Q5SRH9	613 aa		13.67	□□□□□ -0.22
CARM1-208	ENST00000590039	SH3BP5L	Q7L8J4	393 aa		13.67	□□□□□ -0.22
CARM1-208	ENST00000590039	SPATA5	Q8NB90	893 aa		13.67	□□□□□ -0.22
CARM1-208	ENST00000590039	ZNF280C	Q8ND82	737 aa		13.67	□□□□□ -0.22
CARM1-208	ENST00000590039	ANKS1A	Q92625	1134 aa		13.67	□□□□□ -0.22
CARM1-208	ENST00000590039	EDC3	Q96F86	508 aa	Known RBP	13.67	□□□□□ -0.22
CARM1-208	ENST00000590039	LRRCC1	Q9C099	1032 aa		13.67	□□□□□ -0.22
CARM1-208	ENST00000590039	BCL11A	Q9H165	835 aa		13.67	□□□□□ -0.22
CARM1-208	ENST00000590039	TMEM39A	Q9NV64	488 aa		13.67	□□□□□ -0.22
CARM1-208	ENST00000590039	RBPJL	Q9UBG7	517 aa		13.67	□□□□□ -0.22
CARM1-208	ENST00000590039	MTCH2	Q9Y6C9	303 aa		13.67	□□□□□ -0.22
CARM1-208	ENST00000590039	ATAD5	Q96QE3	1844 aa		13.67	□□□□□ -0.22
CARM1-208	ENST00000590039	PDS5A	Q29RF7	1337 aa	Known RBP	13.66	□□□□□ -0.22
CARM1-208	ENST00000590039	PQBP1	O60828	265 aa	Known RBP	13.66	□□□□□ -0.22
CARM1-208	ENST00000590039	MYCN	P04198	464 aa	Predicted RBP	13.66	□□□□□ -0.22
CARM1-208	ENST00000590039	POU3F3	P20264	500 aa	Predicted RBP	13.66	□□□□□ -0.22
CARM1-208	ENST00000590039	PRDX5	P30044	214 aa		13.66	□□□□□ -0.22
CARM1-208	ENST00000590039	HERVK_113	P62684	666 aa		13.66	□□□□□ -0.22
CARM1-208	ENST00000590039	LRRC41	Q15345	812 aa		13.66	□□□□□ -0.22
CARM1-208	ENST00000590039	SH3D19	Q5HYK7	790 aa		13.66	□□□□□ -0.22
CARM1-208	ENST00000590039	ANO1	Q5XXA6	986 aa		13.66	□□□□□ -0.22
CARM1-208	ENST00000590039	TBC1D9	Q6ZT07	1266 aa		13.66	□□□□□ -0.22
CARM1-208	ENST00000590039	HLA-C	Q95604	372 aa		13.66	□□□□□ -0.22
CARM1-208	ENST00000590039	SNRK	Q9NRH2	765 aa		13.66	□□□□□ -0.22
CARM1-208	ENST00000590039	RFX7	Q2KHR2	1363 aa		13.66	□□□□□ -0.22
CARM1-208	ENST00000590039	KMT2B	Q9UMN6	2715 aa	Predicted RBP	13.65	□□□□□ -0.22
CARM1-208	ENST00000590039	LDHB	P07195	334 aa	Known RBP	13.65	□□□□□ -0.22
CARM1-208	ENST00000590039	IFIT2	P09913	472 aa	Known RBP	13.65	□□□□□ -0.22
CARM1-208	ENST00000590039	ALAD	P13716	330 aa		13.65	□□□□□ -0.22
CARM1-208	ENST00000590039	FAAP100	Q0VG06	881 aa		13.65	□□□□□ -0.22
CARM1-208	ENST00000590039	HDAC1	Q13547	482 aa	Predicted RBP	13.65	□□□□□ -0.22
CARM1-208	ENST00000590039	CCAR1	Q8IX12	1150 aa	Known RBP	13.65	□□□□□ -0.22
CARM1-208	ENST00000590039	SLC44A5	Q8NCS7	719 aa		13.65	□□□□□ -0.22
CARM1-208	ENST00000590039	ABCF2	Q9UG63	623 aa		13.65	□□□□□ -0.22
CARM1-208	ENST00000590039	PHF24	Q9UPV7	400 aa		13.65	□□□□□ -0.22
CARM1-208	ENST00000590039	TIMP1	P01033	207 aa		13.64	□□□□□ -0.23
CARM1-208	ENST00000590039	IGHD	P01880	384 aa		13.64	□□□□□ -0.23
CARM1-208	ENST00000590039	CYP2E1	P05181	493 aa	Predicted RBP	13.64	□□□□□ -0.23
CARM1-208	ENST00000590039	HOXC6	P09630	235 aa		13.64	□□□□□ -0.23
CARM1-208	ENST00000590039	HOXA7	P31268	230 aa	Predicted RBP	13.64	□□□□□ -0.23
CARM1-208	ENST00000590039	ZAP70	P43403	619 aa		13.64	□□□□□ -0.23
CARM1-208	ENST00000590039	RGS3	P49796	1198 aa		13.64	□□□□□ -0.23
CARM1-208	ENST00000590039	ATP2B2	Q01814	1243 aa		13.64	□□□□□ -0.23
CARM1-208	ENST00000590039	PPIG	Q13427	754 aa	Known RBP eCLIP	13.64	□□□□□ -0.23	3e-10	■■■□□ 18.3
CARM1-208	ENST00000590039	DIXDC1	Q155Q3	683 aa		13.64	□□□□□ -0.23
CARM1-208	ENST00000590039	PPP2R2D	Q66LE6	453 aa		13.64	□□□□□ -0.23
CARM1-208	ENST00000590039	MFSD5	Q6N075	450 aa		13.64	□□□□□ -0.23
CARM1-208	ENST00000590039	CCDC174	Q6PII3	467 aa		13.64	□□□□□ -0.23
CARM1-208	ENST00000590039	GJD3	Q8N144	294 aa		13.64	□□□□□ -0.23
CARM1-208	ENST00000590039	ZGPAT	Q8N5A5	531 aa	Known RBP	13.64	□□□□□ -0.23
CARM1-208	ENST00000590039	USP40	Q9NVE5	1235 aa		13.64	□□□□□ -0.23
CARM1-208	ENST00000590039	MYO15A	Q9UKN7	3530 aa		13.64	□□□□□ -0.23
CARM1-208	ENST00000590039	BAHCC1	Q9P281	2608 aa		13.64	□□□□□ -0.23
CARM1-208	ENST00000590039	DDTL	A6NHG4	134 aa	Predicted RBP	13.63	□□□□□ -0.23
CARM1-208	ENST00000590039	ENTPD3	O75355	529 aa		13.63	□□□□□ -0.23
CARM1-208	ENST00000590039	SPTY2D1	Q68D10	685 aa	Predicted RBP	13.63	□□□□□ -0.23
CARM1-208	ENST00000590039	PSRC1	Q6PGN9	363 aa	Predicted RBP	13.63	□□□□□ -0.23
CARM1-208	ENST00000590039	ZNF365	Q70YC5	407 aa		13.63	□□□□□ -0.23
CARM1-208	ENST00000590039	NPLOC4	Q8TAT6	608 aa		13.63	□□□□□ -0.23
CARM1-208	ENST00000590039	TBC1D2	Q9BYX2	928 aa		13.63	□□□□□ -0.23
CARM1-208	ENST00000590039	TBX21	Q9UL17	535 aa		13.63	□□□□□ -0.23
CARM1-208	ENST00000590039	TRIO	O75962	3097 aa		13.63	□□□□□ -0.23
CARM1-208	ENST00000590039	SEPT4	O43236	478 aa		13.62	□□□□□ -0.23
CARM1-208	ENST00000590039	GTPBP6	O43824	516 aa	Predicted RBP	13.62	□□□□□ -0.23
CARM1-208	ENST00000590039	MECOM	Q03112	1051 aa		13.62	□□□□□ -0.23
CARM1-208	ENST00000590039	FAM47A	Q5JRC9	791 aa		13.62	□□□□□ -0.23
CARM1-208	ENST00000590039	KRT40	Q6A162	431 aa		13.62	□□□□□ -0.23
CARM1-208	ENST00000590039	ERICH6	Q7L0X2	663 aa		13.62	□□□□□ -0.23
CARM1-208	ENST00000590039	ERMP1	Q7Z2K6	904 aa		13.62	□□□□□ -0.23
CARM1-208	ENST00000590039	ANKRD33	Q7Z3H0	272 aa		13.62	□□□□□ -0.23
CARM1-208	ENST00000590039	FAM178B	Q8IXR5	827 aa		13.62	□□□□□ -0.23
CARM1-208	ENST00000590039	PRSS33	Q8NF86	280 aa		13.62	□□□□□ -0.23
CARM1-208	ENST00000590039	ZNF384	Q8TF68	577 aa		13.62	□□□□□ -0.23
CARM1-208	ENST00000590039	FAM163A	Q96GL9	167 aa	Predicted RBP	13.62	□□□□□ -0.23
CARM1-208	ENST00000590039	PAGR1	Q9BTK6	254 aa		13.62	□□□□□ -0.23
CARM1-208	ENST00000590039	IDI2	Q9BXS1	227 aa		13.62	□□□□□ -0.23
CARM1-208	ENST00000590039	RWDD1	Q9H446	243 aa	Predicted RBP	13.62	□□□□□ -0.23
CARM1-208	ENST00000590039	NDUFB9	Q9Y6M9	179 aa		13.62	□□□□□ -0.23
CARM1-208	ENST00000590039	PKD1L2	Q7Z442	2459 aa		13.62	□□□□□ -0.23
CARM1-208	ENST00000590039	MYH13	Q9UKX3	1938 aa		13.61	□□□□□ -0.23
CARM1-208	ENST00000590039	PTPRZ1	P23471	2315 aa	Predicted RBP	13.61	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms