RNA–Protein interactions for RNA: ENST00000589729.1

AC040963.1-202, humanhuman

TSL 5 BASIC

Gene AC040963.1, Length 644 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC040963.1-202ENST00000589729 CLIP2Q9UDT6 1046 aa19.86■□□□□ 0.77
AC040963.1-202ENST00000589729 TLR2O60603 784 aa19.85■□□□□ 0.77
AC040963.1-202ENST00000589729 SAMD1Q6SPF0 538 aaPredicted RBP19.85■□□□□ 0.77
AC040963.1-202ENST00000589729 MFSD6Q6ZSS7 791 aa19.85■□□□□ 0.77
AC040963.1-202ENST00000589729 SMCR8Q8TEV9 937 aaPredicted RBP19.85■□□□□ 0.77
AC040963.1-202ENST00000589729 MAP4K1Q92918 833 aa19.85■□□□□ 0.77
AC040963.1-202ENST00000589729 VCPKMTQ9H867 229 aa19.85■□□□□ 0.77
AC040963.1-202ENST00000589729 PRDM10Q9NQV6 1147 aa19.85■□□□□ 0.77
AC040963.1-202ENST00000589729 CTNNA3Q9UI47 895 aa19.85■□□□□ 0.77
AC040963.1-202ENST00000589729 TMX2Q9Y320 296 aa19.85■□□□□ 0.77
AC040963.1-202ENST00000589729 U3KPZ7 1027 aaPredicted RBP19.85■□□□□ 0.77
AC040963.1-202ENST00000589729 KDM4AO75164 1064 aa19.84■□□□□ 0.77
AC040963.1-202ENST00000589729 CTGFP29279 349 aa19.84■□□□□ 0.77
AC040963.1-202ENST00000589729 USP14P54578 494 aa19.84■□□□□ 0.77
AC040963.1-202ENST00000589729 IRX3P78415 501 aaPredicted RBP19.84■□□□□ 0.77
AC040963.1-202ENST00000589729 ANKRD13CQ8N6S4 541 aa19.84■□□□□ 0.77
AC040963.1-202ENST00000589729 TANGO6Q9C0B7 1094 aa19.84■□□□□ 0.77
AC040963.1-202ENST00000589729 MTMR7Q9Y216 660 aa19.84■□□□□ 0.77
AC040963.1-202ENST00000589729 SLC45A1Q9Y2W3 748 aa19.84■□□□□ 0.77
AC040963.1-202ENST00000589729 FKTNO75072 461 aa19.83■□□□□ 0.77
AC040963.1-202ENST00000589729 NDUFB10O96000 172 aa19.83■□□□□ 0.77
AC040963.1-202ENST00000589729 FAM83BQ5T0W9 1011 aa19.83■□□□□ 0.77
AC040963.1-202ENST00000589729 C17orf99Q6UX52 265 aa19.83■□□□□ 0.77
AC040963.1-202ENST00000589729 KIAA1211Q6ZU35 1233 aa19.83■□□□□ 0.77
AC040963.1-202ENST00000589729 P2RX7Q99572 595 aaKnown RBP19.83■□□□□ 0.77
AC040963.1-202ENST00000589729 TXNRD2Q9NNW7 524 aa19.83■□□□□ 0.77
AC040963.1-202ENST00000589729 NYAP2Q9P242 653 aa19.83■□□□□ 0.77
AC040963.1-202ENST00000589729 STX8Q9UNK0 236 aa19.83■□□□□ 0.77
AC040963.1-202ENST00000589729 HTTP42858 3142 aa19.82■□□□□ 0.76
AC040963.1-202ENST00000589729 TTLL1O95922 423 aa19.82■□□□□ 0.76
AC040963.1-202ENST00000589729 BCRP11274 1271 aa19.82■□□□□ 0.76
AC040963.1-202ENST00000589729 HERVK_113P62684 666 aa19.82■□□□□ 0.76
AC040963.1-202ENST00000589729 CASC1Q6TDU7 716 aa19.82■□□□□ 0.76
AC040963.1-202ENST00000589729 CYB5R4Q7L1T6 521 aa19.82■□□□□ 0.76
AC040963.1-202ENST00000589729 RNF41Q9H4P4 317 aaPredicted RBP19.82■□□□□ 0.76
AC040963.1-202ENST00000589729 FBXO28Q9NVF7 368 aa19.82■□□□□ 0.76
AC040963.1-202ENST00000589729 PNMA3Q9UL41 463 aa19.82■□□□□ 0.76
AC040963.1-202ENST00000589729 SLC27A2O14975 620 aa19.81■□□□□ 0.76
AC040963.1-202ENST00000589729 OSBPP22059 807 aa19.81■□□□□ 0.76
AC040963.1-202ENST00000589729 HOXA7P31268 230 aaPredicted RBP19.81■□□□□ 0.76
AC040963.1-202ENST00000589729 SP3Q02447 781 aa19.81■□□□□ 0.76
AC040963.1-202ENST00000589729 SH2D4AQ9H788 454 aa19.81■□□□□ 0.76
AC040963.1-202ENST00000589729 SPDYE16A6NNV3 312 aaPredicted RBP19.8■□□□□ 0.76
AC040963.1-202ENST00000589729 USP17L15C9J2P7 530 aa19.8■□□□□ 0.76
AC040963.1-202ENST00000589729 USP17L13C9JLJ4 530 aa19.8■□□□□ 0.76
AC040963.1-202ENST00000589729 USP17L11C9JVI0 530 aa19.8■□□□□ 0.76
AC040963.1-202ENST00000589729 USP17L18D6R9N7 530 aa19.8■□□□□ 0.76
AC040963.1-202ENST00000589729 USP17L22D6RA61 530 aa19.8■□□□□ 0.76
AC040963.1-202ENST00000589729 USP17L17D6RBQ6 530 aa19.8■□□□□ 0.76
AC040963.1-202ENST00000589729 USP17L19D6RCP7 530 aa19.8■□□□□ 0.76
AC040963.1-202ENST00000589729 USP17L20D6RJB6 530 aa19.8■□□□□ 0.76
AC040963.1-202ENST00000589729 E7EWF7 191 aa19.8■□□□□ 0.76
AC040963.1-202ENST00000589729 USP17L24Q0WX57 530 aa19.8■□□□□ 0.76
AC040963.1-202ENST00000589729 PABPC4Q13310 644 aaKnown RBP eCLIP19.8■□□□□ 0.76
AC040963.1-202ENST00000589729 CREB3L3Q68CJ9 461 aa19.8■□□□□ 0.76
AC040963.1-202ENST00000589729 RCSD1Q6JBY9 416 aa19.8■□□□□ 0.76
AC040963.1-202ENST00000589729 CATSPERGQ6ZRH7 1159 aa19.8■□□□□ 0.76
AC040963.1-202ENST00000589729 CHST3Q7LGC8 479 aa19.8■□□□□ 0.76
AC040963.1-202ENST00000589729 ESR2Q92731 530 aa19.8■□□□□ 0.76
AC040963.1-202ENST00000589729 PAGR1Q9BTK6 254 aa19.8■□□□□ 0.76
AC040963.1-202ENST00000589729 GOPCQ9HD26 462 aa19.8■□□□□ 0.76
AC040963.1-202ENST00000589729 DOCK3Q8IZD9 2030 aa19.8■□□□□ 0.76
AC040963.1-202ENST00000589729 PLXNB2O15031 1838 aa19.79■□□□□ 0.76
AC040963.1-202ENST00000589729 F5H6K3 240 aa19.79■□□□□ 0.76
AC040963.1-202ENST00000589729 CNMDO75829 334 aa19.79■□□□□ 0.76
AC040963.1-202ENST00000589729 KLRC3Q07444 240 aa19.79■□□□□ 0.76
AC040963.1-202ENST00000589729 NOM1Q5C9Z4 860 aaKnown RBP19.79■□□□□ 0.76
AC040963.1-202ENST00000589729 ISY1Q9ULR0 285 aaKnown RBP19.79■□□□□ 0.76
AC040963.1-202ENST00000589729 GTF3C3Q9Y5Q9 886 aa19.79■□□□□ 0.76
AC040963.1-202ENST00000589729 WDR46O15213 610 aaKnown RBP19.78■□□□□ 0.76
AC040963.1-202ENST00000589729 FLOT1O75955 427 aa19.78■□□□□ 0.76
AC040963.1-202ENST00000589729 PCP11498 1178 aaKnown RBP19.78■□□□□ 0.76
AC040963.1-202ENST00000589729 LACTBP83111 547 aaPredicted RBP19.78■□□□□ 0.76
AC040963.1-202ENST00000589729 SLFN13Q68D06 897 aa19.78■□□□□ 0.76
AC040963.1-202ENST00000589729 LPAR1Q92633 364 aa19.78■□□□□ 0.76
AC040963.1-202ENST00000589729 ATG4CQ96DT6 458 aa19.78■□□□□ 0.76
AC040963.1-202ENST00000589729 TMEM47Q9BQJ4 181 aa19.78■□□□□ 0.76
AC040963.1-202ENST00000589729 SENP2Q9HC62 589 aa19.78■□□□□ 0.76
AC040963.1-202ENST00000589729 ZSWIM5Q9P217 1185 aa19.78■□□□□ 0.76
AC040963.1-202ENST00000589729 TNKSO95271 1327 aa19.77■□□□□ 0.76
AC040963.1-202ENST00000589729 NOVP48745 357 aa19.77■□□□□ 0.76
AC040963.1-202ENST00000589729 ANTXR2P58335 489 aa19.77■□□□□ 0.76
AC040963.1-202ENST00000589729 NECTIN1Q15223 517 aa19.77■□□□□ 0.76
AC040963.1-202ENST00000589729 ENAHQ8N8S7 591 aaPredicted RBP19.77■□□□□ 0.76
AC040963.1-202ENST00000589729 TRIM47Q96LD4 638 aa19.77■□□□□ 0.76
AC040963.1-202ENST00000589729 BTBD7Q9P203 1132 aa19.77■□□□□ 0.76
AC040963.1-202ENST00000589729 RBPJLQ9UBG7 517 aa19.77■□□□□ 0.76
AC040963.1-202ENST00000589729 TRIM17Q9Y577 477 aa19.77■□□□□ 0.76
AC040963.1-202ENST00000589729 FRMPD2Q68DX3 1309 aaPredicted RBP19.76■□□□□ 0.75
AC040963.1-202ENST00000589729 MCCP23508 829 aa19.76■□□□□ 0.75
AC040963.1-202ENST00000589729 OTOP1Q7RTM1 612 aa19.76■□□□□ 0.75
AC040963.1-202ENST00000589729 RASEFQ8IZ41 740 aa19.76■□□□□ 0.75
AC040963.1-202ENST00000589729 GMCL1P1Q8NEA9 526 aa19.76■□□□□ 0.75
AC040963.1-202ENST00000589729 MKL1Q969V6 931 aa19.76■□□□□ 0.75
AC040963.1-202ENST00000589729 ERO1AQ96HE7 468 aa19.76■□□□□ 0.75
AC040963.1-202ENST00000589729 KRT23Q9C075 422 aa19.76■□□□□ 0.75
AC040963.1-202ENST00000589729 MCOLN1Q9GZU1 580 aa19.76■□□□□ 0.75
AC040963.1-202ENST00000589729 GPHNQ9NQX3 736 aaPredicted RBP19.76■□□□□ 0.75
AC040963.1-202ENST00000589729 FAM110CQ1W6H9 321 aa19.75■□□□□ 0.75
AC040963.1-202ENST00000589729 Q3C1V9 767 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms