RNA–Protein interactions for RNA: ENST00000589078.1

APOC1-204, Transcript of apolipoprotein C1, humanhuman

TSL 2

Gene APOC1, Length 213 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-204ENST00000589078 SPTBN5Q9NRC6 3674 aaKnown RBP11.48□□□□□ -0.57
APOC1-204ENST00000589078 INHAP05111 366 aa11.48□□□□□ -0.57
APOC1-204ENST00000589078 AKR1B1P15121 316 aa11.48□□□□□ -0.57
APOC1-204ENST00000589078 ELNP15502 786 aa11.48□□□□□ -0.57
APOC1-204ENST00000589078 ICA1Q05084 483 aa11.48□□□□□ -0.57
APOC1-204ENST00000589078 MOGSQ13724 837 aa11.48□□□□□ -0.57
APOC1-204ENST00000589078 SEPT2Q15019 361 aa11.48□□□□□ -0.57
APOC1-204ENST00000589078 BMP2KLQ5H9B9 411 aa11.48□□□□□ -0.57
APOC1-204ENST00000589078 SH3D19Q5HYK7 790 aa11.48□□□□□ -0.57
APOC1-204ENST00000589078 PPP4R3BQ5MIZ7 849 aa11.48□□□□□ -0.57
APOC1-204ENST00000589078 VPS53Q5VIR6 699 aa11.48□□□□□ -0.57
APOC1-204ENST00000589078 DEFB123Q8N688 67 aa11.48□□□□□ -0.57
APOC1-204ENST00000589078 KANSL2Q9H9L4 492 aa11.48□□□□□ -0.57
APOC1-204ENST00000589078 ARHGEF10LQ9HCE6 1279 aa11.48□□□□□ -0.57
APOC1-204ENST00000589078 ZMYM6O95789 1325 aa11.48□□□□□ -0.57
APOC1-204ENST00000589078 FOCADQ5VW36 1801 aa11.48□□□□□ -0.57
APOC1-204ENST00000589078 MYH7P12883 1935 aa11.47□□□□□ -0.57
APOC1-204ENST00000589078 NAV1Q8NEY1 1877 aa11.47□□□□□ -0.57
APOC1-204ENST00000589078 FGAP02671 866 aa11.47□□□□□ -0.57
APOC1-204ENST00000589078 TFRCP02786 760 aaKnown RBP11.47□□□□□ -0.57
APOC1-204ENST00000589078 CYP2C8P10632 490 aa11.47□□□□□ -0.57
APOC1-204ENST00000589078 BCRP11274 1271 aa11.47□□□□□ -0.57
APOC1-204ENST00000589078 PCP11498 1178 aaKnown RBP11.47□□□□□ -0.57
APOC1-204ENST00000589078 CHMLP26374 656 aa11.47□□□□□ -0.57
APOC1-204ENST00000589078 JAG1P78504 1218 aa11.47□□□□□ -0.57
APOC1-204ENST00000589078 EVX2Q03828 476 aa11.47□□□□□ -0.57
APOC1-204ENST00000589078 SHROOM1Q2M3G4 852 aaPredicted RBP11.47□□□□□ -0.57
APOC1-204ENST00000589078 Q7L0L9 218 aa11.47□□□□□ -0.57
APOC1-204ENST00000589078 STK11IPQ8N1F8 1099 aa11.47□□□□□ -0.57
APOC1-204ENST00000589078 SMCR8Q8TEV9 937 aaPredicted RBP11.47□□□□□ -0.57
APOC1-204ENST00000589078 DEFB118Q96PH6 123 aa11.47□□□□□ -0.57
APOC1-204ENST00000589078 DSCC1Q9BVC3 393 aa11.47□□□□□ -0.57
APOC1-204ENST00000589078 KIAA1683Q9H0B3 1180 aa11.47□□□□□ -0.57
APOC1-204ENST00000589078 RNF41Q9H4P4 317 aaPredicted RBP11.47□□□□□ -0.57
APOC1-204ENST00000589078 ANAPC4Q9UJX5 808 aa11.47□□□□□ -0.57
APOC1-204ENST00000589078 DNAH12Q6ZR08 3092 aa11.47□□□□□ -0.57
APOC1-204ENST00000589078 PTPRFP10586 1907 aa11.47□□□□□ -0.57
APOC1-204ENST00000589078 DDX60LQ5H9U9 1706 aaKnown RBP11.46□□□□□ -0.57
APOC1-204ENST00000589078 PRUNE2Q8WUY3 3088 aa11.46□□□□□ -0.57
APOC1-204ENST00000589078 ADCY3O60266 1144 aa11.46□□□□□ -0.57
APOC1-204ENST00000589078 TSPY3P0CV98 308 aa11.46□□□□□ -0.57
APOC1-204ENST00000589078 TSPY8P0CW00 308 aa11.46□□□□□ -0.57
APOC1-204ENST00000589078 RASA1P20936 1047 aa11.46□□□□□ -0.57
APOC1-204ENST00000589078 NT5C2P49902 561 aa11.46□□□□□ -0.57
APOC1-204ENST00000589078 IRX3P78415 501 aaPredicted RBP11.46□□□□□ -0.57
APOC1-204ENST00000589078 ATP2B2Q01814 1243 aa11.46□□□□□ -0.57
APOC1-204ENST00000589078 GPAT2Q6NUI2 795 aa11.46□□□□□ -0.57
APOC1-204ENST00000589078 KIAA1211Q6ZU35 1233 aa11.46□□□□□ -0.57
APOC1-204ENST00000589078 GDF15Q99988 308 aa11.46□□□□□ -0.57
APOC1-204ENST00000589078 MYH1P12882 1939 aa11.45□□□□□ -0.58
APOC1-204ENST00000589078 DOCK1Q14185 1865 aa11.45□□□□□ -0.58
APOC1-204ENST00000589078 ZNF213O14771 459 aa11.45□□□□□ -0.58
APOC1-204ENST00000589078 FOXP2O15409 715 aa11.45□□□□□ -0.58
APOC1-204ENST00000589078 PRDM1O75626 825 aa11.45□□□□□ -0.58
APOC1-204ENST00000589078 GUCY1A2P33402 732 aa11.45□□□□□ -0.58
APOC1-204ENST00000589078 FLT3LGP49771 235 aa11.45□□□□□ -0.58
APOC1-204ENST00000589078 ZYXQ15942 572 aaKnown RBP11.45□□□□□ -0.58
APOC1-204ENST00000589078 IMMTQ16891 758 aaKnown RBP11.45□□□□□ -0.58
APOC1-204ENST00000589078 TREML2Q5T2D2 321 aa11.45□□□□□ -0.58
APOC1-204ENST00000589078 GPR153Q6NV75 609 aa11.45□□□□□ -0.58
APOC1-204ENST00000589078 C7orf61Q8IZ16 206 aa11.45□□□□□ -0.58
APOC1-204ENST00000589078 ACER1Q8TDN7 264 aa11.45□□□□□ -0.58
APOC1-204ENST00000589078 DIS3LQ8TF46 1054 aaKnown RBP11.45□□□□□ -0.58
APOC1-204ENST00000589078 GTF3C2Q8WUA4 911 aaPredicted RBP11.45□□□□□ -0.58
APOC1-204ENST00000589078 LPAR1Q92633 364 aa11.45□□□□□ -0.58
APOC1-204ENST00000589078 PAWRQ96IZ0 340 aaKnown RBP11.45□□□□□ -0.58
APOC1-204ENST00000589078 C12orf42Q96LP6 360 aa11.45□□□□□ -0.58
APOC1-204ENST00000589078 GOPCQ9HD26 462 aa11.45□□□□□ -0.58
APOC1-204ENST00000589078 PAK6Q9NQU5 681 aaPredicted RBP11.45□□□□□ -0.58
APOC1-204ENST00000589078 TOMM22Q9NS69 142 aa11.45□□□□□ -0.58
APOC1-204ENST00000589078 ZMYND8Q9ULU4 1186 aaPredicted RBP11.45□□□□□ -0.58
APOC1-204ENST00000589078 STXBP5LQ9Y2K9 1186 aa11.45□□□□□ -0.58
APOC1-204ENST00000589078 TSPY2A6NKD2 308 aa11.44□□□□□ -0.58
APOC1-204ENST00000589078 USP17L15C9J2P7 530 aa11.44□□□□□ -0.58
APOC1-204ENST00000589078 USP17L13C9JLJ4 530 aa11.44□□□□□ -0.58
APOC1-204ENST00000589078 USP17L11C9JVI0 530 aa11.44□□□□□ -0.58
APOC1-204ENST00000589078 USP17L18D6R9N7 530 aa11.44□□□□□ -0.58
APOC1-204ENST00000589078 USP17L22D6RA61 530 aa11.44□□□□□ -0.58
APOC1-204ENST00000589078 USP17L17D6RBQ6 530 aa11.44□□□□□ -0.58
APOC1-204ENST00000589078 USP17L19D6RCP7 530 aa11.44□□□□□ -0.58
APOC1-204ENST00000589078 USP17L20D6RJB6 530 aa11.44□□□□□ -0.58
APOC1-204ENST00000589078 SMIM22K7EJ46 135 aa11.44□□□□□ -0.58
APOC1-204ENST00000589078 SGSM2O43147 1006 aa11.44□□□□□ -0.58
APOC1-204ENST00000589078 ORC4O43929 436 aa11.44□□□□□ -0.58
APOC1-204ENST00000589078 RANBP6O60518 1105 aaKnown RBP11.44□□□□□ -0.58
APOC1-204ENST00000589078 HOXA7P31268 230 aaPredicted RBP11.44□□□□□ -0.58
APOC1-204ENST00000589078 BMP8BP34820 402 aa11.44□□□□□ -0.58
APOC1-204ENST00000589078 GCLCP48506 637 aaPredicted RBP11.44□□□□□ -0.58
APOC1-204ENST00000589078 TFAP4Q01664 338 aa11.44□□□□□ -0.58
APOC1-204ENST00000589078 CTDSPL2Q05D32 466 aa11.44□□□□□ -0.58
APOC1-204ENST00000589078 USP17L24Q0WX57 530 aa11.44□□□□□ -0.58
APOC1-204ENST00000589078 MFSD6Q6ZSS7 791 aa11.44□□□□□ -0.58
APOC1-204ENST00000589078 PXYLP1Q8TE99 480 aa11.44□□□□□ -0.58
APOC1-204ENST00000589078 CRISPLD2Q9H0B8 497 aa11.44□□□□□ -0.58
APOC1-204ENST00000589078 EMILIN3Q9NT22 766 aa11.44□□□□□ -0.58
APOC1-204ENST00000589078 CDK5RAP2Q96SN8 1893 aa11.44□□□□□ -0.58
APOC1-204ENST00000589078 SIPA1L1O43166 1804 aa11.44□□□□□ -0.58
APOC1-204ENST00000589078 PHIPQ8WWQ0 1821 aa11.44□□□□□ -0.58
APOC1-204ENST00000589078 TNPO2O14787 897 aaKnown RBP11.43□□□□□ -0.58
APOC1-204ENST00000589078 CDC45O75419 566 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms