RNA–Protein interactions for RNA: ENST00000588957.5

GFAP-215, Transcript of glial fibrillary acidic protein, humanhuman

TSL 3

Gene GFAP, Length 578 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-215ENST00000588957 CCDC196A0A1B0GTZ2 297 aa16.79■□□□□ 0.28
GFAP-215ENST00000588957 TRIM75PA6NK02 468 aa16.79■□□□□ 0.28
GFAP-215ENST00000588957 SH2B2O14492 632 aaPredicted RBP16.79■□□□□ 0.28
GFAP-215ENST00000588957 IRF6O14896 467 aa16.79■□□□□ 0.28
GFAP-215ENST00000588957 KIF5BP33176 963 aa16.79■□□□□ 0.28
GFAP-215ENST00000588957 SREBF2Q12772 1141 aa16.79■□□□□ 0.28
GFAP-215ENST00000588957 SEC23AQ15436 765 aa16.79■□□□□ 0.28
GFAP-215ENST00000588957 Q6ZUG5 572 aa16.79■□□□□ 0.28
GFAP-215ENST00000588957 CHST3Q7LGC8 479 aa16.79■□□□□ 0.28
GFAP-215ENST00000588957 PROCA1Q8NCQ7 364 aaPredicted RBP16.79■□□□□ 0.28
GFAP-215ENST00000588957 PNMA1Q8ND90 353 aa16.79■□□□□ 0.28
GFAP-215ENST00000588957 C12orf42Q96LP6 360 aa16.79■□□□□ 0.28
GFAP-215ENST00000588957 TMEM47Q9BQJ4 181 aa16.79■□□□□ 0.28
GFAP-215ENST00000588957 AGXT2Q9BYV1 514 aa16.79■□□□□ 0.28
GFAP-215ENST00000588957 UPF3BQ9BZI7 483 aaKnown RBP16.79■□□□□ 0.28
GFAP-215ENST00000588957 VCPKMTQ9H867 229 aa16.79■□□□□ 0.28
GFAP-215ENST00000588957 SIPA1L1O43166 1804 aa16.78■□□□□ 0.28
GFAP-215ENST00000588957 F5H6K3 240 aa16.78■□□□□ 0.28
GFAP-215ENST00000588957 DDAH1O94760 285 aa16.78■□□□□ 0.28
GFAP-215ENST00000588957 SLC10A3P09131 477 aa16.78■□□□□ 0.28
GFAP-215ENST00000588957 GNAQP50148 359 aa16.78■□□□□ 0.28
GFAP-215ENST00000588957 ANTXR2P58335 489 aa16.78■□□□□ 0.28
GFAP-215ENST00000588957 JAG1P78504 1218 aa16.78■□□□□ 0.28
GFAP-215ENST00000588957 KLRC3Q07444 240 aa16.78■□□□□ 0.28
GFAP-215ENST00000588957 GPATCH4Q5T3I0 446 aaKnown RBP16.78■□□□□ 0.28
GFAP-215ENST00000588957 GMCL1Q96IK5 515 aa16.78■□□□□ 0.28
GFAP-215ENST00000588957 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.78■□□□□ 0.28
GFAP-215ENST00000588957 A0A0G2JLL6 359 aaPredicted RBP16.77■□□□□ 0.28
GFAP-215ENST00000588957 WDR46O15213 610 aaKnown RBP16.77■□□□□ 0.28
GFAP-215ENST00000588957 DHX16O60231 1041 aaKnown RBP16.77■□□□□ 0.28
GFAP-215ENST00000588957 NMT2O60551 498 aa16.77■□□□□ 0.28
GFAP-215ENST00000588957 MAP2K2P36507 400 aa16.77■□□□□ 0.28
GFAP-215ENST00000588957 EVCP57679 992 aa16.77■□□□□ 0.28
GFAP-215ENST00000588957 MTMR2Q13614 643 aa16.77■□□□□ 0.28
GFAP-215ENST00000588957 PRRT2Q7Z6L0 340 aaPredicted RBP16.77■□□□□ 0.28
GFAP-215ENST00000588957 RASAL3Q86YV0 1011 aa16.77■□□□□ 0.28
GFAP-215ENST00000588957 SIAH1Q8IUQ4 282 aa16.77■□□□□ 0.28
GFAP-215ENST00000588957 DCAF4Q8WV16 495 aa16.77■□□□□ 0.28
GFAP-215ENST00000588957 ZNF274Q96GC6 653 aaPredicted RBP16.77■□□□□ 0.28
GFAP-215ENST00000588957 LZTS2Q9BRK4 669 aa16.77■□□□□ 0.28
GFAP-215ENST00000588957 LY9Q9HBG7 655 aa16.77■□□□□ 0.28
GFAP-215ENST00000588957 ZCCHC17Q9NP64 241 aaKnown RBP16.77■□□□□ 0.28
GFAP-215ENST00000588957 RAD21O60216 631 aa16.76■□□□□ 0.27
GFAP-215ENST00000588957 SLC1A4P43007 532 aa16.76■□□□□ 0.27
GFAP-215ENST00000588957 SLFN13Q68D06 897 aa16.76■□□□□ 0.27
GFAP-215ENST00000588957 CPLX2Q6PUV4 134 aaKnown RBP16.76■□□□□ 0.27
GFAP-215ENST00000588957 CTCFLQ8NI51 663 aaPredicted RBP16.76■□□□□ 0.27
GFAP-215ENST00000588957 ACER1Q8TDN7 264 aa16.76■□□□□ 0.27
GFAP-215ENST00000588957 CHURC1Q8WUH1 139 aa16.76■□□□□ 0.27
GFAP-215ENST00000588957 BRF1Q92994 677 aa16.76■□□□□ 0.27
GFAP-215ENST00000588957 ZSCAN31Q96LW9 406 aaPredicted RBP16.76■□□□□ 0.27
GFAP-215ENST00000588957 KIF2CQ99661 725 aa16.76■□□□□ 0.27
GFAP-215ENST00000588957 PNMA3Q9UL41 463 aa16.76■□□□□ 0.27
GFAP-215ENST00000588957 SLC45A1Q9Y2W3 748 aa16.76■□□□□ 0.27
GFAP-215ENST00000588957 MYH8P13535 1937 aa16.75■□□□□ 0.27
GFAP-215ENST00000588957 A0A1W2PRG0 241 aa16.75■□□□□ 0.27
GFAP-215ENST00000588957 TESPA1A2RU30 521 aaPredicted RBP16.75■□□□□ 0.27
GFAP-215ENST00000588957 ZBTB43O43298 467 aa16.75■□□□□ 0.27
GFAP-215ENST00000588957 PLA2G6O60733 806 aa16.75■□□□□ 0.27
GFAP-215ENST00000588957 ALDH1A1P00352 501 aa16.75■□□□□ 0.27
GFAP-215ENST00000588957 PARP1P09874 1014 aaKnown RBP16.75■□□□□ 0.27
GFAP-215ENST00000588957 FDX1P10109 184 aa16.75■□□□□ 0.27
GFAP-215ENST00000588957 ASPRV1Q53RT3 343 aa16.75■□□□□ 0.27
GFAP-215ENST00000588957 ZNF654Q8IZM8 581 aa16.75■□□□□ 0.27
GFAP-215ENST00000588957 CAPNS2Q96L46 248 aa16.75■□□□□ 0.27
GFAP-215ENST00000588957 RBM28Q9NW13 759 aaKnown RBP16.75■□□□□ 0.27
GFAP-215ENST00000588957 HOXC10Q9NYD6 342 aa16.75■□□□□ 0.27
GFAP-215ENST00000588957 PNMA2Q9UL42 364 aa16.75■□□□□ 0.27
GFAP-215ENST00000588957 CCL15-CCL14A0A0B4J2E2 113 aa16.74■□□□□ 0.27
GFAP-215ENST00000588957 USP17L15C9J2P7 530 aa16.74■□□□□ 0.27
GFAP-215ENST00000588957 USP17L13C9JLJ4 530 aa16.74■□□□□ 0.27
GFAP-215ENST00000588957 USP17L11C9JVI0 530 aa16.74■□□□□ 0.27
GFAP-215ENST00000588957 USP17L18D6R9N7 530 aa16.74■□□□□ 0.27
GFAP-215ENST00000588957 USP17L22D6RA61 530 aa16.74■□□□□ 0.27
GFAP-215ENST00000588957 USP17L17D6RBQ6 530 aa16.74■□□□□ 0.27
GFAP-215ENST00000588957 USP17L19D6RCP7 530 aa16.74■□□□□ 0.27
GFAP-215ENST00000588957 USP17L20D6RJB6 530 aa16.74■□□□□ 0.27
GFAP-215ENST00000588957 BMP3P12645 472 aa16.74■□□□□ 0.27
GFAP-215ENST00000588957 OSBPP22059 807 aa16.74■□□□□ 0.27
GFAP-215ENST00000588957 SMARCA1P28370 1054 aa16.74■□□□□ 0.27
GFAP-215ENST00000588957 HOXA7P31268 230 aaPredicted RBP16.74■□□□□ 0.27
GFAP-215ENST00000588957 HMGCS2P54868 508 aa16.74■□□□□ 0.27
GFAP-215ENST00000588957 USP17L24Q0WX57 530 aa16.74■□□□□ 0.27
GFAP-215ENST00000588957 CCL15Q16663 113 aa16.74■□□□□ 0.27
GFAP-215ENST00000588957 SHROOM1Q2M3G4 852 aaPredicted RBP16.74■□□□□ 0.27
GFAP-215ENST00000588957 FAM160B2Q86V87 743 aa16.74■□□□□ 0.27
GFAP-215ENST00000588957 LRRC47Q8N1G4 583 aaKnown RBP16.74■□□□□ 0.27
GFAP-215ENST00000588957 GTF3C2Q8WUA4 911 aaPredicted RBP16.74■□□□□ 0.27
GFAP-215ENST00000588957 LRRC2Q9BYS8 371 aa16.74■□□□□ 0.27
GFAP-215ENST00000588957 SH2B1Q9NRF2 756 aaPredicted RBP16.74■□□□□ 0.27
GFAP-215ENST00000588957 LIMCH1Q9UPQ0 1083 aa16.74■□□□□ 0.27
GFAP-215ENST00000588957 AGTPBP1Q9UPW5 1226 aa16.74■□□□□ 0.27
GFAP-215ENST00000588957 DOCK1Q14185 1865 aa16.73■□□□□ 0.27
GFAP-215ENST00000588957 KLF18A0A0U1RQI7 1052 aa16.73■□□□□ 0.27
GFAP-215ENST00000588957 NDUFB10O96000 172 aa16.73■□□□□ 0.27
GFAP-215ENST00000588957 SNHG28P0DPA3 235 aa16.73■□□□□ 0.27
GFAP-215ENST00000588957 PDHBP11177 359 aa16.73■□□□□ 0.27
GFAP-215ENST00000588957 CPA1P15085 419 aa16.73■□□□□ 0.27
GFAP-215ENST00000588957 TROAPQ12815 778 aa16.73■□□□□ 0.27
GFAP-215ENST00000588957 TRAF1Q13077 416 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms