RNA–Protein interactions for RNA: ENST00000588935.1

CNN1-208, Transcript of calponin 1, humanhuman

TSL 5

Gene CNN1, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-208ENST00000588935 FAM43AQ8N2R8 423 aa17.16■□□□□ 0.34
CNN1-208ENST00000588935 TMEM47Q9BQJ4 181 aa17.16■□□□□ 0.34
CNN1-208ENST00000588935 SH2D4AQ9H788 454 aa17.16■□□□□ 0.34
CNN1-208ENST00000588935 SENP2Q9HC62 589 aa17.16■□□□□ 0.34
CNN1-208ENST00000588935 F5H6K3 240 aa17.15■□□□□ 0.34
CNN1-208ENST00000588935 TOP1P11387 765 aaKnown RBP17.15■□□□□ 0.34
CNN1-208ENST00000588935 TM4SF4P48230 202 aa17.15■□□□□ 0.34
CNN1-208ENST00000588935 USP14P54578 494 aa17.15■□□□□ 0.34
CNN1-208ENST00000588935 INHBEP58166 350 aa17.15■□□□□ 0.34
CNN1-208ENST00000588935 KLRC3Q07444 240 aa17.15■□□□□ 0.34
CNN1-208ENST00000588935 MOGSQ13724 837 aa17.15■□□□□ 0.34
CNN1-208ENST00000588935 CCDC178Q5BJE1 867 aa17.15■□□□□ 0.34
CNN1-208ENST00000588935 SH3D19Q5HYK7 790 aa17.15■□□□□ 0.34
CNN1-208ENST00000588935 RCSD1Q6JBY9 416 aa17.15■□□□□ 0.34
CNN1-208ENST00000588935 GPAT2Q6NUI2 795 aa17.15■□□□□ 0.34
CNN1-208ENST00000588935 BLOC1S2Q6QNY1 142 aa17.15■□□□□ 0.34
CNN1-208ENST00000588935 DHX32Q7L7V1 743 aaKnown RBP17.15■□□□□ 0.34
CNN1-208ENST00000588935 IFNL1Q8IU54 200 aa17.15■□□□□ 0.34
CNN1-208ENST00000588935 ENAHQ8N8S7 591 aaPredicted RBP17.15■□□□□ 0.34
CNN1-208ENST00000588935 NUP88Q99567 741 aaPredicted RBP17.15■□□□□ 0.34
CNN1-208ENST00000588935 C22orf23Q9BZE7 217 aa17.15■□□□□ 0.34
CNN1-208ENST00000588935 VCPKMTQ9H867 229 aa17.15■□□□□ 0.34
CNN1-208ENST00000588935 UPF2Q9HAU5 1272 aaKnown RBP17.15■□□□□ 0.34
CNN1-208ENST00000588935 GOPCQ9HD26 462 aa17.15■□□□□ 0.34
CNN1-208ENST00000588935 TESPA1A2RU30 521 aaPredicted RBP17.14■□□□□ 0.33
CNN1-208ENST00000588935 PDHXO00330 501 aa17.14■□□□□ 0.33
CNN1-208ENST00000588935 PSMA5P28066 241 aa17.14■□□□□ 0.33
CNN1-208ENST00000588935 FGD1P98174 961 aa17.14■□□□□ 0.33
CNN1-208ENST00000588935 WTAPQ15007 396 aa17.14■□□□□ 0.33
CNN1-208ENST00000588935 SART3Q15020 963 aaKnown RBP17.14■□□□□ 0.33
CNN1-208ENST00000588935 PPP4R3BQ5MIZ7 849 aa17.14■□□□□ 0.33
CNN1-208ENST00000588935 IFIT1BQ5T764 474 aaKnown RBP17.14■□□□□ 0.33
CNN1-208ENST00000588935 SLFN13Q68D06 897 aa17.14■□□□□ 0.33
CNN1-208ENST00000588935 OTUD7BQ6GQQ9 843 aa17.14■□□□□ 0.33
CNN1-208ENST00000588935 RASGRP2Q7LDG7 609 aa17.14■□□□□ 0.33
CNN1-208ENST00000588935 MKL1Q969V6 931 aa17.14■□□□□ 0.33
CNN1-208ENST00000588935 TTC14Q96N46 770 aa17.14■□□□□ 0.33
CNN1-208ENST00000588935 UPF3BQ9BZI7 483 aaKnown RBP17.14■□□□□ 0.33
CNN1-208ENST00000588935 KAT14Q9H8E8 782 aa17.14■□□□□ 0.33
CNN1-208ENST00000588935 TRPA1O75762 1119 aa17.13■□□□□ 0.33
CNN1-208ENST00000588935 NDUFB10O96000 172 aa17.13■□□□□ 0.33
CNN1-208ENST00000588935 EXOSC10Q01780 885 aaKnown RBP17.13■□□□□ 0.33
CNN1-208ENST00000588935 SEC23AQ15436 765 aa17.13■□□□□ 0.33
CNN1-208ENST00000588935 FAM83BQ5T0W9 1011 aa17.13■□□□□ 0.33
CNN1-208ENST00000588935 NFXL1Q6ZNB6 911 aa17.13■□□□□ 0.33
CNN1-208ENST00000588935 DGKHQ86XP1 1220 aa17.13■□□□□ 0.33
CNN1-208ENST00000588935 RAB11FIP4Q86YS3 637 aa17.13■□□□□ 0.33
CNN1-208ENST00000588935 PROCA1Q8NCQ7 364 aaPredicted RBP17.13■□□□□ 0.33
CNN1-208ENST00000588935 IGDCC4Q8TDY8 1250 aa17.13■□□□□ 0.33
CNN1-208ENST00000588935 TANGO6Q9C0B7 1094 aa17.13■□□□□ 0.33
CNN1-208ENST00000588935 RPAP3Q9H6T3 665 aaPredicted RBP17.13■□□□□ 0.33
CNN1-208ENST00000588935 TBC1D8O95759 1140 aa17.12■□□□□ 0.33
CNN1-208ENST00000588935 CYP2C8P10632 490 aa17.12■□□□□ 0.33
CNN1-208ENST00000588935 VCAM1P19320 739 aa17.12■□□□□ 0.33
CNN1-208ENST00000588935 TAF1CQ15572 869 aaPredicted RBP17.12■□□□□ 0.33
CNN1-208ENST00000588935 Q6ZUG5 572 aa17.12■□□□□ 0.33
CNN1-208ENST00000588935 ANKRD23Q86SG2 305 aa17.12■□□□□ 0.33
CNN1-208ENST00000588935 BEGAINQ9BUH8 593 aa17.12■□□□□ 0.33
CNN1-208ENST00000588935 RNF186Q9NXI6 227 aa17.12■□□□□ 0.33
CNN1-208ENST00000588935 TSKSQ9UJT2 592 aa17.12■□□□□ 0.33
CNN1-208ENST00000588935 NAP1L2Q9ULW6 460 aaPredicted RBP17.12■□□□□ 0.33
CNN1-208ENST00000588935 AGTPBP1Q9UPW5 1226 aa17.12■□□□□ 0.33
CNN1-208ENST00000588935 CYP46A1Q9Y6A2 500 aa17.12■□□□□ 0.33
CNN1-208ENST00000588935 SH2B2O14492 632 aaPredicted RBP17.11■□□□□ 0.33
CNN1-208ENST00000588935 HMGB1P09429 215 aaKnown RBP17.11■□□□□ 0.33
CNN1-208ENST00000588935 OSBPP22059 807 aa17.11■□□□□ 0.33
CNN1-208ENST00000588935 RPS6KB1P23443 525 aa17.11■□□□□ 0.33
CNN1-208ENST00000588935 NT5C2P49902 561 aa17.11■□□□□ 0.33
CNN1-208ENST00000588935 CCDC96Q2M329 555 aa17.11■□□□□ 0.33
CNN1-208ENST00000588935 RUFY3Q7L099 469 aa17.11■□□□□ 0.33
CNN1-208ENST00000588935 REM2Q8IYK8 340 aaPredicted RBP17.11■□□□□ 0.33
CNN1-208ENST00000588935 PNMA1Q8ND90 353 aa17.11■□□□□ 0.33
CNN1-208ENST00000588935 ANKS1AQ92625 1134 aa17.11■□□□□ 0.33
CNN1-208ENST00000588935 TMEM87BQ96K49 555 aa17.11■□□□□ 0.33
CNN1-208ENST00000588935 LARP6Q9BRS8 491 aaKnown RBP17.11■□□□□ 0.33
CNN1-208ENST00000588935 ZSWIM6Q9HCJ5 1215 aa17.11■□□□□ 0.33
CNN1-208ENST00000588935 GPCPD1Q9NPB8 672 aa17.11■□□□□ 0.33
CNN1-208ENST00000588935 FRMPD2Q68DX3 1309 aaPredicted RBP17.11■□□□□ 0.33
CNN1-208ENST00000588935 CCDC69A6NI79 296 aa17.1■□□□□ 0.33
CNN1-208ENST00000588935 USP17L15C9J2P7 530 aa17.1■□□□□ 0.33
CNN1-208ENST00000588935 USP17L13C9JLJ4 530 aa17.1■□□□□ 0.33
CNN1-208ENST00000588935 USP17L11C9JVI0 530 aa17.1■□□□□ 0.33
CNN1-208ENST00000588935 USP17L18D6R9N7 530 aa17.1■□□□□ 0.33
CNN1-208ENST00000588935 USP17L22D6RA61 530 aa17.1■□□□□ 0.33
CNN1-208ENST00000588935 USP17L17D6RBQ6 530 aa17.1■□□□□ 0.33
CNN1-208ENST00000588935 USP17L19D6RCP7 530 aa17.1■□□□□ 0.33
CNN1-208ENST00000588935 USP17L20D6RJB6 530 aa17.1■□□□□ 0.33
CNN1-208ENST00000588935 ECM2O94769 699 aaPredicted RBP17.1■□□□□ 0.33
CNN1-208ENST00000588935 SLC1A4P43007 532 aa17.1■□□□□ 0.33
CNN1-208ENST00000588935 NOVP48745 357 aa17.1■□□□□ 0.33
CNN1-208ENST00000588935 ANAPC15P60006 121 aa17.1■□□□□ 0.33
CNN1-208ENST00000588935 IRX3P78415 501 aaPredicted RBP17.1■□□□□ 0.33
CNN1-208ENST00000588935 MAP2K1Q02750 393 aaPredicted RBP17.1■□□□□ 0.33
CNN1-208ENST00000588935 USP17L24Q0WX57 530 aa17.1■□□□□ 0.33
CNN1-208ENST00000588935 KCTD1Q719H9 257 aa17.1■□□□□ 0.33
CNN1-208ENST00000588935 GMCL1P1Q8NEA9 526 aa17.1■□□□□ 0.33
CNN1-208ENST00000588935 NUP133Q8WUM0 1156 aa17.1■□□□□ 0.33
CNN1-208ENST00000588935 LPAR1Q92633 364 aa17.1■□□□□ 0.33
CNN1-208ENST00000588935 C12orf42Q96LP6 360 aa17.1■□□□□ 0.33
CNN1-208ENST00000588935 P2RX7Q99572 595 aaKnown RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms