RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 ANAPC15P60006 121 aa23.03■■□□□ 1.28
CIRBP-220ENST00000588917 MTMR2Q13614 643 aa23.03■■□□□ 1.28
CIRBP-220ENST00000588917 STOX1Q6ZVD7 989 aa23.03■■□□□ 1.28
CIRBP-220ENST00000588917 RASEFQ8IZ41 740 aa23.03■■□□□ 1.28
CIRBP-220ENST00000588917 ACER1Q8TDN7 264 aa23.03■■□□□ 1.28
CIRBP-220ENST00000588917 GOPCQ9HD26 462 aa23.03■■□□□ 1.28
CIRBP-220ENST00000588917 SNX14Q9Y5W7 946 aa23.03■■□□□ 1.28
CIRBP-220ENST00000588917 TAF6LQ9Y6J9 622 aa23.03■■□□□ 1.28
CIRBP-220ENST00000588917 MYH8P13535 1937 aa23.03■■□□□ 1.28
CIRBP-220ENST00000588917 ALDH1A1P00352 501 aa23.02■■□□□ 1.28
CIRBP-220ENST00000588917 PABPC4Q13310 644 aaKnown RBP eCLIP23.02■■□□□ 1.285e-9■□□□□ 9.2
CIRBP-220ENST00000588917 LPAR1Q92633 364 aa23.02■■□□□ 1.28
CIRBP-220ENST00000588917 ZCCHC17Q9NP64 241 aaKnown RBP23.02■■□□□ 1.28
CIRBP-220ENST00000588917 ATAD5Q96QE3 1844 aa23.01■■□□□ 1.27
CIRBP-220ENST00000588917 A0A1W2PRG0 241 aa23.01■■□□□ 1.27
CIRBP-220ENST00000588917 TOP1P11387 765 aaKnown RBP23.01■■□□□ 1.27
CIRBP-220ENST00000588917 HMGCS2P54868 508 aa23.01■■□□□ 1.27
CIRBP-220ENST00000588917 GADL1Q6ZQY3 521 aa23.01■■□□□ 1.27
CIRBP-220ENST00000588917 MB21D2Q8IYB1 491 aaPredicted RBP23.01■■□□□ 1.27
CIRBP-220ENST00000588917 TMTC2Q8N394 836 aa23.01■■□□□ 1.27
CIRBP-220ENST00000588917 ANKS1AQ92625 1134 aa23.01■■□□□ 1.27
CIRBP-220ENST00000588917 C12orf42Q96LP6 360 aa23.01■■□□□ 1.27
CIRBP-220ENST00000588917 VCPKMTQ9H867 229 aa23.01■■□□□ 1.27
CIRBP-220ENST00000588917 IFIT3O14879 490 aaKnown RBP23■■□□□ 1.27
CIRBP-220ENST00000588917 NMT2O60551 498 aa23■■□□□ 1.27
CIRBP-220ENST00000588917 DHX32Q7L7V1 743 aaKnown RBP23■■□□□ 1.27
CIRBP-220ENST00000588917 ANKRD23Q86SG2 305 aa23■■□□□ 1.27
CIRBP-220ENST00000588917 BRI3BPQ8WY22 251 aa23■■□□□ 1.27
CIRBP-220ENST00000588917 TMEM87BQ96K49 555 aa23■■□□□ 1.27
CIRBP-220ENST00000588917 ZKSCAN3Q9BRR0 538 aa23■■□□□ 1.27
CIRBP-220ENST00000588917 TM6SF1Q9BZW5 370 aa23■■□□□ 1.27
CIRBP-220ENST00000588917 EMILIN3Q9NT22 766 aa23■■□□□ 1.27
CIRBP-220ENST00000588917 SLC45A1Q9Y2W3 748 aa23■■□□□ 1.27
CIRBP-220ENST00000588917 WDR19Q8NEZ3 1342 aa23■■□□□ 1.27
CIRBP-220ENST00000588917 CYB5R4Q7L1T6 521 aa22.99■■□□□ 1.27
CIRBP-220ENST00000588917 CTU1Q7Z7A3 348 aaKnown RBP22.99■■□□□ 1.27
CIRBP-220ENST00000588917 IFNL1Q8IU54 200 aa22.99■■□□□ 1.27
CIRBP-220ENST00000588917 BACH2Q9BYV9 841 aa22.99■■□□□ 1.27
CIRBP-220ENST00000588917 AGTPBP1Q9UPW5 1226 aa22.99■■□□□ 1.27
CIRBP-220ENST00000588917 F5H6K3 240 aa22.98■■□□□ 1.27
CIRBP-220ENST00000588917 PRC1O43663 620 aa22.98■■□□□ 1.27
CIRBP-220ENST00000588917 KLRC3Q07444 240 aa22.98■■□□□ 1.27
CIRBP-220ENST00000588917 ZYXQ15942 572 aaKnown RBP22.98■■□□□ 1.27
CIRBP-220ENST00000588917 IFIT1BQ5T764 474 aaKnown RBP22.98■■□□□ 1.27
CIRBP-220ENST00000588917 BLOC1S2Q6QNY1 142 aa22.98■■□□□ 1.27
CIRBP-220ENST00000588917 CLEC10AQ8IUN9 316 aa22.98■■□□□ 1.27
CIRBP-220ENST00000588917 GMCL1P1Q8NEA9 526 aa22.98■■□□□ 1.27
CIRBP-220ENST00000588917 JAKMIP1Q96N16 626 aaKnown RBP22.98■■□□□ 1.27
CIRBP-220ENST00000588917 KAT14Q9H8E8 782 aa22.98■■□□□ 1.27
CIRBP-220ENST00000588917 TNKSO95271 1327 aa22.98■■□□□ 1.27
CIRBP-220ENST00000588917 MOGSQ13724 837 aa22.97■■□□□ 1.27
CIRBP-220ENST00000588917 WTAPQ15007 396 aa22.97■■□□□ 1.27
CIRBP-220ENST00000588917 ADCK5Q3MIX3 580 aa22.97■■□□□ 1.27
CIRBP-220ENST00000588917 RCSD1Q6JBY9 416 aa22.97■■□□□ 1.27
CIRBP-220ENST00000588917 ENAHQ8N8S7 591 aaPredicted RBP22.97■■□□□ 1.27
CIRBP-220ENST00000588917 PTPN18Q99952 460 aa22.97■■□□□ 1.27
CIRBP-220ENST00000588917 TMEM47Q9BQJ4 181 aa22.97■■□□□ 1.27
CIRBP-220ENST00000588917 PNMA3Q9UL41 463 aa22.97■■□□□ 1.27
CIRBP-220ENST00000588917 USP17L15C9J2P7 530 aa22.96■■□□□ 1.27
CIRBP-220ENST00000588917 BTBD19C9JJ37 291 aa22.96■■□□□ 1.27
CIRBP-220ENST00000588917 USP17L13C9JLJ4 530 aa22.96■■□□□ 1.27
CIRBP-220ENST00000588917 USP17L11C9JVI0 530 aa22.96■■□□□ 1.27
CIRBP-220ENST00000588917 USP17L18D6R9N7 530 aa22.96■■□□□ 1.27
CIRBP-220ENST00000588917 USP17L22D6RA61 530 aa22.96■■□□□ 1.27
CIRBP-220ENST00000588917 USP17L17D6RBQ6 530 aa22.96■■□□□ 1.27
CIRBP-220ENST00000588917 USP17L19D6RCP7 530 aa22.96■■□□□ 1.27
CIRBP-220ENST00000588917 USP17L20D6RJB6 530 aa22.96■■□□□ 1.27
CIRBP-220ENST00000588917 OSBPP22059 807 aa22.96■■□□□ 1.27
CIRBP-220ENST00000588917 HOXA7P31268 230 aaPredicted RBP22.96■■□□□ 1.27
CIRBP-220ENST00000588917 USP17L24Q0WX57 530 aa22.96■■□□□ 1.27
CIRBP-220ENST00000588917 TMEM67Q5HYA8 995 aa22.96■■□□□ 1.27
CIRBP-220ENST00000588917 NKX2-3Q8TAU0 364 aa22.96■■□□□ 1.27
CIRBP-220ENST00000588917 CYP46A1Q9Y6A2 500 aa22.96■■□□□ 1.27
CIRBP-220ENST00000588917 PHIPQ8WWQ0 1821 aa22.96■■□□□ 1.27
CIRBP-220ENST00000588917 GREB1LQ9C091 1923 aaPredicted RBP22.96■■□□□ 1.27
CIRBP-220ENST00000588917 PDHXO00330 501 aa22.95■■□□□ 1.26
CIRBP-220ENST00000588917 WDR46O15213 610 aaKnown RBP22.95■■□□□ 1.26
CIRBP-220ENST00000588917 RAD21O60216 631 aa22.95■■□□□ 1.26
CIRBP-220ENST00000588917 TBC1D8O95759 1140 aa22.95■■□□□ 1.26
CIRBP-220ENST00000588917 LIFRP42702 1097 aa22.95■■□□□ 1.26
CIRBP-220ENST00000588917 EXOSC10Q01780 885 aaKnown RBP22.95■■□□□ 1.26
CIRBP-220ENST00000588917 SEC23AQ15436 765 aa22.95■■□□□ 1.26
CIRBP-220ENST00000588917 GPAT2Q6NUI2 795 aa22.95■■□□□ 1.26
CIRBP-220ENST00000588917 CHST3Q7LGC8 479 aa22.95■■□□□ 1.26
CIRBP-220ENST00000588917 IGDCC4Q8TDY8 1250 aa22.95■■□□□ 1.26
CIRBP-220ENST00000588917 C22orf23Q9BZE7 217 aa22.95■■□□□ 1.26
CIRBP-220ENST00000588917 ZSWIM6Q9HCJ5 1215 aa22.95■■□□□ 1.26
CIRBP-220ENST00000588917 CASTP20810 708 aaKnown RBP22.94■■□□□ 1.26
CIRBP-220ENST00000588917 ANTXR2P58335 489 aa22.94■■□□□ 1.26
CIRBP-220ENST00000588917 FGD1P98174 961 aa22.94■■□□□ 1.26
CIRBP-220ENST00000588917 SLFN13Q68D06 897 aa22.94■■□□□ 1.26
CIRBP-220ENST00000588917 RUFY3Q7L099 469 aa22.94■■□□□ 1.26
CIRBP-220ENST00000588917 IL17RAQ96F46 866 aa22.94■■□□□ 1.26
CIRBP-220ENST00000588917 IGF2BP3O00425 579 aaKnown RBP eCLIP22.93■■□□□ 1.26
CIRBP-220ENST00000588917 VCAM1P19320 739 aa22.93■■□□□ 1.26
CIRBP-220ENST00000588917 RPS6KB1P23443 525 aa22.93■■□□□ 1.26
CIRBP-220ENST00000588917 PKN2Q16513 984 aaKnown RBP22.93■■□□□ 1.26
CIRBP-220ENST00000588917 CATSPERGQ6ZRH7 1159 aa22.93■■□□□ 1.26
CIRBP-220ENST00000588917 LRRC47Q8N1G4 583 aaKnown RBP22.93■■□□□ 1.26
CIRBP-220ENST00000588917 FAM43AQ8N2R8 423 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms