RNA–Protein interactions for RNA: ENST00000588812.5

CDK3-204, Transcript of cyclin dependent kinase 3, humanhuman

TSL 3

Gene CDK3, Length 570 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-204ENST00000588812 TOP1P11387 765 aaKnown RBP13.06□□□□□ -0.32
CDK3-204ENST00000588812 ZYXQ15942 572 aaKnown RBP13.06□□□□□ -0.32
CDK3-204ENST00000588812 IFFO2Q5TF58 517 aa13.06□□□□□ -0.32
CDK3-204ENST00000588812 RCSD1Q6JBY9 416 aa13.06□□□□□ -0.32
CDK3-204ENST00000588812 BLOC1S2Q6QNY1 142 aa13.06□□□□□ -0.32
CDK3-204ENST00000588812 GADL1Q6ZQY3 521 aa13.06□□□□□ -0.32
CDK3-204ENST00000588812 DHX32Q7L7V1 743 aaKnown RBP13.06□□□□□ -0.32
CDK3-204ENST00000588812 ENAHQ8N8S7 591 aaPredicted RBP13.06□□□□□ -0.32
CDK3-204ENST00000588812 LPAR1Q92633 364 aa13.06□□□□□ -0.32
CDK3-204ENST00000588812 TMEM87BQ96K49 555 aa13.06□□□□□ -0.32
CDK3-204ENST00000588812 C12orf42Q96LP6 360 aa13.06□□□□□ -0.32
CDK3-204ENST00000588812 TM6SF1Q9BZW5 370 aa13.06□□□□□ -0.32
CDK3-204ENST00000588812 VCPKMTQ9H867 229 aa13.06□□□□□ -0.32
CDK3-204ENST00000588812 ZCCHC17Q9NP64 241 aaKnown RBP13.06□□□□□ -0.32
CDK3-204ENST00000588812 EMILIN3Q9NT22 766 aa13.06□□□□□ -0.32
CDK3-204ENST00000588812 TNKSO95271 1327 aa13.06□□□□□ -0.32
CDK3-204ENST00000588812 WDR19Q8NEZ3 1342 aa13.06□□□□□ -0.32
CDK3-204ENST00000588812 F5H6K3 240 aa13.05□□□□□ -0.32
CDK3-204ENST00000588812 ALDH1A1P00352 501 aa13.05□□□□□ -0.32
CDK3-204ENST00000588812 ANTXR2P58335 489 aa13.05□□□□□ -0.32
CDK3-204ENST00000588812 EXOSC10Q01780 885 aaKnown RBP13.05□□□□□ -0.32
CDK3-204ENST00000588812 KLRC3Q07444 240 aa13.05□□□□□ -0.32
CDK3-204ENST00000588812 PABPC4Q13310 644 aaKnown RBP eCLIP13.05□□□□□ -0.32
CDK3-204ENST00000588812 MOGSQ13724 837 aa13.05□□□□□ -0.32
CDK3-204ENST00000588812 TMEM67Q5HYA8 995 aa13.05□□□□□ -0.32
CDK3-204ENST00000588812 IFIT1BQ5T764 474 aaKnown RBP13.05□□□□□ -0.32
CDK3-204ENST00000588812 CHST3Q7LGC8 479 aa13.05□□□□□ -0.32
CDK3-204ENST00000588812 ANKRD23Q86SG2 305 aa13.05□□□□□ -0.32
CDK3-204ENST00000588812 IFNL1Q8IU54 200 aa13.05□□□□□ -0.32
CDK3-204ENST00000588812 LRRC47Q8N1G4 583 aaKnown RBP13.05□□□□□ -0.32
CDK3-204ENST00000588812 TMTC2Q8N394 836 aa13.05□□□□□ -0.32
CDK3-204ENST00000588812 GMCL1P1Q8NEA9 526 aa13.05□□□□□ -0.32
CDK3-204ENST00000588812 IL17RAQ96F46 866 aa13.05□□□□□ -0.32
CDK3-204ENST00000588812 TMEM47Q9BQJ4 181 aa13.05□□□□□ -0.32
CDK3-204ENST00000588812 C22orf23Q9BZE7 217 aa13.05□□□□□ -0.32
CDK3-204ENST00000588812 KAT14Q9H8E8 782 aa13.05□□□□□ -0.32
CDK3-204ENST00000588812 AGTPBP1Q9UPW5 1226 aa13.05□□□□□ -0.32
CDK3-204ENST00000588812 BTBD19C9JJ37 291 aa13.04□□□□□ -0.32
CDK3-204ENST00000588812 RAD21O60216 631 aa13.04□□□□□ -0.32
CDK3-204ENST00000588812 VCAM1P19320 739 aa13.04□□□□□ -0.32
CDK3-204ENST00000588812 CASTP20810 708 aaKnown RBP13.04□□□□□ -0.32
CDK3-204ENST00000588812 MAP2K1Q02750 393 aaPredicted RBP13.04□□□□□ -0.32
CDK3-204ENST00000588812 WTAPQ15007 396 aa13.04□□□□□ -0.32
CDK3-204ENST00000588812 SEC23AQ15436 765 aa13.04□□□□□ -0.32
CDK3-204ENST00000588812 GPAT2Q6NUI2 795 aa13.04□□□□□ -0.32
CDK3-204ENST00000588812 IGDCC4Q8TDY8 1250 aa13.04□□□□□ -0.32
CDK3-204ENST00000588812 PTPN18Q99952 460 aa13.04□□□□□ -0.32
CDK3-204ENST00000588812 ZSWIM6Q9HCJ5 1215 aa13.04□□□□□ -0.32
CDK3-204ENST00000588812 SLC45A1Q9Y2W3 748 aa13.04□□□□□ -0.32
CDK3-204ENST00000588812 CYP46A1Q9Y6A2 500 aa13.04□□□□□ -0.32
CDK3-204ENST00000588812 THSD7BQ9C0I4 1608 aa13.03□□□□□ -0.32
CDK3-204ENST00000588812 PDHXO00330 501 aa13.03□□□□□ -0.32
CDK3-204ENST00000588812 IGF2BP3O00425 579 aaKnown RBP eCLIP13.03□□□□□ -0.32
CDK3-204ENST00000588812 WDR46O15213 610 aaKnown RBP13.03□□□□□ -0.32
CDK3-204ENST00000588812 RPS6KB1P23443 525 aa13.03□□□□□ -0.32
CDK3-204ENST00000588812 HOXA7P31268 230 aaPredicted RBP13.03□□□□□ -0.32
CDK3-204ENST00000588812 LIFRP42702 1097 aa13.03□□□□□ -0.32
CDK3-204ENST00000588812 RBM25P49756 843 aaKnown RBP13.03□□□□□ -0.32
CDK3-204ENST00000588812 DGKZQ13574 1117 aa13.03□□□□□ -0.32
CDK3-204ENST00000588812 RUFY3Q7L099 469 aa13.03□□□□□ -0.32
CDK3-204ENST00000588812 SPICE1Q8N0Z3 855 aa13.03□□□□□ -0.32
CDK3-204ENST00000588812 FAM43AQ8N2R8 423 aa13.03□□□□□ -0.32
CDK3-204ENST00000588812 PNMA1Q8ND90 353 aa13.03□□□□□ -0.32
CDK3-204ENST00000588812 GMCL1Q96IK5 515 aa13.03□□□□□ -0.32
CDK3-204ENST00000588812 PTPRFP10586 1907 aa13.03□□□□□ -0.32
CDK3-204ENST00000588812 MYH4Q9Y623 1939 aa13.02□□□□□ -0.32
CDK3-204ENST00000588812 USP17L15C9J2P7 530 aa13.02□□□□□ -0.33
CDK3-204ENST00000588812 USP17L13C9JLJ4 530 aa13.02□□□□□ -0.33
CDK3-204ENST00000588812 USP17L11C9JVI0 530 aa13.02□□□□□ -0.33
CDK3-204ENST00000588812 USP17L18D6R9N7 530 aa13.02□□□□□ -0.33
CDK3-204ENST00000588812 USP17L22D6RA61 530 aa13.02□□□□□ -0.33
CDK3-204ENST00000588812 USP17L17D6RBQ6 530 aa13.02□□□□□ -0.33
CDK3-204ENST00000588812 USP17L19D6RCP7 530 aa13.02□□□□□ -0.33
CDK3-204ENST00000588812 USP17L20D6RJB6 530 aa13.02□□□□□ -0.33
CDK3-204ENST00000588812 SH2B2O14492 632 aaPredicted RBP13.02□□□□□ -0.33
CDK3-204ENST00000588812 NDUFB10O96000 172 aa13.02□□□□□ -0.33
CDK3-204ENST00000588812 OSBPP22059 807 aa13.02□□□□□ -0.33
CDK3-204ENST00000588812 FGD1P98174 961 aa13.02□□□□□ -0.33
CDK3-204ENST00000588812 USP17L24Q0WX57 530 aa13.02□□□□□ -0.33
CDK3-204ENST00000588812 COL9A3Q14050 684 aaPredicted RBP13.02□□□□□ -0.33
CDK3-204ENST00000588812 KIAA1755Q5JYT7 1200 aa13.02□□□□□ -0.33
CDK3-204ENST00000588812 TREML2Q5T2D2 321 aa13.02□□□□□ -0.33
CDK3-204ENST00000588812 SLFN13Q68D06 897 aa13.02□□□□□ -0.33
CDK3-204ENST00000588812 BEGAINQ9BUH8 593 aa13.02□□□□□ -0.33
CDK3-204ENST00000588812 RPAP3Q9H6T3 665 aaPredicted RBP13.02□□□□□ -0.33
CDK3-204ENST00000588812 LY9Q9HBG7 655 aa13.02□□□□□ -0.33
CDK3-204ENST00000588812 PNMA3Q9UL41 463 aa13.02□□□□□ -0.33
CDK3-204ENST00000588812 LOC285556D6RIA3 1793 aa13.02□□□□□ -0.33
CDK3-204ENST00000588812 CCDC69A6NI79 296 aa13.01□□□□□ -0.33
CDK3-204ENST00000588812 CA12O43570 354 aa13.01□□□□□ -0.33
CDK3-204ENST00000588812 CPA1P15085 419 aa13.01□□□□□ -0.33
CDK3-204ENST00000588812 SLC1A4P43007 532 aa13.01□□□□□ -0.33
CDK3-204ENST00000588812 IRX3P78415 501 aaPredicted RBP13.01□□□□□ -0.33
CDK3-204ENST00000588812 NFXL1Q6ZNB6 911 aa13.01□□□□□ -0.33
CDK3-204ENST00000588812 CATSPERGQ6ZRH7 1159 aa13.01□□□□□ -0.33
CDK3-204ENST00000588812 CATIPQ7Z7H3 387 aa13.01□□□□□ -0.33
CDK3-204ENST00000588812 SGMS1Q86VZ5 419 aa13.01□□□□□ -0.33
CDK3-204ENST00000588812 FBXL16Q8N461 479 aa13.01□□□□□ -0.33
CDK3-204ENST00000588812 DCAF4Q8WV16 495 aa13.01□□□□□ -0.33
CDK3-204ENST00000588812 TCEANC2Q96MN5 208 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms