RNA–Protein interactions for RNA: ENST00000587411.5

RANBP3-209, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 2,669 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-209ENST00000587411 EPN1Q9Y6I3 576 aaPredicted RBP18.57■□□□□ 0.56
RANBP3-209ENST00000587411 ARID4AP29374 1257 aaPredicted RBP18.57■□□□□ 0.56
RANBP3-209ENST00000587411 KRT9P35527 623 aa18.57■□□□□ 0.56
RANBP3-209ENST00000587411 CKAP4Q07065 602 aaKnown RBP18.57■□□□□ 0.56
RANBP3-209ENST00000587411 DNAJC21Q5F1R6 531 aaKnown RBP18.57■□□□□ 0.56
RANBP3-209ENST00000587411 LDHAL6AQ6ZMR3 332 aa18.57■□□□□ 0.56
RANBP3-209ENST00000587411 ZBTB38Q8NAP3 1195 aaPredicted RBP18.57■□□□□ 0.56
RANBP3-209ENST00000587411 STAG1Q8WVM7 1258 aa18.57■□□□□ 0.56
RANBP3-209ENST00000587411 PYM1Q9BRP8 204 aaKnown RBP18.57■□□□□ 0.56
RANBP3-209ENST00000587411 INCENPQ9NQS7 918 aa18.57■□□□□ 0.56
RANBP3-209ENST00000587411 ALS2Q96Q42 1657 aa18.57■□□□□ 0.56
RANBP3-209ENST00000587411 NDUFA10O95299 355 aa18.57■□□□□ 0.56
RANBP3-209ENST00000587411 CPP00450 1065 aa18.57■□□□□ 0.56
RANBP3-209ENST00000587411 PPP2R5BQ15173 497 aa18.57■□□□□ 0.56
RANBP3-209ENST00000587411 SMYD4Q8IYR2 804 aaPredicted RBP18.57■□□□□ 0.56
RANBP3-209ENST00000587411 CCDC85AQ96PX6 553 aaPredicted RBP18.57■□□□□ 0.56
RANBP3-209ENST00000587411 RNF26Q9BY78 433 aaPredicted RBP18.57■□□□□ 0.56
RANBP3-209ENST00000587411 KCPQ6ZWJ8 1503 aa18.56■□□□□ 0.56
RANBP3-209ENST00000587411 GTF2A1P52655 376 aaPredicted RBP18.56■□□□□ 0.56
RANBP3-209ENST00000587411 PACS2Q86VP3 889 aa18.56■□□□□ 0.56
RANBP3-209ENST00000587411 FANCBQ8NB91 859 aa18.56■□□□□ 0.56
RANBP3-209ENST00000587411 EHBP1Q8NDI1 1231 aa18.56■□□□□ 0.56
RANBP3-209ENST00000587411 COG1Q8WTW3 980 aa18.56■□□□□ 0.56
RANBP3-209ENST00000587411 UBR2Q8IWV8 1755 aa18.56■□□□□ 0.56
RANBP3-209ENST00000587411 ERVV-2B6SEH9 535 aa18.56■□□□□ 0.56
RANBP3-209ENST00000587411 SAR1BQ9Y6B6 198 aa18.56■□□□□ 0.56
RANBP3-209ENST00000587411 KRT2P35908 639 aa18.55■□□□□ 0.56
RANBP3-209ENST00000587411 PAK1Q13153 545 aa18.55■□□□□ 0.56
RANBP3-209ENST00000587411 STIM1Q13586 685 aa18.55■□□□□ 0.56
RANBP3-209ENST00000587411 TCP11X2Q5H9J9 407 aa18.55■□□□□ 0.56
RANBP3-209ENST00000587411 PAPD7Q5XG87 772 aaKnown RBP18.55■□□□□ 0.56
RANBP3-209ENST00000587411 ZNF662Q6ZS27 426 aa18.55■□□□□ 0.56
RANBP3-209ENST00000587411 SMARCC1Q92922 1105 aaPredicted RBP18.55■□□□□ 0.56
RANBP3-209ENST00000587411 VPS16Q9H269 839 aa18.55■□□□□ 0.56
RANBP3-209ENST00000587411 GUCA1BQ9UMX6 200 aa18.55■□□□□ 0.56
RANBP3-209ENST00000587411 JRKLQ9Y4A0 524 aa18.55■□□□□ 0.56
RANBP3-209ENST00000587411 COL18A1P39060 1754 aa18.55■□□□□ 0.56
RANBP3-209ENST00000587411 CASP1P29466 404 aa18.55■□□□□ 0.56
RANBP3-209ENST00000587411 IRX3P78415 501 aaPredicted RBP18.55■□□□□ 0.56
RANBP3-209ENST00000587411 ZNF654Q8IZM8 581 aa18.55■□□□□ 0.56
RANBP3-209ENST00000587411 VGLL2Q8N8G2 317 aa18.55■□□□□ 0.56
RANBP3-209ENST00000587411 TTLL11Q8NHH1 800 aa18.55■□□□□ 0.56
RANBP3-209ENST00000587411 FAM89AQ96GI7 184 aa18.55■□□□□ 0.56
RANBP3-209ENST00000587411 CNNM1Q9NRU3 951 aa18.55■□□□□ 0.56
RANBP3-209ENST00000587411 CDHR2Q9BYE9 1310 aa18.54■□□□□ 0.56
RANBP3-209ENST00000587411 KCNJ18B7U540 433 aa18.54■□□□□ 0.56
RANBP3-209ENST00000587411 MBD4O95243 580 aa18.54■□□□□ 0.56
RANBP3-209ENST00000587411 EIF5P55010 431 aaKnown RBP18.54■□□□□ 0.56
RANBP3-209ENST00000587411 KCNJ12Q14500 433 aa18.54■□□□□ 0.56
RANBP3-209ENST00000587411 RRAGBQ5VZM2 374 aa18.54■□□□□ 0.56
RANBP3-209ENST00000587411 CCDC82Q8N4S0 544 aa18.54■□□□□ 0.56
RANBP3-209ENST00000587411 NACAP1Q9BZK3 213 aa18.54■□□□□ 0.56
RANBP3-209ENST00000587411 TAB2Q9NYJ8 693 aa18.54■□□□□ 0.56
RANBP3-209ENST00000587411 REXO2Q9Y3B8 237 aaKnown RBP18.54■□□□□ 0.56
RANBP3-209ENST00000587411 TACC3Q9Y6A5 838 aa18.54■□□□□ 0.56
RANBP3-209ENST00000587411 RNF225M0QZC1 329 aaPredicted RBP18.54■□□□□ 0.56
RANBP3-209ENST00000587411 SHOX2O60902 331 aaPredicted RBP18.54■□□□□ 0.56
RANBP3-209ENST00000587411 GNAT2P19087 354 aa18.54■□□□□ 0.56
RANBP3-209ENST00000587411 OR8K1Q8NGG5 319 aa18.54■□□□□ 0.56
RANBP3-209ENST00000587411 CRACR2AQ9BSW2 395 aa18.54■□□□□ 0.56
RANBP3-209ENST00000587411 RNF41Q9H4P4 317 aaPredicted RBP18.54■□□□□ 0.56
RANBP3-209ENST00000587411 RMND1Q9NWS8 449 aa18.54■□□□□ 0.56
RANBP3-209ENST00000587411 ZC3H4Q9UPT8 1303 aaKnown RBP18.53■□□□□ 0.56
RANBP3-209ENST00000587411 ANKRD18BA2A2Z9 1011 aa18.53■□□□□ 0.56
RANBP3-209ENST00000587411 ITGA6P23229 1130 aa18.53■□□□□ 0.56
RANBP3-209ENST00000587411 CDC25AP30304 524 aa18.53■□□□□ 0.56
RANBP3-209ENST00000587411 MAP3K12Q12852 859 aa18.53■□□□□ 0.56
RANBP3-209ENST00000587411 A0A087WUV0 522 aaPredicted RBP18.53■□□□□ 0.56
RANBP3-209ENST00000587411 KRT83P78385 493 aa18.53■□□□□ 0.56
RANBP3-209ENST00000587411 TSR1Q2NL82 804 aaKnown RBP18.53■□□□□ 0.56
RANBP3-209ENST00000587411 RRP12Q5JTH9 1297 aaKnown RBP18.53■□□□□ 0.56
RANBP3-209ENST00000587411 PHF20Q9BVI0 1012 aa18.53■□□□□ 0.56
RANBP3-209ENST00000587411 PCDH11XQ9BZA7 1347 aa18.52■□□□□ 0.56
RANBP3-209ENST00000587411 PCDH11YQ9BZA8 1340 aa18.52■□□□□ 0.56
RANBP3-209ENST00000587411 C1orf167Q5SNV9 1468 aa18.52■□□□□ 0.56
RANBP3-209ENST00000587411 RTL9Q8NET4 1388 aa18.52■□□□□ 0.56
RANBP3-209ENST00000587411 GSG1L2A8MUP6 293 aa18.52■□□□□ 0.56
RANBP3-209ENST00000587411 GTPBP6O43824 516 aaPredicted RBP18.52■□□□□ 0.56
RANBP3-209ENST00000587411 PDE8BO95263 885 aa18.52■□□□□ 0.56
RANBP3-209ENST00000587411 PHKA1P46020 1223 aa18.52■□□□□ 0.56
RANBP3-209ENST00000587411 NUP133Q8WUM0 1156 aa18.52■□□□□ 0.56
RANBP3-209ENST00000587411 ZBTB9Q96C00 473 aa18.52■□□□□ 0.56
RANBP3-209ENST00000587411 MMS19Q96T76 1030 aa18.52■□□□□ 0.56
RANBP3-209ENST00000587411 DNAJC7Q99615 494 aa18.52■□□□□ 0.56
RANBP3-209ENST00000587411 CHP1Q99653 195 aa18.52■□□□□ 0.56
RANBP3-209ENST00000587411 TOMM22Q9NS69 142 aa18.52■□□□□ 0.56
RANBP3-209ENST00000587411 XDHP47989 1333 aa18.52■□□□□ 0.56
RANBP3-209ENST00000587411 UBXN1Q04323 297 aa18.52■□□□□ 0.55
RANBP3-209ENST00000587411 IQCEQ6IPM2 695 aa18.52■□□□□ 0.55
RANBP3-209ENST00000587411 KIF6Q6ZMV9 814 aa18.52■□□□□ 0.55
RANBP3-209ENST00000587411 CMTR1Q8N1G2 835 aaKnown RBP18.52■□□□□ 0.55
RANBP3-209ENST00000587411 NELFBQ8WX92 580 aa18.52■□□□□ 0.55
RANBP3-209ENST00000587411 ZKSCAN3Q9BRR0 538 aa18.52■□□□□ 0.55
RANBP3-209ENST00000587411 TNS3Q68CZ2 1445 aa18.51■□□□□ 0.55
RANBP3-209ENST00000587411 A0A1W2PQC6 194 aa18.51■□□□□ 0.55
RANBP3-209ENST00000587411 TDO2P48775 406 aa18.51■□□□□ 0.55
RANBP3-209ENST00000587411 E2F4Q16254 413 aa18.51■□□□□ 0.55
RANBP3-209ENST00000587411 ZNF658Q5TYW1 1059 aaPredicted RBP18.51■□□□□ 0.55
RANBP3-209ENST00000587411 TADA2BQ86TJ2 420 aa18.51■□□□□ 0.55
RANBP3-209ENST00000587411 FAM76AQ8TAV0 307 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms