RNA–Protein interactions for RNA: ENST00000587220.5

ZNF540-205, Transcript of zinc finger protein 540, humanhuman

TSL 2

Gene ZNF540, Length 576 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-205ENST00000587220 MINDY4BA8MYZ0 360 aa12.77□□□□□ -0.37
ZNF540-205ENST00000587220 RAD21O60216 631 aa12.77□□□□□ -0.37
ZNF540-205ENST00000587220 APPP05067 770 aa12.77□□□□□ -0.37
ZNF540-205ENST00000587220 TDO2P48775 406 aa12.77□□□□□ -0.37
ZNF540-205ENST00000587220 TRIM32Q13049 653 aa12.77□□□□□ -0.37
ZNF540-205ENST00000587220 CTR9Q6PD62 1173 aa12.77□□□□□ -0.37
ZNF540-205ENST00000587220 SAMD1Q6SPF0 538 aaPredicted RBP12.77□□□□□ -0.37
ZNF540-205ENST00000587220 LBX2Q6XYB7 198 aa12.77□□□□□ -0.37
ZNF540-205ENST00000587220 C16orf86Q6ZW13 317 aa12.77□□□□□ -0.37
ZNF540-205ENST00000587220 UBE2Q1Q7Z7E8 422 aa12.77□□□□□ -0.37
ZNF540-205ENST00000587220 CLEC10AQ8IUN9 316 aa12.77□□□□□ -0.37
ZNF540-205ENST00000587220 SPICE1Q8N0Z3 855 aa12.77□□□□□ -0.37
ZNF540-205ENST00000587220 APPBP2Q92624 585 aa12.77□□□□□ -0.37
ZNF540-205ENST00000587220 STRBPQ96SI9 672 aaKnown RBP12.77□□□□□ -0.37
ZNF540-205ENST00000587220 APBA2Q99767 749 aa12.77□□□□□ -0.37
ZNF540-205ENST00000587220 CRISPLD2Q9H0B8 497 aa12.77□□□□□ -0.37
ZNF540-205ENST00000587220 MKNK2Q9HBH9 465 aa12.77□□□□□ -0.37
ZNF540-205ENST00000587220 NR2E3Q9Y5X4 410 aa12.77□□□□□ -0.37
ZNF540-205ENST00000587220 CEP290O15078 2479 aa12.76□□□□□ -0.37
ZNF540-205ENST00000587220 EVI5O60447 810 aa12.76□□□□□ -0.37
ZNF540-205ENST00000587220 CNMDO75829 334 aa12.76□□□□□ -0.37
ZNF540-205ENST00000587220 FLOT1O75955 427 aa12.76□□□□□ -0.37
ZNF540-205ENST00000587220 GNAT2P19087 354 aa12.76□□□□□ -0.37
ZNF540-205ENST00000587220 MAP2K5Q13163 448 aa12.76□□□□□ -0.37
ZNF540-205ENST00000587220 PLS1Q14651 629 aa12.76□□□□□ -0.37
ZNF540-205ENST00000587220 HABP4Q5JVS0 413 aaKnown RBP12.76□□□□□ -0.37
ZNF540-205ENST00000587220 MORN1Q5T089 497 aa12.76□□□□□ -0.37
ZNF540-205ENST00000587220 POTEEQ6S8J3 1075 aa12.76□□□□□ -0.37
ZNF540-205ENST00000587220 NECAB2Q7Z6G3 386 aa12.76□□□□□ -0.37
ZNF540-205ENST00000587220 STK11IPQ8N1F8 1099 aa12.76□□□□□ -0.37
ZNF540-205ENST00000587220 ANKLE1Q8NAG6 615 aa12.76□□□□□ -0.37
ZNF540-205ENST00000587220 PAWRQ96IZ0 340 aaKnown RBP12.76□□□□□ -0.37
ZNF540-205ENST00000587220 FSD1Q9BTV5 496 aa12.76□□□□□ -0.37
ZNF540-205ENST00000587220 KANSL2Q9H9L4 492 aa12.76□□□□□ -0.37
ZNF540-205ENST00000587220 GOPCQ9HD26 462 aa12.76□□□□□ -0.37
ZNF540-205ENST00000587220 BTBD7Q9P203 1132 aa12.76□□□□□ -0.37
ZNF540-205ENST00000587220 TMX2Q9Y320 296 aa12.76□□□□□ -0.37
ZNF540-205ENST00000587220 SLC15A5A6NIM6 579 aa12.75□□□□□ -0.37
ZNF540-205ENST00000587220 SMIM22K7EJ46 135 aa12.75□□□□□ -0.37
ZNF540-205ENST00000587220 GPAA1O43292 621 aa12.75□□□□□ -0.37
ZNF540-205ENST00000587220 EEF2P13639 858 aaKnown RBP12.75□□□□□ -0.37
ZNF540-205ENST00000587220 MX1P20591 662 aa12.75□□□□□ -0.37
ZNF540-205ENST00000587220 PTPREP23469 700 aa12.75□□□□□ -0.37
ZNF540-205ENST00000587220 CCL14Q16627 93 aa12.75□□□□□ -0.37
ZNF540-205ENST00000587220 MFSD14CQ5VZR4 134 aa12.75□□□□□ -0.37
ZNF540-205ENST00000587220 GIMAP6Q6P9H5 292 aa12.75□□□□□ -0.37
ZNF540-205ENST00000587220 MB21D1Q8N884 522 aa12.75□□□□□ -0.37
ZNF540-205ENST00000587220 USP6NLQ92738 828 aa12.75□□□□□ -0.37
ZNF540-205ENST00000587220 OSBP2Q969R2 916 aa12.75□□□□□ -0.37
ZNF540-205ENST00000587220 CRBNQ96SW2 442 aa12.75□□□□□ -0.37
ZNF540-205ENST00000587220 NACAP1Q9BZK3 213 aa12.75□□□□□ -0.37
ZNF540-205ENST00000587220 VCPKMTQ9H867 229 aa12.75□□□□□ -0.37
ZNF540-205ENST00000587220 ZNF287Q9HBT7 754 aa12.75□□□□□ -0.37
ZNF540-205ENST00000587220 COLQQ9Y215 455 aaPredicted RBP12.75□□□□□ -0.37
ZNF540-205ENST00000587220 GSG1L2A8MUP6 293 aa12.74□□□□□ -0.37
ZNF540-205ENST00000587220 WDR46O15213 610 aaKnown RBP12.74□□□□□ -0.37
ZNF540-205ENST00000587220 CACNB2Q08289 660 aaPredicted RBP12.74□□□□□ -0.37
ZNF540-205ENST00000587220 SBK1Q52WX2 424 aa12.74□□□□□ -0.37
ZNF540-205ENST00000587220 MAP3K21Q5TCX8 1036 aa12.74□□□□□ -0.37
ZNF540-205ENST00000587220 DPP9Q86TI2 863 aa12.74□□□□□ -0.37
ZNF540-205ENST00000587220 NBPF3Q9H094 633 aa12.74□□□□□ -0.37
ZNF540-205ENST00000587220 SPATC1LQ9H0A9 340 aa12.74□□□□□ -0.37
ZNF540-205ENST00000587220 M0R2C6 588 aa12.73□□□□□ -0.37
ZNF540-205ENST00000587220 GRB14Q14449 540 aa12.73□□□□□ -0.37
ZNF540-205ENST00000587220 KIAA1755Q5JYT7 1200 aa12.73□□□□□ -0.37
ZNF540-205ENST00000587220 ANKRD45Q5TZF3 282 aa12.73□□□□□ -0.37
ZNF540-205ENST00000587220 CHRDL2Q6WN34 429 aa12.73□□□□□ -0.37
ZNF540-205ENST00000587220 NCAPG2Q86XI2 1143 aa12.73□□□□□ -0.37
ZNF540-205ENST00000587220 SIAH1Q8IUQ4 282 aa12.73□□□□□ -0.37
ZNF540-205ENST00000587220 ZNF444Q8N0Y2 327 aaPredicted RBP12.73□□□□□ -0.37
ZNF540-205ENST00000587220 PI4K2BQ8TCG2 481 aa12.73□□□□□ -0.37
ZNF540-205ENST00000587220 OTUD7AQ8TE49 926 aaPredicted RBP12.73□□□□□ -0.37
ZNF540-205ENST00000587220 DIS3LQ8TF46 1054 aaKnown RBP12.73□□□□□ -0.37
ZNF540-205ENST00000587220 MOV10L1Q9BXT6 1211 aaKnown RBP12.73□□□□□ -0.37
ZNF540-205ENST00000587220 MROH8Q9H579 483 aa12.73□□□□□ -0.37
ZNF540-205ENST00000587220 SLC5A4Q9NY91 659 aa12.73□□□□□ -0.37
ZNF540-205ENST00000587220 A0A0G2JMZ2 1700 aa12.73□□□□□ -0.37
ZNF540-205ENST00000587220 ROBO3Q96MS0 1386 aa12.72□□□□□ -0.37
ZNF540-205ENST00000587220 PATL2C9JE40 543 aaKnown RBP12.72□□□□□ -0.37
ZNF540-205ENST00000587220 STRNO43815 780 aa12.72□□□□□ -0.37
ZNF540-205ENST00000587220 SLC3A2P08195 630 aaKnown RBP12.72□□□□□ -0.37
ZNF540-205ENST00000587220 ERCC3P19447 782 aa12.72□□□□□ -0.37
ZNF540-205ENST00000587220 CNGA1P29973 690 aa12.72□□□□□ -0.37
ZNF540-205ENST00000587220 CCND3P30281 292 aaPredicted RBP12.72□□□□□ -0.37
ZNF540-205ENST00000587220 DSG3P32926 999 aa12.72□□□□□ -0.37
ZNF540-205ENST00000587220 SHCBP1Q8NEM2 672 aa12.72□□□□□ -0.37
ZNF540-205ENST00000587220 ATG4CQ96DT6 458 aa12.72□□□□□ -0.37
ZNF540-205ENST00000587220 C11orf49Q9H6J7 331 aa12.72□□□□□ -0.37
ZNF540-205ENST00000587220 OGDHLQ9ULD0 1010 aa12.72□□□□□ -0.37
ZNF540-205ENST00000587220 RLFQ13129 1914 aa12.71□□□□□ -0.37
ZNF540-205ENST00000587220 HOXC6P09630 235 aa12.71□□□□□ -0.37
ZNF540-205ENST00000587220 RASA1P20936 1047 aa12.71□□□□□ -0.37
ZNF540-205ENST00000587220 ADORA2AP29274 412 aa12.71□□□□□ -0.37
ZNF540-205ENST00000587220 IFNL3Q8IZI9 196 aa12.71□□□□□ -0.37
ZNF540-205ENST00000587220 SEC62Q99442 399 aaKnown RBP12.71□□□□□ -0.37
ZNF540-205ENST00000587220 NAPBQ9H115 298 aa12.71□□□□□ -0.37
ZNF540-205ENST00000587220 EPB41L4AQ9HCS5 686 aaPredicted RBP12.71□□□□□ -0.37
ZNF540-205ENST00000587220 PARP14Q460N5 1801 aa12.7□□□□□ -0.38
ZNF540-205ENST00000587220 ZNF236Q9UL36 1845 aa12.7□□□□□ -0.38
ZNF540-205ENST00000587220 PRDM1O75626 825 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms