RNA–Protein interactions for RNA: ENST00000584911.1

LINC00473-205, long intergenic non-protein coding RNA 473, human

TSL 1 (best) BASIC

Gene LINC00473, Length 2,212 nt, Biotype lincRNA, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00473-205	ENST00000584911	DDX46	Q7L014	1031 aa	Known RBP	13.51	□□□□□ -0.25
LINC00473-205	ENST00000584911	TICAM2	Q86XR7	235 aa		13.51	□□□□□ -0.25
LINC00473-205	ENST00000584911	MLKL	Q8NB16	471 aa		13.51	□□□□□ -0.25
LINC00473-205	ENST00000584911	ANKRD20A12P	Q8NF67	263 aa		13.51	□□□□□ -0.25
LINC00473-205	ENST00000584911	SETDB2	Q96T68	719 aa		13.51	□□□□□ -0.25
LINC00473-205	ENST00000584911	BRIP1	Q9BX63	1249 aa		13.51	□□□□□ -0.25
LINC00473-205	ENST00000584911	GPHN	Q9NQX3	736 aa	Predicted RBP	13.51	□□□□□ -0.25
LINC00473-205	ENST00000584911	MAP3K15	Q6ZN16	1313 aa		13.51	□□□□□ -0.25
LINC00473-205	ENST00000584911	SARS	P49591	514 aa	Known RBP	13.51	□□□□□ -0.25
LINC00473-205	ENST00000584911	C2CD5	Q86YS7	1000 aa		13.51	□□□□□ -0.25
LINC00473-205	ENST00000584911	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	13.51	□□□□□ -0.25
LINC00473-205	ENST00000584911	MYO1A	Q9UBC5	1043 aa		13.51	□□□□□ -0.25
LINC00473-205	ENST00000584911	TTF2	Q9UNY4	1162 aa	Known RBP	13.51	□□□□□ -0.25
LINC00473-205	ENST00000584911	FAM169A	Q9Y6X4	670 aa		13.51	□□□□□ -0.25
LINC00473-205	ENST00000584911	SBF1	O95248	1867 aa		13.51	□□□□□ -0.25
LINC00473-205	ENST00000584911		H0YIN7	160 aa		13.5	□□□□□ -0.25
LINC00473-205	ENST00000584911	KIF3C	O14782	793 aa		13.5	□□□□□ -0.25
LINC00473-205	ENST00000584911	FOXN1	O15353	648 aa		13.5	□□□□□ -0.25
LINC00473-205	ENST00000584911	KIF1C	O43896	1103 aa	Known RBP	13.5	□□□□□ -0.25
LINC00473-205	ENST00000584911	IGKV5-2	P06315	115 aa		13.5	□□□□□ -0.25
LINC00473-205	ENST00000584911	LIG3	P49916	1009 aa		13.5	□□□□□ -0.25
LINC00473-205	ENST00000584911	USP14	P54578	494 aa		13.5	□□□□□ -0.25
LINC00473-205	ENST00000584911	RBL2	Q08999	1139 aa		13.5	□□□□□ -0.25
LINC00473-205	ENST00000584911	TFCP2	Q12800	502 aa		13.5	□□□□□ -0.25
LINC00473-205	ENST00000584911	EPHA10	Q5JZY3	1008 aa		13.5	□□□□□ -0.25
LINC00473-205	ENST00000584911	ZMYM1	Q5SVZ6	1142 aa		13.5	□□□□□ -0.25
LINC00473-205	ENST00000584911	C9orf131	Q5VYM1	1079 aa		13.5	□□□□□ -0.25
LINC00473-205	ENST00000584911	TTLL6	Q8N841	843 aa		13.5	□□□□□ -0.25
LINC00473-205	ENST00000584911	CDC5L	Q99459	802 aa	Known RBP	13.5	□□□□□ -0.25
LINC00473-205	ENST00000584911	DBNDD2	Q9BQY9	259 aa		13.5	□□□□□ -0.25
LINC00473-205	ENST00000584911	KCNH3	Q9ULD8	1083 aa		13.5	□□□□□ -0.25
LINC00473-205	ENST00000584911	ARHGAP25	P42331	645 aa		13.49	□□□□□ -0.25
LINC00473-205	ENST00000584911	MORC3	Q14149	939 aa		13.49	□□□□□ -0.25
LINC00473-205	ENST00000584911	CNPY4	Q8N129	248 aa		13.49	□□□□□ -0.25
LINC00473-205	ENST00000584911	COG1	Q8WTW3	980 aa		13.49	□□□□□ -0.25
LINC00473-205	ENST00000584911	A1CF	Q9NQ94	594 aa	Known RBP	13.49	□□□□□ -0.25
LINC00473-205	ENST00000584911	SAMSN1	Q9NSI8	373 aa	Known RBP	13.49	□□□□□ -0.25
LINC00473-205	ENST00000584911	COL11A2	P13942	1736 aa	Predicted RBP	13.49	□□□□□ -0.25
LINC00473-205	ENST00000584911	TEX33	O43247	280 aa		13.49	□□□□□ -0.25
LINC00473-205	ENST00000584911	MFAP3L	O75121	409 aa		13.49	□□□□□ -0.25
LINC00473-205	ENST00000584911	PDE6B	P35913	854 aa		13.49	□□□□□ -0.25
LINC00473-205	ENST00000584911	USP8	P40818	1118 aa		13.49	□□□□□ -0.25
LINC00473-205	ENST00000584911	CCT5	P48643	541 aa		13.49	□□□□□ -0.25
LINC00473-205	ENST00000584911	IRAK1	P51617	712 aa		13.49	□□□□□ -0.25
LINC00473-205	ENST00000584911	ZNF622	Q969S3	477 aa	Known RBP eCLIP	13.49	□□□□□ -0.25
LINC00473-205	ENST00000584911	KAT14	Q9H8E8	782 aa		13.49	□□□□□ -0.25
LINC00473-205	ENST00000584911	DACH1	Q9UI36	760 aa		13.49	□□□□□ -0.25
LINC00473-205	ENST00000584911	MYO6	Q9UM54	1294 aa		13.49	□□□□□ -0.25
LINC00473-205	ENST00000584911	AGPS	O00116	658 aa		13.48	□□□□□ -0.25
LINC00473-205	ENST00000584911	EBAG9	O00559	213 aa		13.48	□□□□□ -0.25
LINC00473-205	ENST00000584911	ABL1	P00519	1130 aa		13.48	□□□□□ -0.25
LINC00473-205	ENST00000584911	PTPN12	Q05209	780 aa	Known RBP	13.48	□□□□□ -0.25
LINC00473-205	ENST00000584911	MAP9	Q49MG5	647 aa		13.48	□□□□□ -0.25
LINC00473-205	ENST00000584911	POTED	Q86YR6	584 aa		13.48	□□□□□ -0.25
LINC00473-205	ENST00000584911	TRMT44	Q8IYL2	757 aa	Known RBP	13.48	□□□□□ -0.25
LINC00473-205	ENST00000584911	CCDC148	Q8NFR7	591 aa		13.48	□□□□□ -0.25
LINC00473-205	ENST00000584911	KLF18	A0A0U1RQI7	1052 aa		13.48	□□□□□ -0.25
LINC00473-205	ENST00000584911	MCM3	P25205	808 aa		13.48	□□□□□ -0.25
LINC00473-205	ENST00000584911	MNAT1	P51948	309 aa		13.48	□□□□□ -0.25
LINC00473-205	ENST00000584911	STIM1	Q13586	685 aa		13.48	□□□□□ -0.25
LINC00473-205	ENST00000584911	FBXW10	Q5XX13	1052 aa		13.48	□□□□□ -0.25
LINC00473-205	ENST00000584911	PPFIBP1	Q86W92	1011 aa		13.48	□□□□□ -0.25
LINC00473-205	ENST00000584911	VPS37D	Q86XT2	251 aa		13.48	□□□□□ -0.25
LINC00473-205	ENST00000584911	CCDC24	Q8N4L8	307 aa		13.48	□□□□□ -0.25
LINC00473-205	ENST00000584911	TRIML1	Q8N9V2	468 aa		13.48	□□□□□ -0.25
LINC00473-205	ENST00000584911	CNBD1	Q8NA66	436 aa		13.48	□□□□□ -0.25
LINC00473-205	ENST00000584911	PRPF38A	Q8NAV1	312 aa	Known RBP	13.48	□□□□□ -0.25
LINC00473-205	ENST00000584911	BANK1	Q8NDB2	785 aa		13.48	□□□□□ -0.25
LINC00473-205	ENST00000584911	RIN2	Q8WYP3	895 aa	Predicted RBP	13.48	□□□□□ -0.25
LINC00473-205	ENST00000584911	CCDC51	Q96ER9	411 aa		13.48	□□□□□ -0.25
LINC00473-205	ENST00000584911	HOOK1	Q9UJC3	728 aa	Known RBP	13.48	□□□□□ -0.25
LINC00473-205	ENST00000584911	ZNF652	Q9Y2D9	606 aa		13.48	□□□□□ -0.25
LINC00473-205	ENST00000584911	TARSL2	A2RTX5	802 aa	Known RBP	13.47	□□□□□ -0.25
LINC00473-205	ENST00000584911	GOLGA8B	A8MQT2	603 aa		13.47	□□□□□ -0.25
LINC00473-205	ENST00000584911	MYCN	P04198	464 aa	Predicted RBP	13.47	□□□□□ -0.25
LINC00473-205	ENST00000584911	POSTN	Q15063	836 aa		13.47	□□□□□ -0.25
LINC00473-205	ENST00000584911	NCAPH2	Q6IBW4	605 aa		13.47	□□□□□ -0.25
LINC00473-205	ENST00000584911	TRAPPC11	Q7Z392	1133 aa		13.47	□□□□□ -0.25
LINC00473-205	ENST00000584911	ACRBP	Q8NEB7	543 aa		13.47	□□□□□ -0.25
LINC00473-205	ENST00000584911	FAM76A	Q8TAV0	307 aa		13.47	□□□□□ -0.25
LINC00473-205	ENST00000584911	SUFU	Q9UMX1	484 aa		13.47	□□□□□ -0.25
LINC00473-205	ENST00000584911	MAST3	O60307	1309 aa		13.47	□□□□□ -0.25
LINC00473-205	ENST00000584911	ATXN2	Q99700	1313 aa	Known RBP	13.47	□□□□□ -0.25
LINC00473-205	ENST00000584911	APP	P05067	770 aa		13.47	□□□□□ -0.25
LINC00473-205	ENST00000584911	ERCC5	P28715	1186 aa	Predicted RBP	13.47	□□□□□ -0.25
LINC00473-205	ENST00000584911	GGCX	P38435	758 aa		13.47	□□□□□ -0.25
LINC00473-205	ENST00000584911	PLCD1	P51178	756 aa		13.47	□□□□□ -0.25
LINC00473-205	ENST00000584911	PPFIA1	Q13136	1202 aa		13.47	□□□□□ -0.25
LINC00473-205	ENST00000584911	SLC9C2	Q5TAH2	1124 aa		13.47	□□□□□ -0.25
LINC00473-205	ENST00000584911	TTLL5	Q6EMB2	1281 aa		13.47	□□□□□ -0.25
LINC00473-205	ENST00000584911	MB21D2	Q8IYB1	491 aa	Predicted RBP	13.47	□□□□□ -0.25
LINC00473-205	ENST00000584911	XAGE2	Q96GT9	111 aa		13.47	□□□□□ -0.25
LINC00473-205	ENST00000584911	RNF181	Q9P0P0	153 aa		13.47	□□□□□ -0.25
LINC00473-205	ENST00000584911	ADD3	Q9UEY8	706 aa	Known RBP	13.47	□□□□□ -0.25
LINC00473-205	ENST00000584911	GRIN2D	O15399	1336 aa		13.47	□□□□□ -0.25
LINC00473-205	ENST00000584911	NEURL1B	A8MQ27	555 aa		13.46	□□□□□ -0.25
LINC00473-205	ENST00000584911	DDX58	O95786	925 aa	Known RBP	13.46	□□□□□ -0.25
LINC00473-205	ENST00000584911	CPLX1	O14810	134 aa		13.45	□□□□□ -0.26
LINC00473-205	ENST00000584911	EIF3H	O15372	352 aa	Known RBP eCLIP	13.45	□□□□□ -0.26
LINC00473-205	ENST00000584911	SRGN	P10124	158 aa		13.45	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms