RNA–Protein interactions for RNA: ENST00000584014.5

ERBB2-216, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-216ENST00000584014 HSPA4P34932 840 aa9.82□□□□□ -0.84
ERBB2-216ENST00000584014 BACE1P56817 501 aa9.82□□□□□ -0.84
ERBB2-216ENST00000584014 IKQ13123 557 aaPredicted RBP9.82□□□□□ -0.84
ERBB2-216ENST00000584014 SART3Q15020 963 aaKnown RBP9.82□□□□□ -0.84
ERBB2-216ENST00000584014 ADCK5Q3MIX3 580 aa9.82□□□□□ -0.84
ERBB2-216ENST00000584014 TMEM67Q5HYA8 995 aa9.82□□□□□ -0.84
ERBB2-216ENST00000584014 TREML2Q5T2D2 321 aa9.82□□□□□ -0.84
ERBB2-216ENST00000584014 NFXL1Q6ZNB6 911 aa9.82□□□□□ -0.84
ERBB2-216ENST00000584014 FASTKD5Q7L8L6 764 aaKnown RBP9.82□□□□□ -0.84
ERBB2-216ENST00000584014 IFNL1Q8IU54 200 aa9.82□□□□□ -0.84
ERBB2-216ENST00000584014 FAM43AQ8N2R8 423 aa9.82□□□□□ -0.84
ERBB2-216ENST00000584014 MS4A4AQ96JQ5 239 aa9.82□□□□□ -0.84
ERBB2-216ENST00000584014 TCEANC2Q96MN5 208 aa9.82□□□□□ -0.84
ERBB2-216ENST00000584014 ZSCAN10Q96SZ4 725 aaPredicted RBP9.82□□□□□ -0.84
ERBB2-216ENST00000584014 NUP88Q99567 741 aaPredicted RBP9.82□□□□□ -0.84
ERBB2-216ENST00000584014 TBC1D2Q9BYX2 928 aa9.82□□□□□ -0.84
ERBB2-216ENST00000584014 TANGO6Q9C0B7 1094 aa9.82□□□□□ -0.84
ERBB2-216ENST00000584014 KAT14Q9H8E8 782 aa9.82□□□□□ -0.84
ERBB2-216ENST00000584014 UPF2Q9HAU5 1272 aaKnown RBP9.82□□□□□ -0.84
ERBB2-216ENST00000584014 IL17RBQ9NRM6 502 aa9.82□□□□□ -0.84
ERBB2-216ENST00000584014 EMILIN3Q9NT22 766 aa9.82□□□□□ -0.84
ERBB2-216ENST00000584014 MTMR4Q9NYA4 1195 aa9.82□□□□□ -0.84
ERBB2-216ENST00000584014 SNX14Q9Y5W7 946 aa9.82□□□□□ -0.84
ERBB2-216ENST00000584014 TNKSO95271 1327 aa9.82□□□□□ -0.84
ERBB2-216ENST00000584014 A0A0G2JLL6 359 aaPredicted RBP9.81□□□□□ -0.84
ERBB2-216ENST00000584014 BTBD19C9JJ37 291 aa9.81□□□□□ -0.84
ERBB2-216ENST00000584014 F5H6K3 240 aa9.81□□□□□ -0.84
ERBB2-216ENST00000584014 IGF2BP3O00425 579 aaKnown RBP eCLIP9.81□□□□□ -0.84
ERBB2-216ENST00000584014 TBC1D8O95759 1140 aa9.81□□□□□ -0.84
ERBB2-216ENST00000584014 FGRP09769 529 aa9.81□□□□□ -0.84
ERBB2-216ENST00000584014 CASTP20810 708 aaKnown RBP9.81□□□□□ -0.84
ERBB2-216ENST00000584014 MCM5P33992 734 aa9.81□□□□□ -0.84
ERBB2-216ENST00000584014 SLC4A3P48751 1232 aa9.81□□□□□ -0.84
ERBB2-216ENST00000584014 USP14P54578 494 aa9.81□□□□□ -0.84
ERBB2-216ENST00000584014 INHBEP58166 350 aa9.81□□□□□ -0.84
ERBB2-216ENST00000584014 IRX3P78415 501 aaPredicted RBP9.81□□□□□ -0.84
ERBB2-216ENST00000584014 MAP2K1Q02750 393 aaPredicted RBP9.81□□□□□ -0.84
ERBB2-216ENST00000584014 KLRC3Q07444 240 aa9.81□□□□□ -0.84
ERBB2-216ENST00000584014 KRT32Q14532 448 aa9.81□□□□□ -0.84
ERBB2-216ENST00000584014 TAF1CQ15572 869 aaPredicted RBP9.81□□□□□ -0.84
ERBB2-216ENST00000584014 CCDC96Q2M329 555 aa9.81□□□□□ -0.84
ERBB2-216ENST00000584014 IFIT1BQ5T764 474 aaKnown RBP9.81□□□□□ -0.84
ERBB2-216ENST00000584014 PRRT2Q7Z6L0 340 aaPredicted RBP9.81□□□□□ -0.84
ERBB2-216ENST00000584014 SIAH1Q8IUQ4 282 aa9.81□□□□□ -0.84
ERBB2-216ENST00000584014 PTPN18Q99952 460 aa9.81□□□□□ -0.84
ERBB2-216ENST00000584014 KIAA1683Q9H0B3 1180 aa9.81□□□□□ -0.84
ERBB2-216ENST00000584014 RPAP3Q9H6T3 665 aaPredicted RBP9.81□□□□□ -0.84
ERBB2-216ENST00000584014 NYAP2Q9P242 653 aa9.81□□□□□ -0.84
ERBB2-216ENST00000584014 KCNH4Q9UQ05 1017 aa9.81□□□□□ -0.84
ERBB2-216ENST00000584014 IGKV6D-41A0A0C4DH26 115 aa9.8□□□□□ -0.84
ERBB2-216ENST00000584014 CYP2C8P10632 490 aa9.8□□□□□ -0.84
ERBB2-216ENST00000584014 TOP1P11387 765 aaKnown RBP9.8□□□□□ -0.84
ERBB2-216ENST00000584014 OSBPP22059 807 aa9.8□□□□□ -0.84
ERBB2-216ENST00000584014 TM4SF4P48230 202 aa9.8□□□□□ -0.84
ERBB2-216ENST00000584014 PABPC4Q13310 644 aaKnown RBP eCLIP9.8□□□□□ -0.84
ERBB2-216ENST00000584014 WTAPQ15007 396 aa9.8□□□□□ -0.84
ERBB2-216ENST00000584014 KIAA1755Q5JYT7 1200 aa9.8□□□□□ -0.84
ERBB2-216ENST00000584014 PPP4R3BQ5MIZ7 849 aa9.8□□□□□ -0.84
ERBB2-216ENST00000584014 FAM83BQ5T0W9 1011 aa9.8□□□□□ -0.84
ERBB2-216ENST00000584014 SLFN13Q68D06 897 aa9.8□□□□□ -0.84
ERBB2-216ENST00000584014 BLOC1S2Q6QNY1 142 aa9.8□□□□□ -0.84
ERBB2-216ENST00000584014 RAB11FIP4Q86YS3 637 aa9.8□□□□□ -0.84
ERBB2-216ENST00000584014 SMCR8Q8TEV9 937 aaPredicted RBP9.8□□□□□ -0.84
ERBB2-216ENST00000584014 TMEM47Q9BQJ4 181 aa9.8□□□□□ -0.84
ERBB2-216ENST00000584014 VCPKMTQ9H867 229 aa9.8□□□□□ -0.84
ERBB2-216ENST00000584014 GPCPD1Q9NPB8 672 aa9.8□□□□□ -0.84
ERBB2-216ENST00000584014 GPHNQ9NQX3 736 aaPredicted RBP9.8□□□□□ -0.84
ERBB2-216ENST00000584014 RNF186Q9NXI6 227 aa9.8□□□□□ -0.84
ERBB2-216ENST00000584014 TMX2Q9Y320 296 aa9.8□□□□□ -0.84
ERBB2-216ENST00000584014 FRMPD2Q68DX3 1309 aaPredicted RBP9.8□□□□□ -0.84
ERBB2-216ENST00000584014 CCDC69A6NI79 296 aa9.79□□□□□ -0.84
ERBB2-216ENST00000584014 NDUFB10O96000 172 aa9.79□□□□□ -0.84
ERBB2-216ENST00000584014 VCAM1P19320 739 aa9.79□□□□□ -0.84
ERBB2-216ENST00000584014 PSMA5P28066 241 aa9.79□□□□□ -0.84
ERBB2-216ENST00000584014 COL9A3Q14050 684 aaPredicted RBP9.79□□□□□ -0.84
ERBB2-216ENST00000584014 CCDC178Q5BJE1 867 aa9.79□□□□□ -0.84
ERBB2-216ENST00000584014 GPAT2Q6NUI2 795 aa9.79□□□□□ -0.84
ERBB2-216ENST00000584014 KCTD1Q719H9 257 aa9.79□□□□□ -0.84
ERBB2-216ENST00000584014 NOL8Q76FK4 1167 aaKnown RBP9.79□□□□□ -0.84
ERBB2-216ENST00000584014 RASGRP2Q7LDG7 609 aa9.79□□□□□ -0.84
ERBB2-216ENST00000584014 ANKRD23Q86SG2 305 aa9.79□□□□□ -0.84
ERBB2-216ENST00000584014 MB21D2Q8IYB1 491 aaPredicted RBP9.79□□□□□ -0.84
ERBB2-216ENST00000584014 ENAHQ8N8S7 591 aaPredicted RBP9.79□□□□□ -0.84
ERBB2-216ENST00000584014 NUP133Q8WUM0 1156 aa9.79□□□□□ -0.84
ERBB2-216ENST00000584014 LARP6Q9BRS8 491 aaKnown RBP9.79□□□□□ -0.84
ERBB2-216ENST00000584014 PAGR1Q9BTK6 254 aa9.79□□□□□ -0.84
ERBB2-216ENST00000584014 C22orf23Q9BZE7 217 aa9.79□□□□□ -0.84
ERBB2-216ENST00000584014 UPF3BQ9BZI7 483 aaKnown RBP9.79□□□□□ -0.84
ERBB2-216ENST00000584014 SENP2Q9HC62 589 aa9.79□□□□□ -0.84
ERBB2-216ENST00000584014 ZFYVE28Q9HCC9 887 aa9.79□□□□□ -0.84
ERBB2-216ENST00000584014 AGTPBP1Q9UPW5 1226 aa9.79□□□□□ -0.84
ERBB2-216ENST00000584014 CTDP1Q9Y5B0 961 aaPredicted RBP9.79□□□□□ -0.84
ERBB2-216ENST00000584014 PTPRFP10586 1907 aa9.79□□□□□ -0.84
ERBB2-216ENST00000584014 USP17L15C9J2P7 530 aa9.78□□□□□ -0.84
ERBB2-216ENST00000584014 USP17L13C9JLJ4 530 aa9.78□□□□□ -0.84
ERBB2-216ENST00000584014 USP17L11C9JVI0 530 aa9.78□□□□□ -0.84
ERBB2-216ENST00000584014 USP17L18D6R9N7 530 aa9.78□□□□□ -0.84
ERBB2-216ENST00000584014 USP17L22D6RA61 530 aa9.78□□□□□ -0.84
ERBB2-216ENST00000584014 USP17L17D6RBQ6 530 aa9.78□□□□□ -0.84
ERBB2-216ENST00000584014 USP17L19D6RCP7 530 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms