RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 RCAN1P53805 252 aa13.65□□□□□ -0.22
CDRT1-207ENST00000583965 AK2P54819 239 aa13.65□□□□□ -0.22
CDRT1-207ENST00000583965 EVCP57679 992 aa13.65□□□□□ -0.22
CDRT1-207ENST00000583965 RGMBQ6NW40 437 aa13.65□□□□□ -0.22
CDRT1-207ENST00000583965 SYNE3Q6ZMZ3 975 aa13.65□□□□□ -0.22
CDRT1-207ENST00000583965 CATIPQ7Z7H3 387 aa13.65□□□□□ -0.22
CDRT1-207ENST00000583965 PNMA1Q8ND90 353 aa13.65□□□□□ -0.22
CDRT1-207ENST00000583965 GMCL1P1Q8NEA9 526 aa13.65□□□□□ -0.22
CDRT1-207ENST00000583965 ACER1Q8TDN7 264 aa13.65□□□□□ -0.22
CDRT1-207ENST00000583965 OTUD5Q96G74 571 aa13.65□□□□□ -0.22
CDRT1-207ENST00000583965 WNK4Q96J92 1243 aa13.65□□□□□ -0.22
CDRT1-207ENST00000583965 FEZ1Q99689 392 aa13.65□□□□□ -0.22
CDRT1-207ENST00000583965 ABT1Q9ULW3 272 aaKnown RBP13.65□□□□□ -0.22
CDRT1-207ENST00000583965 KCNH4Q9UQ05 1017 aa13.65□□□□□ -0.22
CDRT1-207ENST00000583965 A0A1W2PRG0 241 aa13.64□□□□□ -0.23
CDRT1-207ENST00000583965 DDAH1O94760 285 aa13.64□□□□□ -0.23
CDRT1-207ENST00000583965 ECE1P42892 770 aa13.64□□□□□ -0.23
CDRT1-207ENST00000583965 ZNF157P51786 506 aaPredicted RBP13.64□□□□□ -0.23
CDRT1-207ENST00000583965 BACE1P56817 501 aa13.64□□□□□ -0.23
CDRT1-207ENST00000583965 SPP2Q13103 211 aa13.64□□□□□ -0.23
CDRT1-207ENST00000583965 SH3D19Q5HYK7 790 aa13.64□□□□□ -0.23
CDRT1-207ENST00000583965 APOA5Q6Q788 366 aa13.64□□□□□ -0.23
CDRT1-207ENST00000583965 USP17L2Q6R6M4 530 aa13.64□□□□□ -0.23
CDRT1-207ENST00000583965 CCDC84Q86UT8 332 aaPredicted RBP13.64□□□□□ -0.23
CDRT1-207ENST00000583965 ZNF654Q8IZM8 581 aa13.64□□□□□ -0.23
CDRT1-207ENST00000583965 LPAR1Q92633 364 aa13.64□□□□□ -0.23
CDRT1-207ENST00000583965 CCDC102AQ96A19 550 aa13.64□□□□□ -0.23
CDRT1-207ENST00000583965 MAP3K14Q99558 947 aa13.64□□□□□ -0.23
CDRT1-207ENST00000583965 VCPKMTQ9H867 229 aa13.64□□□□□ -0.23
CDRT1-207ENST00000583965 GPHNQ9NQX3 736 aaPredicted RBP13.64□□□□□ -0.23
CDRT1-207ENST00000583965 SLC12A7Q9Y666 1083 aa13.64□□□□□ -0.23
CDRT1-207ENST00000583965 RLFQ13129 1914 aa13.64□□□□□ -0.23
CDRT1-207ENST00000583965 COL11A1P12107 1806 aaPredicted RBP13.63□□□□□ -0.23
CDRT1-207ENST00000583965 KLF18A0A0U1RQI7 1052 aa13.63□□□□□ -0.23
CDRT1-207ENST00000583965 TRIM75PA6NK02 468 aa13.63□□□□□ -0.23
CDRT1-207ENST00000583965 IRF6O14896 467 aa13.63□□□□□ -0.23
CDRT1-207ENST00000583965 SLC10A3P09131 477 aa13.63□□□□□ -0.23
CDRT1-207ENST00000583965 APOBRQ0VD83 1088 aa13.63□□□□□ -0.23
CDRT1-207ENST00000583965 MTMR2Q13614 643 aa13.63□□□□□ -0.23
CDRT1-207ENST00000583965 SPRYD7Q5W111 196 aa13.63□□□□□ -0.23
CDRT1-207ENST00000583965 RASAL3Q86YV0 1011 aa13.63□□□□□ -0.23
CDRT1-207ENST00000583965 LRRC47Q8N1G4 583 aaKnown RBP13.63□□□□□ -0.23
CDRT1-207ENST00000583965 DCAF4Q8WV16 495 aa13.63□□□□□ -0.23
CDRT1-207ENST00000583965 CNKSR2Q8WXI2 1034 aa13.63□□□□□ -0.23
CDRT1-207ENST00000583965 ZNF274Q96GC6 653 aaPredicted RBP13.63□□□□□ -0.23
CDRT1-207ENST00000583965 C12orf42Q96LP6 360 aa13.63□□□□□ -0.23
CDRT1-207ENST00000583965 SENP2Q9HC62 589 aa13.63□□□□□ -0.23
CDRT1-207ENST00000583965 LIMCH1Q9UPQ0 1083 aa13.63□□□□□ -0.23
CDRT1-207ENST00000583965 NID2Q14112 1375 aa13.62□□□□□ -0.23
CDRT1-207ENST00000583965 A0A0G2JLL6 359 aaPredicted RBP13.62□□□□□ -0.23
CDRT1-207ENST00000583965 RASSF10A6NK89 507 aa13.62□□□□□ -0.23
CDRT1-207ENST00000583965 F5H6K3 240 aa13.62□□□□□ -0.23
CDRT1-207ENST00000583965 ZBTB43O43298 467 aa13.62□□□□□ -0.23
CDRT1-207ENST00000583965 GJA5P36382 358 aa13.62□□□□□ -0.23
CDRT1-207ENST00000583965 GTF2A2P52657 109 aa13.62□□□□□ -0.23
CDRT1-207ENST00000583965 KLRC3Q07444 240 aa13.62□□□□□ -0.23
CDRT1-207ENST00000583965 TROAPQ12815 778 aa13.62□□□□□ -0.23
CDRT1-207ENST00000583965 SNAPC2Q13487 334 aa13.62□□□□□ -0.23
CDRT1-207ENST00000583965 PPP2R5BQ15173 497 aa13.62□□□□□ -0.23
CDRT1-207ENST00000583965 PRRT2Q7Z6L0 340 aaPredicted RBP13.62□□□□□ -0.23
CDRT1-207ENST00000583965 PROCA1Q8NCQ7 364 aaPredicted RBP13.62□□□□□ -0.23
CDRT1-207ENST00000583965 SNX21Q969T3 373 aa13.62□□□□□ -0.23
CDRT1-207ENST00000583965 GMCL1Q96IK5 515 aa13.62□□□□□ -0.23
CDRT1-207ENST00000583965 ZSCAN31Q96LW9 406 aaPredicted RBP13.62□□□□□ -0.23
CDRT1-207ENST00000583965 IPO9Q96P70 1041 aaKnown RBP13.62□□□□□ -0.23
CDRT1-207ENST00000583965 TMOD4Q9NZQ9 345 aa13.62□□□□□ -0.23
CDRT1-207ENST00000583965 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.62□□□□□ -0.23
CDRT1-207ENST00000583965 BRPF3Q9ULD4 1205 aa13.62□□□□□ -0.23
CDRT1-207ENST00000583965 GOLGA8BA8MQT2 603 aa13.61□□□□□ -0.23
CDRT1-207ENST00000583965 WDR46O15213 610 aaKnown RBP13.61□□□□□ -0.23
CDRT1-207ENST00000583965 NDUFB10O96000 172 aa13.61□□□□□ -0.23
CDRT1-207ENST00000583965 SNHG28P0DPA3 235 aa13.61□□□□□ -0.23
CDRT1-207ENST00000583965 PDHBP11177 359 aa13.61□□□□□ -0.23
CDRT1-207ENST00000583965 KIF5BP33176 963 aa13.61□□□□□ -0.23
CDRT1-207ENST00000583965 HMGCS2P54868 508 aa13.61□□□□□ -0.23
CDRT1-207ENST00000583965 ZYXQ15942 572 aaKnown RBP13.61□□□□□ -0.23
CDRT1-207ENST00000583965 ASPRV1Q53RT3 343 aa13.61□□□□□ -0.23
CDRT1-207ENST00000583965 GPATCH4Q5T3I0 446 aaKnown RBP13.61□□□□□ -0.23
CDRT1-207ENST00000583965 SLFN13Q68D06 897 aa13.61□□□□□ -0.23
CDRT1-207ENST00000583965 FASTKD5Q7L8L6 764 aaKnown RBP13.61□□□□□ -0.23
CDRT1-207ENST00000583965 CHMP4CQ96CF2 233 aa13.61□□□□□ -0.23
CDRT1-207ENST00000583965 SH2B1Q9NRF2 756 aaPredicted RBP13.61□□□□□ -0.23
CDRT1-207ENST00000583965 EMILIN3Q9NT22 766 aa13.61□□□□□ -0.23
CDRT1-207ENST00000583965 CCDC196A0A1B0GTZ2 297 aa13.6□□□□□ -0.23
CDRT1-207ENST00000583965 PARP1P09874 1014 aaKnown RBP13.6□□□□□ -0.23
CDRT1-207ENST00000583965 CETPP11597 493 aa13.6□□□□□ -0.23
CDRT1-207ENST00000583965 PDIA3P30101 505 aaKnown RBP13.6□□□□□ -0.23
CDRT1-207ENST00000583965 SLC1A4P43007 532 aa13.6□□□□□ -0.23
CDRT1-207ENST00000583965 METAP2P50579 478 aaKnown RBP eCLIP13.6□□□□□ -0.23
CDRT1-207ENST00000583965 GRM4Q14833 912 aa13.6□□□□□ -0.23
CDRT1-207ENST00000583965 DEFB115Q30KQ5 88 aa13.6□□□□□ -0.23
CDRT1-207ENST00000583965 MICU3Q86XE3 530 aa13.6□□□□□ -0.23
CDRT1-207ENST00000583965 FANCBQ8NB91 859 aa13.6□□□□□ -0.23
CDRT1-207ENST00000583965 CTCFLQ8NI51 663 aaPredicted RBP13.6□□□□□ -0.23
CDRT1-207ENST00000583965 NUP133Q8WUM0 1156 aa13.6□□□□□ -0.23
CDRT1-207ENST00000583965 MS4A4AQ96JQ5 239 aa13.6□□□□□ -0.23
CDRT1-207ENST00000583965 RBM28Q9NW13 759 aaKnown RBP13.6□□□□□ -0.23
CDRT1-207ENST00000583965 TPCN1Q9ULQ1 816 aa13.6□□□□□ -0.23
CDRT1-207ENST00000583965 NAP1L2Q9ULW6 460 aaPredicted RBP13.6□□□□□ -0.23
CDRT1-207ENST00000583965 MANSC4A6NHS7 340 aaPredicted RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms