RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 HIP1O00291 1037 aa29.67■■■□□ 2.34
TSEN54-209ENST00000583454 FOXP2O15409 715 aa29.67■■■□□ 2.34
TSEN54-209ENST00000583454 APPP05067 770 aa29.67■■■□□ 2.34
TSEN54-209ENST00000583454 GUCY1A2P33402 732 aa29.67■■■□□ 2.34
TSEN54-209ENST00000583454 TRIB2Q92519 343 aa29.67■■■□□ 2.34
TSEN54-209ENST00000583454 HTATIP2Q9BUP3 242 aa29.67■■■□□ 2.34
TSEN54-209ENST00000583454 CAPN2P17655 700 aa29.66■■■□□ 2.34
TSEN54-209ENST00000583454 ERVK-9P63128 1117 aa29.66■■■□□ 2.34
TSEN54-209ENST00000583454 ERVK-24P63145 666 aa29.66■■■□□ 2.34
TSEN54-209ENST00000583454 CERKLQ49MI3 558 aaPredicted RBP29.66■■■□□ 2.34
TSEN54-209ENST00000583454 ACER1Q8TDN7 264 aa29.66■■■□□ 2.34
TSEN54-209ENST00000583454 DYNLL2Q96FJ2 89 aa29.66■■■□□ 2.34
TSEN54-209ENST00000583454 NACAP1Q9BZK3 213 aa29.66■■■□□ 2.34
TSEN54-209ENST00000583454 PORCNQ9H237 461 aa29.66■■■□□ 2.34
TSEN54-209ENST00000583454 PPP4R2Q9NY27 417 aa29.66■■■□□ 2.34
TSEN54-209ENST00000583454 RLFQ13129 1914 aa29.66■■■□□ 2.34
TSEN54-209ENST00000583454 TFRCP02786 760 aaKnown RBP29.65■■■□□ 2.34
TSEN54-209ENST00000583454 ABCB5Q2M3G0 1257 aa29.65■■■□□ 2.34
TSEN54-209ENST00000583454 USP6NLQ92738 828 aa29.65■■■□□ 2.34
TSEN54-209ENST00000583454 KIAA1683Q9H0B3 1180 aa29.65■■■□□ 2.34
TSEN54-209ENST00000583454 CNMDO75829 334 aa29.64■■■□□ 2.34
TSEN54-209ENST00000583454 TDO2P48775 406 aa29.64■■■□□ 2.34
TSEN54-209ENST00000583454 ZYXQ15942 572 aaKnown RBP29.64■■■□□ 2.34
TSEN54-209ENST00000583454 MAP3K21Q5TCX8 1036 aa29.64■■■□□ 2.34
TSEN54-209ENST00000583454 C16orf86Q6ZW13 317 aa29.64■■■□□ 2.34
TSEN54-209ENST00000583454 ZNF589Q86UQ0 364 aaPredicted RBP29.64■■■□□ 2.34
TSEN54-209ENST00000583454 SLC44A5Q8NCS7 719 aa29.64■■■□□ 2.34
TSEN54-209ENST00000583454 PRO3102Q9H379 93 aa29.64■■■□□ 2.34
TSEN54-209ENST00000583454 DIAPH3Q9NSV4 1193 aa29.64■■■□□ 2.34
TSEN54-209ENST00000583454 CDK8P49336 464 aa29.63■■■□□ 2.33
TSEN54-209ENST00000583454 RAB3GAP1Q15042 981 aa29.63■■■□□ 2.33
TSEN54-209ENST00000583454 VPS53Q5VIR6 699 aa29.63■■■□□ 2.33
TSEN54-209ENST00000583454 CHRDL2Q6WN34 429 aa29.63■■■□□ 2.33
TSEN54-209ENST00000583454 GTF3C2Q8WUA4 911 aaPredicted RBP29.63■■■□□ 2.33
TSEN54-209ENST00000583454 FEZ1Q99689 392 aa29.63■■■□□ 2.33
TSEN54-209ENST00000583454 LAMA3Q16787 3333 aa29.63■■■□□ 2.33
TSEN54-209ENST00000583454 FRMPD3Q5JV73 1810 aa29.62■■■□□ 2.33
TSEN54-209ENST00000583454 DNAH12Q6ZR08 3092 aa29.62■■■□□ 2.33
TSEN54-209ENST00000583454 XRCC5P13010 732 aaKnown RBP29.62■■■□□ 2.33
TSEN54-209ENST00000583454 VCAM1P19320 739 aa29.62■■■□□ 2.33
TSEN54-209ENST00000583454 CYP2B6P20813 491 aa29.62■■■□□ 2.33
TSEN54-209ENST00000583454 MAPK4P31152 587 aa29.62■■■□□ 2.33
TSEN54-209ENST00000583454 MNX1P50219 401 aaPredicted RBP29.62■■■□□ 2.33
TSEN54-209ENST00000583454 ALX1Q15699 326 aa29.62■■■□□ 2.33
TSEN54-209ENST00000583454 SKAP1Q86WV1 359 aa29.62■■■□□ 2.33
TSEN54-209ENST00000583454 DIS3LQ8TF46 1054 aaKnown RBP29.62■■■□□ 2.33
TSEN54-209ENST00000583454 SOCS4Q8WXH5 440 aa29.62■■■□□ 2.33
TSEN54-209ENST00000583454 PAGR1Q9BTK6 254 aa29.62■■■□□ 2.33
TSEN54-209ENST00000583454 CCDC171Q6TFL3 1326 aa29.62■■■□□ 2.33
TSEN54-209ENST00000583454 RPTORQ8N122 1335 aa29.62■■■□□ 2.33
TSEN54-209ENST00000583454 ROBO3Q96MS0 1386 aa29.62■■■□□ 2.33
TSEN54-209ENST00000583454 A0A0G2JMZ2 1700 aa29.62■■■□□ 2.33
TSEN54-209ENST00000583454 MINDY4BA8MYZ0 360 aa29.61■■■□□ 2.33
TSEN54-209ENST00000583454 MORN1Q5T089 497 aa29.61■■■□□ 2.33
TSEN54-209ENST00000583454 CWC27Q6UX04 472 aaKnown RBP29.61■■■□□ 2.33
TSEN54-209ENST00000583454 CATSPERGQ6ZRH7 1159 aa29.61■■■□□ 2.33
TSEN54-209ENST00000583454 PAWRQ96IZ0 340 aaKnown RBP29.61■■■□□ 2.33
TSEN54-209ENST00000583454 NUDT12Q9BQG2 462 aa29.61■■■□□ 2.33
TSEN54-209ENST00000583454 NAPBQ9H115 298 aa29.61■■■□□ 2.33
TSEN54-209ENST00000583454 PARP14Q460N5 1801 aa29.6■■■□□ 2.33
TSEN54-209ENST00000583454 USP17L15C9J2P7 530 aa29.6■■■□□ 2.33
TSEN54-209ENST00000583454 USP17L13C9JLJ4 530 aa29.6■■■□□ 2.33
TSEN54-209ENST00000583454 USP17L11C9JVI0 530 aa29.6■■■□□ 2.33
TSEN54-209ENST00000583454 USP17L18D6R9N7 530 aa29.6■■■□□ 2.33
TSEN54-209ENST00000583454 USP17L22D6RA61 530 aa29.6■■■□□ 2.33
TSEN54-209ENST00000583454 USP17L17D6RBQ6 530 aa29.6■■■□□ 2.33
TSEN54-209ENST00000583454 USP17L19D6RCP7 530 aa29.6■■■□□ 2.33
TSEN54-209ENST00000583454 USP17L20D6RJB6 530 aa29.6■■■□□ 2.33
TSEN54-209ENST00000583454 USP14P54578 494 aa29.6■■■□□ 2.33
TSEN54-209ENST00000583454 MFAP1P55081 439 aaKnown RBP29.6■■■□□ 2.33
TSEN54-209ENST00000583454 USP17L24Q0WX57 530 aa29.6■■■□□ 2.33
TSEN54-209ENST00000583454 GPR142Q7Z601 462 aa29.6■■■□□ 2.33
TSEN54-209ENST00000583454 HMX1Q9NP08 348 aaPredicted RBP29.6■■■□□ 2.33
TSEN54-209ENST00000583454 RABGAP1Q9Y3P9 1069 aa29.6■■■□□ 2.33
TSEN54-209ENST00000583454 HSPD1P10809 573 aaKnown RBP29.59■■■□□ 2.33
TSEN54-209ENST00000583454 SEPT2Q15019 361 aa29.59■■■□□ 2.33
TSEN54-209ENST00000583454 LBX2Q6XYB7 198 aa29.59■■■□□ 2.33
TSEN54-209ENST00000583454 CABP5Q9NP86 173 aa29.59■■■□□ 2.33
TSEN54-209ENST00000583454 RBM27Q9P2N5 1060 aaKnown RBP29.59■■■□□ 2.33
TSEN54-209ENST00000583454 A0A1W2PRG0 241 aa29.58■■■□□ 2.33
TSEN54-209ENST00000583454 ANKLE1Q8NAG6 615 aa29.58■■■□□ 2.33
TSEN54-209ENST00000583454 CCDC17Q96LX7 622 aa29.58■■■□□ 2.33
TSEN54-209ENST00000583454 CHMLP26374 656 aa29.57■■■□□ 2.32
TSEN54-209ENST00000583454 PLEKHH3Q7Z736 793 aa29.57■■■□□ 2.32
TSEN54-209ENST00000583454 NR2E3Q9Y5X4 410 aa29.57■■■□□ 2.32
TSEN54-209ENST00000583454 ZMYM6O95789 1325 aa29.56■■■□□ 2.32
TSEN54-209ENST00000583454 FGAP02671 866 aa29.56■■■□□ 2.32
TSEN54-209ENST00000583454 PRKAR2AP13861 404 aaKnown RBP29.56■■■□□ 2.32
TSEN54-209ENST00000583454 CCL14Q16627 93 aa29.56■■■□□ 2.32
TSEN54-209ENST00000583454 BTBD7Q9P203 1132 aa29.56■■■□□ 2.32
TSEN54-209ENST00000583454 OGDHLQ9ULD0 1010 aa29.56■■■□□ 2.32
TSEN54-209ENST00000583454 SPDYE16A6NNV3 312 aaPredicted RBP29.55■■■□□ 2.32
TSEN54-209ENST00000583454 AKR1B1P15121 316 aa29.55■■■□□ 2.32
TSEN54-209ENST00000583454 PPARAQ07869 468 aa29.55■■■□□ 2.32
TSEN54-209ENST00000583454 BMP2KLQ5H9B9 411 aa29.55■■■□□ 2.32
TSEN54-209ENST00000583454 TMEM179Q6ZVK1 233 aa29.55■■■□□ 2.32
TSEN54-209ENST00000583454 NECAB2Q7Z6G3 386 aa29.55■■■□□ 2.32
TSEN54-209ENST00000583454 RPAP3Q9H6T3 665 aaPredicted RBP29.55■■■□□ 2.32
TSEN54-209ENST00000583454 ZNF236Q9UL36 1845 aa29.55■■■□□ 2.32
TSEN54-209ENST00000583454 RGS2P41220 211 aa29.54■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms