RNA–Protein interactions for RNA: ENST00000581180.1

MKS1-210, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 899 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-210ENST00000581180 FEZ1Q99689 392 aa17.78■□□□□ 0.44
MKS1-210ENST00000581180 MTA3Q9BTC8 594 aa17.78■□□□□ 0.44
MKS1-210ENST00000581180 SH2D4AQ9H788 454 aa17.78■□□□□ 0.44
MKS1-210ENST00000581180 VCPKMTQ9H867 229 aa17.78■□□□□ 0.44
MKS1-210ENST00000581180 STX8Q9UNK0 236 aa17.78■□□□□ 0.44
MKS1-210ENST00000581180 TNKSO95271 1327 aa17.77■□□□□ 0.44
MKS1-210ENST00000581180 BTBD19C9JJ37 291 aa17.77■□□□□ 0.44
MKS1-210ENST00000581180 IGF2BP3O00425 579 aaKnown RBP eCLIP17.77■□□□□ 0.44
MKS1-210ENST00000581180 MCM5P33992 734 aa17.77■□□□□ 0.44
MKS1-210ENST00000581180 EXOSC10Q01780 885 aaKnown RBP17.77■□□□□ 0.44
MKS1-210ENST00000581180 ZYXQ15942 572 aaKnown RBP17.77■□□□□ 0.44
MKS1-210ENST00000581180 FASTKD5Q7L8L6 764 aaKnown RBP17.77■□□□□ 0.44
MKS1-210ENST00000581180 IGDCC4Q8TDY8 1250 aa17.77■□□□□ 0.44
MKS1-210ENST00000581180 JAKMIP1Q96N16 626 aaKnown RBP17.77■□□□□ 0.44
MKS1-210ENST00000581180 TMEM47Q9BQJ4 181 aa17.77■□□□□ 0.44
MKS1-210ENST00000581180 WDR19Q8NEZ3 1342 aa17.76■□□□□ 0.43
MKS1-210ENST00000581180 PRC1O43663 620 aa17.76■□□□□ 0.43
MKS1-210ENST00000581180 TOP1P11387 765 aaKnown RBP17.76■□□□□ 0.43
MKS1-210ENST00000581180 GADL1Q6ZQY3 521 aa17.76■□□□□ 0.43
MKS1-210ENST00000581180 DHX32Q7L7V1 743 aaKnown RBP17.76■□□□□ 0.43
MKS1-210ENST00000581180 ANKRD23Q86SG2 305 aa17.76■□□□□ 0.43
MKS1-210ENST00000581180 IFNL1Q8IU54 200 aa17.76■□□□□ 0.43
MKS1-210ENST00000581180 LRRC47Q8N1G4 583 aaKnown RBP17.76■□□□□ 0.43
MKS1-210ENST00000581180 UBAC1Q9BSL1 405 aa17.76■□□□□ 0.43
MKS1-210ENST00000581180 TM6SF1Q9BZW5 370 aa17.76■□□□□ 0.43
MKS1-210ENST00000581180 TMOD4Q9NZQ9 345 aa17.76■□□□□ 0.43
MKS1-210ENST00000581180 IFIT3O14879 490 aaKnown RBP17.75■□□□□ 0.43
MKS1-210ENST00000581180 HMGB1P09429 215 aaKnown RBP17.75■□□□□ 0.43
MKS1-210ENST00000581180 CPA1P15085 419 aa17.75■□□□□ 0.43
MKS1-210ENST00000581180 PSMA5P28066 241 aa17.75■□□□□ 0.43
MKS1-210ENST00000581180 TREML2Q5T2D2 321 aa17.75■□□□□ 0.43
MKS1-210ENST00000581180 FAM43AQ8N2R8 423 aa17.75■□□□□ 0.43
MKS1-210ENST00000581180 GMCL1P1Q8NEA9 526 aa17.75■□□□□ 0.43
MKS1-210ENST00000581180 LPAR1Q92633 364 aa17.75■□□□□ 0.43
MKS1-210ENST00000581180 TMEM87BQ96K49 555 aa17.75■□□□□ 0.43
MKS1-210ENST00000581180 ZSWIM6Q9HCJ5 1215 aa17.75■□□□□ 0.43
MKS1-210ENST00000581180 GOPCQ9HD26 462 aa17.75■□□□□ 0.43
MKS1-210ENST00000581180 ZCCHC17Q9NP64 241 aaKnown RBP17.75■□□□□ 0.43
MKS1-210ENST00000581180 AGTPBP1Q9UPW5 1226 aa17.75■□□□□ 0.43
MKS1-210ENST00000581180 F5H6K3 240 aa17.74■□□□□ 0.43
MKS1-210ENST00000581180 SH2B2O14492 632 aaPredicted RBP17.74■□□□□ 0.43
MKS1-210ENST00000581180 NDUFB10O96000 172 aa17.74■□□□□ 0.43
MKS1-210ENST00000581180 VCAM1P19320 739 aa17.74■□□□□ 0.43
MKS1-210ENST00000581180 HOXA7P31268 230 aaPredicted RBP17.74■□□□□ 0.43
MKS1-210ENST00000581180 RBM25P49756 843 aaKnown RBP17.74■□□□□ 0.43
MKS1-210ENST00000581180 KLRC3Q07444 240 aa17.74■□□□□ 0.43
MKS1-210ENST00000581180 BLOC1S2Q6QNY1 142 aa17.74■□□□□ 0.43
MKS1-210ENST00000581180 JMYQ8N9B5 988 aa17.74■□□□□ 0.43
MKS1-210ENST00000581180 C22orf23Q9BZE7 217 aa17.74■□□□□ 0.43
MKS1-210ENST00000581180 SENP2Q9HC62 589 aa17.74■□□□□ 0.43
MKS1-210ENST00000581180 GPHNQ9NQX3 736 aaPredicted RBP17.74■□□□□ 0.43
MKS1-210ENST00000581180 SLC45A1Q9Y2W3 748 aa17.74■□□□□ 0.43
MKS1-210ENST00000581180 PCNTO95613 3336 aa17.74■□□□□ 0.43
MKS1-210ENST00000581180 CASTP20810 708 aaKnown RBP17.73■□□□□ 0.43
MKS1-210ENST00000581180 RPS6KB1P23443 525 aa17.73■□□□□ 0.43
MKS1-210ENST00000581180 WTAPQ15007 396 aa17.73■□□□□ 0.43
MKS1-210ENST00000581180 SART3Q15020 963 aaKnown RBP17.73■□□□□ 0.43
MKS1-210ENST00000581180 TMEM67Q5HYA8 995 aa17.73■□□□□ 0.43
MKS1-210ENST00000581180 IFIT1BQ5T764 474 aaKnown RBP17.73■□□□□ 0.43
MKS1-210ENST00000581180 SLFN13Q68D06 897 aa17.73■□□□□ 0.43
MKS1-210ENST00000581180 SPICE1Q8N0Z3 855 aa17.73■□□□□ 0.43
MKS1-210ENST00000581180 TCEANC2Q96MN5 208 aa17.73■□□□□ 0.43
MKS1-210ENST00000581180 LRRC2Q9BYS8 371 aa17.73■□□□□ 0.43
MKS1-210ENST00000581180 LY9Q9HBG7 655 aa17.73■□□□□ 0.43
MKS1-210ENST00000581180 BAZ2BQ9UIF8 2168 aaKnown RBP17.73■□□□□ 0.43
MKS1-210ENST00000581180 COL11A1P12107 1806 aaPredicted RBP17.72■□□□□ 0.43
MKS1-210ENST00000581180 ERICH2A1L162 156 aa17.72■□□□□ 0.43
MKS1-210ENST00000581180 PDHXO00330 501 aa17.72■□□□□ 0.43
MKS1-210ENST00000581180 WDR46O15213 610 aaKnown RBP17.72■□□□□ 0.43
MKS1-210ENST00000581180 LIFRP42702 1097 aa17.72■□□□□ 0.43
MKS1-210ENST00000581180 OTUD7BQ6GQQ9 843 aa17.72■□□□□ 0.43
MKS1-210ENST00000581180 RUFY3Q7L099 469 aa17.72■□□□□ 0.43
MKS1-210ENST00000581180 FBXL16Q8N461 479 aa17.72■□□□□ 0.43
MKS1-210ENST00000581180 PNMA1Q8ND90 353 aa17.72■□□□□ 0.43
MKS1-210ENST00000581180 KIF2CQ99661 725 aa17.72■□□□□ 0.43
MKS1-210ENST00000581180 SNHG28P0DPA3 235 aa17.71■□□□□ 0.43
MKS1-210ENST00000581180 MAP2K1Q02750 393 aaPredicted RBP17.71■□□□□ 0.43
MKS1-210ENST00000581180 CATSPERGQ6ZRH7 1159 aa17.71■□□□□ 0.43
MKS1-210ENST00000581180 RASGRP2Q7LDG7 609 aa17.71■□□□□ 0.43
MKS1-210ENST00000581180 GMCL1Q96IK5 515 aa17.71■□□□□ 0.43
MKS1-210ENST00000581180 AGXT2Q9BYV1 514 aa17.71■□□□□ 0.43
MKS1-210ENST00000581180 RPAP3Q9H6T3 665 aaPredicted RBP17.71■□□□□ 0.43
MKS1-210ENST00000581180 KAT14Q9H8E8 782 aa17.71■□□□□ 0.43
MKS1-210ENST00000581180 UPF2Q9HAU5 1272 aaKnown RBP17.71■□□□□ 0.43
MKS1-210ENST00000581180 WBP1LQ9NX94 342 aa17.71■□□□□ 0.43
MKS1-210ENST00000581180 USP17L15C9J2P7 530 aa17.7■□□□□ 0.42
MKS1-210ENST00000581180 USP17L13C9JLJ4 530 aa17.7■□□□□ 0.42
MKS1-210ENST00000581180 USP17L11C9JVI0 530 aa17.7■□□□□ 0.42
MKS1-210ENST00000581180 USP17L18D6R9N7 530 aa17.7■□□□□ 0.42
MKS1-210ENST00000581180 USP17L22D6RA61 530 aa17.7■□□□□ 0.42
MKS1-210ENST00000581180 USP17L17D6RBQ6 530 aa17.7■□□□□ 0.42
MKS1-210ENST00000581180 USP17L19D6RCP7 530 aa17.7■□□□□ 0.42
MKS1-210ENST00000581180 USP17L20D6RJB6 530 aa17.7■□□□□ 0.42
MKS1-210ENST00000581180 ALDH1A1P00352 501 aa17.7■□□□□ 0.42
MKS1-210ENST00000581180 PDHBP11177 359 aa17.7■□□□□ 0.42
MKS1-210ENST00000581180 USP17L24Q0WX57 530 aa17.7■□□□□ 0.42
MKS1-210ENST00000581180 PABPC4Q13310 644 aaKnown RBP eCLIP17.7■□□□□ 0.42
MKS1-210ENST00000581180 FAM83BQ5T0W9 1011 aa17.7■□□□□ 0.42
MKS1-210ENST00000581180 SGMS1Q86VZ5 419 aa17.7■□□□□ 0.42
MKS1-210ENST00000581180 TMTC2Q8N394 836 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms