RNA–Protein interactions for RNA: ENST00000581047.2

RN7SL557P-201, Transcript of RNA, 7SL, cytoplasmic 557, pseudogene, humanhuman

BASIC

Gene RN7SL557P, Length 286 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL557P-201ENST00000581047 UPF2Q9HAU5 1272 aaKnown RBP11.13□□□□□ -0.63
RN7SL557P-201ENST00000581047 GOPCQ9HD26 462 aa11.13□□□□□ -0.63
RN7SL557P-201ENST00000581047 ZCCHC17Q9NP64 241 aaKnown RBP11.13□□□□□ -0.63
RN7SL557P-201ENST00000581047 TMOD4Q9NZQ9 345 aa11.13□□□□□ -0.63
RN7SL557P-201ENST00000581047 STX8Q9UNK0 236 aa11.13□□□□□ -0.63
RN7SL557P-201ENST00000581047 ERICH2A1L162 156 aa11.12□□□□□ -0.63
RN7SL557P-201ENST00000581047 PRC1O43663 620 aa11.12□□□□□ -0.63
RN7SL557P-201ENST00000581047 TOP1P11387 765 aaKnown RBP11.12□□□□□ -0.63
RN7SL557P-201ENST00000581047 PSMA5P28066 241 aa11.12□□□□□ -0.63
RN7SL557P-201ENST00000581047 ANTXR2P58335 489 aa11.12□□□□□ -0.63
RN7SL557P-201ENST00000581047 ATP2B2Q01814 1243 aa11.12□□□□□ -0.63
RN7SL557P-201ENST00000581047 SEC23AQ15436 765 aa11.12□□□□□ -0.63
RN7SL557P-201ENST00000581047 DHX32Q7L7V1 743 aaKnown RBP11.12□□□□□ -0.63
RN7SL557P-201ENST00000581047 ANKRD23Q86SG2 305 aa11.12□□□□□ -0.63
RN7SL557P-201ENST00000581047 ENAHQ8N8S7 591 aaPredicted RBP11.12□□□□□ -0.63
RN7SL557P-201ENST00000581047 GMCL1P1Q8NEA9 526 aa11.12□□□□□ -0.63
RN7SL557P-201ENST00000581047 TMEM87BQ96K49 555 aa11.12□□□□□ -0.63
RN7SL557P-201ENST00000581047 JAKMIP1Q96N16 626 aaKnown RBP11.12□□□□□ -0.63
RN7SL557P-201ENST00000581047 ZIC5Q96T25 663 aa11.12□□□□□ -0.63
RN7SL557P-201ENST00000581047 ZKSCAN3Q9BRR0 538 aa11.12□□□□□ -0.63
RN7SL557P-201ENST00000581047 TM6SF1Q9BZW5 370 aa11.12□□□□□ -0.63
RN7SL557P-201ENST00000581047 CLIP2Q9UDT6 1046 aa11.12□□□□□ -0.63
RN7SL557P-201ENST00000581047 AGTPBP1Q9UPW5 1226 aa11.12□□□□□ -0.63
RN7SL557P-201ENST00000581047 SLC45A1Q9Y2W3 748 aa11.12□□□□□ -0.63
RN7SL557P-201ENST00000581047 WDR46O15213 610 aaKnown RBP11.11□□□□□ -0.63
RN7SL557P-201ENST00000581047 RBM25P49756 843 aaKnown RBP11.11□□□□□ -0.63
RN7SL557P-201ENST00000581047 PABPC4Q13310 644 aaKnown RBP eCLIP11.11□□□□□ -0.63
RN7SL557P-201ENST00000581047 OTUD7BQ6GQQ9 843 aa11.11□□□□□ -0.63
RN7SL557P-201ENST00000581047 BLOC1S2Q6QNY1 142 aa11.11□□□□□ -0.63
RN7SL557P-201ENST00000581047 GADL1Q6ZQY3 521 aa11.11□□□□□ -0.63
RN7SL557P-201ENST00000581047 IFNL1Q8IU54 200 aa11.11□□□□□ -0.63
RN7SL557P-201ENST00000581047 LRRC47Q8N1G4 583 aaKnown RBP11.11□□□□□ -0.63
RN7SL557P-201ENST00000581047 TMEM47Q9BQJ4 181 aa11.11□□□□□ -0.63
RN7SL557P-201ENST00000581047 EMILIN3Q9NT22 766 aa11.11□□□□□ -0.63
RN7SL557P-201ENST00000581047 MGAMO43451 1857 aa11.1□□□□□ -0.63
RN7SL557P-201ENST00000581047 BTBD19C9JJ37 291 aa11.1□□□□□ -0.63
RN7SL557P-201ENST00000581047 IGF2BP3O00425 579 aaKnown RBP eCLIP11.1□□□□□ -0.63
RN7SL557P-201ENST00000581047 SH2B2O14492 632 aaPredicted RBP11.1□□□□□ -0.63
RN7SL557P-201ENST00000581047 IFIT3O14879 490 aaKnown RBP11.1□□□□□ -0.63
RN7SL557P-201ENST00000581047 ALDH1A1P00352 501 aa11.1□□□□□ -0.63
RN7SL557P-201ENST00000581047 VCAM1P19320 739 aa11.1□□□□□ -0.63
RN7SL557P-201ENST00000581047 CASTP20810 708 aaKnown RBP11.1□□□□□ -0.63
RN7SL557P-201ENST00000581047 HOXA7P31268 230 aaPredicted RBP11.1□□□□□ -0.63
RN7SL557P-201ENST00000581047 EXOSC10Q01780 885 aaKnown RBP11.1□□□□□ -0.63
RN7SL557P-201ENST00000581047 WTAPQ15007 396 aa11.1□□□□□ -0.63
RN7SL557P-201ENST00000581047 ZYXQ15942 572 aaKnown RBP11.1□□□□□ -0.63
RN7SL557P-201ENST00000581047 TMEM67Q5HYA8 995 aa11.1□□□□□ -0.63
RN7SL557P-201ENST00000581047 IFIT1BQ5T764 474 aaKnown RBP11.1□□□□□ -0.63
RN7SL557P-201ENST00000581047 GPAT2Q6NUI2 795 aa11.1□□□□□ -0.63
RN7SL557P-201ENST00000581047 CHST3Q7LGC8 479 aa11.1□□□□□ -0.63
RN7SL557P-201ENST00000581047 TMTC2Q8N394 836 aa11.1□□□□□ -0.63
RN7SL557P-201ENST00000581047 JMYQ8N9B5 988 aa11.1□□□□□ -0.63
RN7SL557P-201ENST00000581047 IGDCC4Q8TDY8 1250 aa11.1□□□□□ -0.63
RN7SL557P-201ENST00000581047 PTPN18Q99952 460 aa11.1□□□□□ -0.63
RN7SL557P-201ENST00000581047 C22orf23Q9BZE7 217 aa11.1□□□□□ -0.63
RN7SL557P-201ENST00000581047 ZSWIM6Q9HCJ5 1215 aa11.1□□□□□ -0.63
RN7SL557P-201ENST00000581047 F5H6K3 240 aa11.09□□□□□ -0.63
RN7SL557P-201ENST00000581047 NDUFB10O96000 172 aa11.09□□□□□ -0.63
RN7SL557P-201ENST00000581047 RPS6KB1P23443 525 aa11.09□□□□□ -0.63
RN7SL557P-201ENST00000581047 LIFRP42702 1097 aa11.09□□□□□ -0.63
RN7SL557P-201ENST00000581047 MAP2K1Q02750 393 aaPredicted RBP11.09□□□□□ -0.63
RN7SL557P-201ENST00000581047 KLRC3Q07444 240 aa11.09□□□□□ -0.63
RN7SL557P-201ENST00000581047 DGKZQ13574 1117 aa11.09□□□□□ -0.63
RN7SL557P-201ENST00000581047 COL9A3Q14050 684 aaPredicted RBP11.09□□□□□ -0.63
RN7SL557P-201ENST00000581047 KIAA1755Q5JYT7 1200 aa11.09□□□□□ -0.63
RN7SL557P-201ENST00000581047 TREML2Q5T2D2 321 aa11.09□□□□□ -0.63
RN7SL557P-201ENST00000581047 RUFY3Q7L099 469 aa11.09□□□□□ -0.63
RN7SL557P-201ENST00000581047 SGMS1Q86VZ5 419 aa11.09□□□□□ -0.63
RN7SL557P-201ENST00000581047 FAM43AQ8N2R8 423 aa11.09□□□□□ -0.63
RN7SL557P-201ENST00000581047 FBXL16Q8N461 479 aa11.09□□□□□ -0.63
RN7SL557P-201ENST00000581047 PNMA1Q8ND90 353 aa11.09□□□□□ -0.63
RN7SL557P-201ENST00000581047 DCAF4Q8WV16 495 aa11.09□□□□□ -0.63
RN7SL557P-201ENST00000581047 GMCL1Q96IK5 515 aa11.09□□□□□ -0.63
RN7SL557P-201ENST00000581047 CFHR5Q9BXR6 569 aa11.09□□□□□ -0.63
RN7SL557P-201ENST00000581047 KAT14Q9H8E8 782 aa11.09□□□□□ -0.63
RN7SL557P-201ENST00000581047 LY9Q9HBG7 655 aa11.09□□□□□ -0.63
RN7SL557P-201ENST00000581047 PNMA3Q9UL41 463 aa11.09□□□□□ -0.63
RN7SL557P-201ENST00000581047 CYP46A1Q9Y6A2 500 aa11.09□□□□□ -0.63
RN7SL557P-201ENST00000581047 MYPNQ86TC9 1320 aa11.09□□□□□ -0.63
RN7SL557P-201ENST00000581047 USP17L15C9J2P7 530 aa11.08□□□□□ -0.64
RN7SL557P-201ENST00000581047 USP17L13C9JLJ4 530 aa11.08□□□□□ -0.64
RN7SL557P-201ENST00000581047 USP17L11C9JVI0 530 aa11.08□□□□□ -0.64
RN7SL557P-201ENST00000581047 USP17L18D6R9N7 530 aa11.08□□□□□ -0.64
RN7SL557P-201ENST00000581047 USP17L22D6RA61 530 aa11.08□□□□□ -0.64
RN7SL557P-201ENST00000581047 USP17L17D6RBQ6 530 aa11.08□□□□□ -0.64
RN7SL557P-201ENST00000581047 USP17L19D6RCP7 530 aa11.08□□□□□ -0.64
RN7SL557P-201ENST00000581047 USP17L20D6RJB6 530 aa11.08□□□□□ -0.64
RN7SL557P-201ENST00000581047 PDHXO00330 501 aa11.08□□□□□ -0.64
RN7SL557P-201ENST00000581047 SNHG28P0DPA3 235 aa11.08□□□□□ -0.64
RN7SL557P-201ENST00000581047 OSBPP22059 807 aa11.08□□□□□ -0.64
RN7SL557P-201ENST00000581047 USP17L24Q0WX57 530 aa11.08□□□□□ -0.64
RN7SL557P-201ENST00000581047 SLFN13Q68D06 897 aa11.08□□□□□ -0.64
RN7SL557P-201ENST00000581047 SPICE1Q8N0Z3 855 aa11.08□□□□□ -0.64
RN7SL557P-201ENST00000581047 IL27Q8NEV9 243 aa11.08□□□□□ -0.64
RN7SL557P-201ENST00000581047 TBC1D32Q96NH3 1257 aa11.08□□□□□ -0.64
RN7SL557P-201ENST00000581047 PARK7Q99497 189 aaKnown RBP11.08□□□□□ -0.64
RN7SL557P-201ENST00000581047 AGXT2Q9BYV1 514 aa11.08□□□□□ -0.64
RN7SL557P-201ENST00000581047 RPAP3Q9H6T3 665 aaPredicted RBP11.08□□□□□ -0.64
RN7SL557P-201ENST00000581047 SAGE1Q9NXZ1 904 aa11.08□□□□□ -0.64
RN7SL557P-201ENST00000581047 CA12O43570 354 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms