RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 GRB14Q14449 540 aa9.6□□□□□ -0.87
SMARCE1-217ENST00000580654 TMEM31Q5JXX7 168 aa9.6□□□□□ -0.87
SMARCE1-217ENST00000580654 RASIP1Q5U651 963 aa9.6□□□□□ -0.87
SMARCE1-217ENST00000580654 C16orf59Q7L2K0 433 aa9.6□□□□□ -0.87
SMARCE1-217ENST00000580654 ATG9AQ7Z3C6 839 aa9.6□□□□□ -0.87
SMARCE1-217ENST00000580654 CCAR1Q8IX12 1150 aaKnown RBP9.6□□□□□ -0.87
SMARCE1-217ENST00000580654 SRCIN1Q9C0H9 1055 aa9.6□□□□□ -0.87
SMARCE1-217ENST00000580654 EMILIN3Q9NT22 766 aa9.6□□□□□ -0.87
SMARCE1-217ENST00000580654 TMOD4Q9NZQ9 345 aa9.6□□□□□ -0.87
SMARCE1-217ENST00000580654 FANCIQ9NVI1 1328 aa9.59□□□□□ -0.87
SMARCE1-217ENST00000580654 C19orf81C9J6K1 198 aa9.59□□□□□ -0.87
SMARCE1-217ENST00000580654 EYA2O00167 538 aa9.59□□□□□ -0.87
SMARCE1-217ENST00000580654 SEPT4O43236 478 aa9.59□□□□□ -0.87
SMARCE1-217ENST00000580654 GPR37L1O60883 481 aa9.59□□□□□ -0.87
SMARCE1-217ENST00000580654 RAG1P15918 1043 aa9.59□□□□□ -0.87
SMARCE1-217ENST00000580654 IGFBP4P22692 258 aa9.59□□□□□ -0.87
SMARCE1-217ENST00000580654 ADGRD1Q6QNK2 874 aa9.59□□□□□ -0.87
SMARCE1-217ENST00000580654 SLC4A10Q6U841 1118 aa9.59□□□□□ -0.87
SMARCE1-217ENST00000580654 WWC1Q8IX03 1113 aa9.59□□□□□ -0.87
SMARCE1-217ENST00000580654 GTF3C2Q8WUA4 911 aaPredicted RBP9.59□□□□□ -0.87
SMARCE1-217ENST00000580654 DNAJC18Q9H819 358 aa9.59□□□□□ -0.87
SMARCE1-217ENST00000580654 BTBD7Q9P203 1132 aa9.59□□□□□ -0.87
SMARCE1-217ENST00000580654 DENND2AQ9ULE3 1009 aa9.59□□□□□ -0.87
SMARCE1-217ENST00000580654 PHF24Q9UPV7 400 aa9.59□□□□□ -0.87
SMARCE1-217ENST00000580654 RABGAP1Q9Y3P9 1069 aa9.59□□□□□ -0.87
SMARCE1-217ENST00000580654 FOCADQ5VW36 1801 aa9.59□□□□□ -0.88
SMARCE1-217ENST00000580654 FAM86C2PA6NEL3 165 aa9.58□□□□□ -0.88
SMARCE1-217ENST00000580654 USP17L10C9JJH3 530 aa9.58□□□□□ -0.88
SMARCE1-217ENST00000580654 NUDT7P0C024 238 aa9.58□□□□□ -0.88
SMARCE1-217ENST00000580654 MRE11P49959 708 aa9.58□□□□□ -0.88
SMARCE1-217ENST00000580654 FAAP100Q0VG06 881 aa9.58□□□□□ -0.88
SMARCE1-217ENST00000580654 FAM47AQ5JRC9 791 aa9.58□□□□□ -0.88
SMARCE1-217ENST00000580654 TMEM240Q5SV17 173 aa9.58□□□□□ -0.88
SMARCE1-217ENST00000580654 PRAMEF19Q5SWL8 479 aa9.58□□□□□ -0.88
SMARCE1-217ENST00000580654 WDR78Q5VTH9 848 aa9.58□□□□□ -0.88
SMARCE1-217ENST00000580654 DZIP1Q86YF9 867 aaKnown RBP9.58□□□□□ -0.88
SMARCE1-217ENST00000580654 ZNFX1Q9P2E3 1918 aaKnown RBP9.57□□□□□ -0.88
SMARCE1-217ENST00000580654 SEMA3EO15041 775 aa9.57□□□□□ -0.88
SMARCE1-217ENST00000580654 PQBP1O60828 265 aaKnown RBP9.57□□□□□ -0.88
SMARCE1-217ENST00000580654 GLRX3O76003 335 aaKnown RBP9.57□□□□□ -0.88
SMARCE1-217ENST00000580654 ASNSP08243 561 aa9.57□□□□□ -0.88
SMARCE1-217ENST00000580654 ADORA1P30542 326 aa9.57□□□□□ -0.88
SMARCE1-217ENST00000580654 MECOMQ03112 1051 aa9.57□□□□□ -0.88
SMARCE1-217ENST00000580654 EXOSC9Q06265 439 aaKnown RBP9.57□□□□□ -0.88
SMARCE1-217ENST00000580654 ATP2B3Q16720 1220 aa9.57□□□□□ -0.88
SMARCE1-217ENST00000580654 CCDC27Q2M243 656 aa9.57□□□□□ -0.88
SMARCE1-217ENST00000580654 OLFML2BQ68BL8 750 aa9.57□□□□□ -0.88
SMARCE1-217ENST00000580654 CCDC129Q6ZRS4 1044 aa9.57□□□□□ -0.88
SMARCE1-217ENST00000580654 CWC22Q9HCG8 908 aaKnown RBP9.57□□□□□ -0.88
SMARCE1-217ENST00000580654 TMEM39AQ9NV64 488 aa9.57□□□□□ -0.88
SMARCE1-217ENST00000580654 HERC5Q9UII4 1024 aaKnown RBP9.57□□□□□ -0.88
SMARCE1-217ENST00000580654 YBX2Q9Y2T7 364 aaKnown RBP9.57□□□□□ -0.88
SMARCE1-217ENST00000580654 IL16Q14005 1332 aa9.56□□□□□ -0.88
SMARCE1-217ENST00000580654 A0A0G2JMZ2 1700 aa9.56□□□□□ -0.88
SMARCE1-217ENST00000580654 A0A1W2PQ45 241 aaPredicted RBP9.56□□□□□ -0.88
SMARCE1-217ENST00000580654 A0A1W2PQY0 241 aa9.56□□□□□ -0.88
SMARCE1-217ENST00000580654 COBLO75128 1261 aa9.56□□□□□ -0.88
SMARCE1-217ENST00000580654 RGS20O76081 388 aa9.56□□□□□ -0.88
SMARCE1-217ENST00000580654 GDF11O95390 407 aa9.56□□□□□ -0.88
SMARCE1-217ENST00000580654 CCNA1P78396 465 aa9.56□□□□□ -0.88
SMARCE1-217ENST00000580654 RASGRF1Q13972 1273 aa9.56□□□□□ -0.88
SMARCE1-217ENST00000580654 ANKRD33Q7Z3H0 272 aa9.56□□□□□ -0.88
SMARCE1-217ENST00000580654 METTL16Q86W50 562 aaKnown RBP9.56□□□□□ -0.88
SMARCE1-217ENST00000580654 ZGPATQ8N5A5 531 aaKnown RBP9.56□□□□□ -0.88
SMARCE1-217ENST00000580654 SLC44A5Q8NCS7 719 aa9.56□□□□□ -0.88
SMARCE1-217ENST00000580654 C12orf42Q96LP6 360 aa9.56□□□□□ -0.88
SMARCE1-217ENST00000580654 NKX2-4Q9H2Z4 354 aa9.56□□□□□ -0.88
SMARCE1-217ENST00000580654 GNL3LQ9NVN8 582 aaKnown RBP9.56□□□□□ -0.88
SMARCE1-217ENST00000580654 ABCF2Q9UG63 623 aa9.56□□□□□ -0.88
SMARCE1-217ENST00000580654 TBX21Q9UL17 535 aa9.56□□□□□ -0.88
SMARCE1-217ENST00000580654 LHX6Q9UPM6 363 aa9.56□□□□□ -0.88
SMARCE1-217ENST00000580654 WDFY4Q6ZS81 3184 aa9.56□□□□□ -0.88
SMARCE1-217ENST00000580654 PDS5AQ29RF7 1337 aaKnown RBP9.56□□□□□ -0.88
SMARCE1-217ENST00000580654 ERC2O15083 957 aa9.55□□□□□ -0.88
SMARCE1-217ENST00000580654 TLL1O43897 1013 aa9.55□□□□□ -0.88
SMARCE1-217ENST00000580654 TIMP1P01033 207 aa9.55□□□□□ -0.88
SMARCE1-217ENST00000580654 ADORA2AP29274 412 aa9.55□□□□□ -0.88
SMARCE1-217ENST00000580654 CCDC102BQ68D86 513 aa9.55□□□□□ -0.88
SMARCE1-217ENST00000580654 MFSD5Q6N075 450 aa9.55□□□□□ -0.88
SMARCE1-217ENST00000580654 USP17L2Q6R6M4 530 aa9.55□□□□□ -0.88
SMARCE1-217ENST00000580654 LBX2Q6XYB7 198 aa9.55□□□□□ -0.88
SMARCE1-217ENST00000580654 CATSPERGQ6ZRH7 1159 aa9.55□□□□□ -0.88
SMARCE1-217ENST00000580654 SLF2Q8IX21 1173 aa9.55□□□□□ -0.88
SMARCE1-217ENST00000580654 CD320Q9NPF0 282 aa9.55□□□□□ -0.88
SMARCE1-217ENST00000580654 ZBTB21Q9ULJ3 1066 aa9.55□□□□□ -0.88
SMARCE1-217ENST00000580654 IVNS1ABPQ9Y6Y0 642 aa9.55□□□□□ -0.88
SMARCE1-217ENST00000580654 SPDYE16A6NNV3 312 aaPredicted RBP9.54□□□□□ -0.88
SMARCE1-217ENST00000580654 USP17L15C9J2P7 530 aa9.54□□□□□ -0.88
SMARCE1-217ENST00000580654 USP17L13C9JLJ4 530 aa9.54□□□□□ -0.88
SMARCE1-217ENST00000580654 USP17L11C9JVI0 530 aa9.54□□□□□ -0.88
SMARCE1-217ENST00000580654 USP17L18D6R9N7 530 aa9.54□□□□□ -0.88
SMARCE1-217ENST00000580654 USP17L22D6RA61 530 aa9.54□□□□□ -0.88
SMARCE1-217ENST00000580654 USP17L17D6RBQ6 530 aa9.54□□□□□ -0.88
SMARCE1-217ENST00000580654 USP17L19D6RCP7 530 aa9.54□□□□□ -0.88
SMARCE1-217ENST00000580654 USP17L20D6RJB6 530 aa9.54□□□□□ -0.88
SMARCE1-217ENST00000580654 PGK1P00558 417 aa9.54□□□□□ -0.88
SMARCE1-217ENST00000580654 ACRP10323 421 aa9.54□□□□□ -0.88
SMARCE1-217ENST00000580654 USP17L24Q0WX57 530 aa9.54□□□□□ -0.88
SMARCE1-217ENST00000580654 ZYXQ15942 572 aaKnown RBP9.54□□□□□ -0.88
SMARCE1-217ENST00000580654 AAK1Q2M2I8 961 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms