RNA–Protein interactions for RNA: ENST00000579539.1

DDX42-210, Transcript of DEAD-box helicase 42, humanhuman

TSL 2

Gene DDX42, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-210ENST00000579539 ZFYVE1Q9HBF4 777 aa6.97□□□□□ -1.29
DDX42-210ENST00000579539 BRMS1Q9HCU9 246 aa6.97□□□□□ -1.29
DDX42-210ENST00000579539 GABBR1Q9UBS5 961 aa6.97□□□□□ -1.29
DDX42-210ENST00000579539 PFDN2Q9UHV9 154 aa6.97□□□□□ -1.29
DDX42-210ENST00000579539 NCOA3Q9Y6Q9 1424 aa6.97□□□□□ -1.29
DDX42-210ENST00000579539 NFKBIEO00221 500 aa6.96□□□□□ -1.3
DDX42-210ENST00000579539 DLL1O00548 723 aa6.96□□□□□ -1.3
DDX42-210ENST00000579539 TPD52L2O43399 206 aaKnown RBP6.96□□□□□ -1.3
DDX42-210ENST00000579539 CILPO75339 1184 aa6.96□□□□□ -1.3
DDX42-210ENST00000579539 MBD3O95983 291 aa6.96□□□□□ -1.3
DDX42-210ENST00000579539 ZNF165P49910 485 aa6.96□□□□□ -1.3
DDX42-210ENST00000579539 CDKN1CP49918 316 aaPredicted RBP6.96□□□□□ -1.3
DDX42-210ENST00000579539 CBX1P83916 185 aa6.96□□□□□ -1.3
DDX42-210ENST00000579539 HYAL2Q12891 473 aa6.96□□□□□ -1.3
DDX42-210ENST00000579539 FXNQ16595 210 aa6.96□□□□□ -1.3
DDX42-210ENST00000579539 CWF19L2Q2TBE0 894 aaKnown RBP6.96□□□□□ -1.3
DDX42-210ENST00000579539 CAVIN1Q6NZI2 390 aaKnown RBP6.96□□□□□ -1.3
DDX42-210ENST00000579539 IGF2-ASQ6U949 168 aa6.96□□□□□ -1.3
DDX42-210ENST00000579539 GK5Q6ZS86 529 aa6.96□□□□□ -1.3
DDX42-210ENST00000579539 REXO1Q8N1G1 1221 aaKnown RBP6.96□□□□□ -1.3
DDX42-210ENST00000579539 CEP120Q8N960 986 aa6.96□□□□□ -1.3
DDX42-210ENST00000579539 RBBP8NLQ8NC74 664 aaPredicted RBP6.96□□□□□ -1.3
DDX42-210ENST00000579539 PIBF1Q8WXW3 757 aa6.96□□□□□ -1.3
DDX42-210ENST00000579539 ZNF830Q96NB3 372 aaPredicted RBP6.96□□□□□ -1.3
DDX42-210ENST00000579539 RBSNQ9H1K0 784 aa6.96□□□□□ -1.3
DDX42-210ENST00000579539 MIR1-1HGQ9H1L0 117 aa6.96□□□□□ -1.3
DDX42-210ENST00000579539 SPTLC3Q9NUV7 552 aa6.96□□□□□ -1.3
DDX42-210ENST00000579539 CGNQ9P2M7 1197 aaKnown RBP6.96□□□□□ -1.3
DDX42-210ENST00000579539 GPN3Q9UHW5 284 aaPredicted RBP6.96□□□□□ -1.3
DDX42-210ENST00000579539 USP21Q9UK80 565 aa6.96□□□□□ -1.3
DDX42-210ENST00000579539 TRIM33Q9UPN9 1127 aa6.96□□□□□ -1.3
DDX42-210ENST00000579539 CD2APQ9Y5K6 639 aa6.96□□□□□ -1.3
DDX42-210ENST00000579539 MORC2Q9Y6X9 1032 aaPredicted RBP6.96□□□□□ -1.3
DDX42-210ENST00000579539 POLA1P09884 1462 aaPredicted RBP6.96□□□□□ -1.3
DDX42-210ENST00000579539 EFCAB5A4FU69 1503 aa6.96□□□□□ -1.3
DDX42-210ENST00000579539 NPC1L1Q9UHC9 1359 aa6.95□□□□□ -1.3
DDX42-210ENST00000579539 A0A096LPE4 126 aa6.95□□□□□ -1.3
DDX42-210ENST00000579539 A0A1W2PPZ6 126 aa6.95□□□□□ -1.3
DDX42-210ENST00000579539 ASMTLO95671 621 aa6.95□□□□□ -1.3
DDX42-210ENST00000579539 POU3F3P20264 500 aaPredicted RBP6.95□□□□□ -1.3
DDX42-210ENST00000579539 CASP7P55210 303 aa6.95□□□□□ -1.3
DDX42-210ENST00000579539 NOLC1Q14978 699 aaKnown RBP eCLIP6.95□□□□□ -1.3
DDX42-210ENST00000579539 MRM1Q6IN84 353 aaKnown RBP6.95□□□□□ -1.3
DDX42-210ENST00000579539 LRSAM1Q6UWE0 723 aa6.95□□□□□ -1.3
DDX42-210ENST00000579539 KRT26Q7Z3Y9 468 aa6.95□□□□□ -1.3
DDX42-210ENST00000579539 FMNL3Q8IVF7 1028 aa6.95□□□□□ -1.3
DDX42-210ENST00000579539 PRPF38AQ8NAV1 312 aaKnown RBP6.95□□□□□ -1.3
DDX42-210ENST00000579539 ANKRD7Q92527 254 aa6.95□□□□□ -1.3
DDX42-210ENST00000579539 JARID2Q92833 1246 aaPredicted RBP6.95□□□□□ -1.3
DDX42-210ENST00000579539 GAL3ST3Q96A11 431 aa6.95□□□□□ -1.3
DDX42-210ENST00000579539 SSBP4Q9BWG4 385 aaPredicted RBP6.95□□□□□ -1.3
DDX42-210ENST00000579539 THRAP3Q9Y2W1 955 aaKnown RBP6.95□□□□□ -1.3
DDX42-210ENST00000579539 FGD5Q6ZNL6 1462 aa6.95□□□□□ -1.3
DDX42-210ENST00000579539 CFAP43Q8NDM7 1665 aa6.95□□□□□ -1.3
DDX42-210ENST00000579539 ZNF521Q96K83 1311 aa6.95□□□□□ -1.3
DDX42-210ENST00000579539 CARMIL1Q5VZK9 1371 aa6.95□□□□□ -1.3
DDX42-210ENST00000579539 HECW1Q76N89 1606 aa6.94□□□□□ -1.3
DDX42-210ENST00000579539 TCOF1Q13428 1488 aaKnown RBP6.94□□□□□ -1.3
DDX42-210ENST00000579539 GAPVD1Q14C86 1478 aa6.94□□□□□ -1.3
DDX42-210ENST00000579539 CTIFO43310 598 aaKnown RBP6.94□□□□□ -1.3
DDX42-210ENST00000579539 DYRK3O43781 588 aa6.94□□□□□ -1.3
DDX42-210ENST00000579539 PEX14O75381 377 aa6.94□□□□□ -1.3
DDX42-210ENST00000579539 CT47B1P0C2W7 299 aaPredicted RBP6.94□□□□□ -1.3
DDX42-210ENST00000579539 KCNJ4P48050 445 aa6.94□□□□□ -1.3
DDX42-210ENST00000579539 ATP11AP98196 1134 aa6.94□□□□□ -1.3
DDX42-210ENST00000579539 SETDB1Q15047 1291 aa6.94□□□□□ -1.3
DDX42-210ENST00000579539 WDR43Q15061 677 aaKnown RBP eCLIP6.94□□□□□ -1.3
DDX42-210ENST00000579539 TCEA2Q15560 299 aa6.94□□□□□ -1.3
DDX42-210ENST00000579539 RPS26P11Q5JNZ5 115 aaPredicted RBP6.94□□□□□ -1.3
DDX42-210ENST00000579539 ADAMTSL4Q6UY14 1074 aa6.94□□□□□ -1.3
DDX42-210ENST00000579539 RUFY4Q6ZNE9 571 aa6.94□□□□□ -1.3
DDX42-210ENST00000579539 RPAINQ86UA6 219 aa6.94□□□□□ -1.3
DDX42-210ENST00000579539 FERMT3Q86UX7 667 aa6.94□□□□□ -1.3
DDX42-210ENST00000579539 JAMLQ86YT9 394 aa6.94□□□□□ -1.3
DDX42-210ENST00000579539 WFDC12Q8WWY7 111 aa6.94□□□□□ -1.3
DDX42-210ENST00000579539 ZMYM5Q9UJ78 669 aa6.94□□□□□ -1.3
DDX42-210ENST00000579539 PAXBP1Q9Y5B6 917 aa6.94□□□□□ -1.3
DDX42-210ENST00000579539 YEATS2Q9ULM3 1422 aa6.93□□□□□ -1.3
DDX42-210ENST00000579539 GOLGA6L6A8MZA4 724 aa6.93□□□□□ -1.3
DDX42-210ENST00000579539 UPK3BL1B0FP48 263 aa6.93□□□□□ -1.3
DDX42-210ENST00000579539 UPK3BL2E5RIL1 263 aa6.93□□□□□ -1.3
DDX42-210ENST00000579539 KCNQ2O43526 872 aa6.93□□□□□ -1.3
DDX42-210ENST00000579539 IGHDP01880 384 aa6.93□□□□□ -1.3
DDX42-210ENST00000579539 IMPDH2P12268 514 aa6.93□□□□□ -1.3
DDX42-210ENST00000579539 BMP6P22004 513 aa6.93□□□□□ -1.3
DDX42-210ENST00000579539 NOS3P29474 1203 aa6.93□□□□□ -1.3
DDX42-210ENST00000579539 TNNT3P45378 269 aaPredicted RBP6.93□□□□□ -1.3
DDX42-210ENST00000579539 IREB2P48200 963 aaKnown RBP6.93□□□□□ -1.3
DDX42-210ENST00000579539 ZNF157P51786 506 aaPredicted RBP6.93□□□□□ -1.3
DDX42-210ENST00000579539 TBX4P57082 545 aa6.93□□□□□ -1.3
DDX42-210ENST00000579539 EVA1CP58658 441 aa6.93□□□□□ -1.3
DDX42-210ENST00000579539 SSRP1Q08945 709 aaKnown RBP6.93□□□□□ -1.3
DDX42-210ENST00000579539 C20orf194Q5TEA3 1177 aa6.93□□□□□ -1.3
DDX42-210ENST00000579539 C6orf15Q6UXA7 325 aaPredicted RBP6.93□□□□□ -1.3
DDX42-210ENST00000579539 EXOC8Q8IYI6 725 aa6.93□□□□□ -1.3
DDX42-210ENST00000579539 TMEM102Q8N9M5 508 aaPredicted RBP6.93□□□□□ -1.3
DDX42-210ENST00000579539 NXPE3Q969Y0 559 aa6.93□□□□□ -1.3
DDX42-210ENST00000579539 SGSM3Q96HU1 749 aa6.93□□□□□ -1.3
DDX42-210ENST00000579539 PSMD1Q99460 953 aa6.93□□□□□ -1.3
DDX42-210ENST00000579539 CARD11Q9BXL7 1154 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms