RNA–Protein interactions for RNA: ENST00000578078.1

KRT39-203, Transcript of keratin 39, humanhuman

TSL 1 (best)

Gene KRT39, Length 1,689 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39-203ENST00000578078 KLHDC4Q8TBB5 520 aa7.91□□□□□ -1.14
KRT39-203ENST00000578078 RNF217Q8TC41 542 aa7.91□□□□□ -1.14
KRT39-203ENST00000578078 CACTINQ8WUQ7 758 aaKnown RBP7.91□□□□□ -1.14
KRT39-203ENST00000578078 SYTL4Q96C24 671 aaPredicted RBP7.91□□□□□ -1.14
KRT39-203ENST00000578078 SGSM3Q96HU1 749 aa7.91□□□□□ -1.14
KRT39-203ENST00000578078 HINFPQ9BQA5 517 aa7.91□□□□□ -1.14
KRT39-203ENST00000578078 TRIM5Q9C035 493 aa7.91□□□□□ -1.14
KRT39-203ENST00000578078 CCDC8Q9H0W5 538 aaPredicted RBP7.91□□□□□ -1.14
KRT39-203ENST00000578078 OSBPL5Q9H0X9 879 aaPredicted RBP7.91□□□□□ -1.14
KRT39-203ENST00000578078 CICQ96RK0 1608 aaPredicted RBP7.91□□□□□ -1.14
KRT39-203ENST00000578078 SPATA31A1Q5TZJ5 1347 aa7.9□□□□□ -1.14
KRT39-203ENST00000578078 GOLGA6L9A6NEM1 432 aa7.9□□□□□ -1.14
KRT39-203ENST00000578078 H0YHG0 523 aa7.9□□□□□ -1.14
KRT39-203ENST00000578078 GADD45BO75293 160 aaPredicted RBP7.9□□□□□ -1.14
KRT39-203ENST00000578078 PEX14O75381 377 aa7.9□□□□□ -1.14
KRT39-203ENST00000578078 IGHA2P01877 340 aa7.9□□□□□ -1.14
KRT39-203ENST00000578078 FGRP09769 529 aa7.9□□□□□ -1.14
KRT39-203ENST00000578078 HSPA4P34932 840 aa7.9□□□□□ -1.14
KRT39-203ENST00000578078 SARNPP82979 210 aaKnown RBP7.9□□□□□ -1.14
KRT39-203ENST00000578078 FOXO4P98177 505 aa7.9□□□□□ -1.14
KRT39-203ENST00000578078 TYRO3Q06418 890 aa7.9□□□□□ -1.14
KRT39-203ENST00000578078 TCIRG1Q13488 830 aa7.9□□□□□ -1.14
KRT39-203ENST00000578078 SNW1Q13573 536 aaKnown RBP7.9□□□□□ -1.14
KRT39-203ENST00000578078 TUBB2AQ13885 445 aa7.9□□□□□ -1.14
KRT39-203ENST00000578078 NAA30Q147X3 362 aaPredicted RBP7.9□□□□□ -1.14
KRT39-203ENST00000578078 CRYMQ14894 314 aa7.9□□□□□ -1.14
KRT39-203ENST00000578078 DDB1Q16531 1140 aa7.9□□□□□ -1.14
KRT39-203ENST00000578078 ERCC6LQ2NKX8 1250 aa7.9□□□□□ -1.14
KRT39-203ENST00000578078 TNNI3KQ59H18 835 aa7.9□□□□□ -1.14
KRT39-203ENST00000578078 CWC27Q6UX04 472 aaKnown RBP7.9□□□□□ -1.14
KRT39-203ENST00000578078 SPATS2Q86XZ4 545 aaKnown RBP7.9□□□□□ -1.14
KRT39-203ENST00000578078 ZNF654Q8IZM8 581 aa7.9□□□□□ -1.14
KRT39-203ENST00000578078 SPC24Q8NBT2 197 aa7.9□□□□□ -1.14
KRT39-203ENST00000578078 RABGGTAQ92696 567 aa7.9□□□□□ -1.14
KRT39-203ENST00000578078 ZBTB9Q96C00 473 aa7.9□□□□□ -1.14
KRT39-203ENST00000578078 PURBQ96QR8 312 aaKnown RBP7.9□□□□□ -1.14
KRT39-203ENST00000578078 OCSTAMPQ9BR26 566 aa7.9□□□□□ -1.14
KRT39-203ENST00000578078 ISCA1Q9BUE6 129 aa7.9□□□□□ -1.14
KRT39-203ENST00000578078 TUBB2BQ9BVA1 445 aa7.9□□□□□ -1.14
KRT39-203ENST00000578078 NUP62CLQ9H1M0 184 aa7.9□□□□□ -1.14
KRT39-203ENST00000578078 DOLKQ9UPQ8 538 aa7.9□□□□□ -1.14
KRT39-203ENST00000578078 FPGT-TNNI3KV9GXZ4 949 aa7.9□□□□□ -1.14
KRT39-203ENST00000578078 SPEF2Q9C093 1822 aa7.9□□□□□ -1.15
KRT39-203ENST00000578078 ENPP3O14638 875 aa7.89□□□□□ -1.15
KRT39-203ENST00000578078 TADA3O75528 432 aa7.89□□□□□ -1.15
KRT39-203ENST00000578078 SKILP12757 684 aa7.89□□□□□ -1.15
KRT39-203ENST00000578078 IL15P40933 162 aaPredicted RBP7.89□□□□□ -1.15
KRT39-203ENST00000578078 LMAN1P49257 510 aa7.89□□□□□ -1.15
KRT39-203ENST00000578078 MRPL12P52815 198 aaKnown RBP7.89□□□□□ -1.15
KRT39-203ENST00000578078 ST5P78524 1137 aa7.89□□□□□ -1.15
KRT39-203ENST00000578078 ATP2B2Q01814 1243 aa7.89□□□□□ -1.15
KRT39-203ENST00000578078 PTK2Q05397 1052 aa7.89□□□□□ -1.15
KRT39-203ENST00000578078 TFCP2Q12800 502 aa7.89□□□□□ -1.15
KRT39-203ENST00000578078 TRIM28Q13263 835 aaKnown RBP7.89□□□□□ -1.15
KRT39-203ENST00000578078 MAP9Q49MG5 647 aa7.89□□□□□ -1.15
KRT39-203ENST00000578078 VPS37DQ86XT2 251 aa7.89□□□□□ -1.15
KRT39-203ENST00000578078 DRC7Q8IY82 874 aa7.89□□□□□ -1.15
KRT39-203ENST00000578078 MICALL1Q8N3F8 863 aa7.89□□□□□ -1.15
KRT39-203ENST00000578078 FSD1Q9BTV5 496 aa7.89□□□□□ -1.15
KRT39-203ENST00000578078 IRF2BPLQ9H1B7 796 aa7.89□□□□□ -1.15
KRT39-203ENST00000578078 TMX1Q9H3N1 280 aa7.89□□□□□ -1.15
KRT39-203ENST00000578078 CYLDQ9NQC7 956 aa7.89□□□□□ -1.15
KRT39-203ENST00000578078 TOMM22Q9NS69 142 aa7.89□□□□□ -1.15
KRT39-203ENST00000578078 GNL3LQ9NVN8 582 aaKnown RBP7.89□□□□□ -1.15
KRT39-203ENST00000578078 TLR7Q9NYK1 1049 aaKnown RBP7.89□□□□□ -1.15
KRT39-203ENST00000578078 WWC3Q9ULE0 1092 aa7.89□□□□□ -1.15
KRT39-203ENST00000578078 SH3BP1Q9Y3L3 701 aa7.89□□□□□ -1.15
KRT39-203ENST00000578078 MRVI1Q9Y6F6 885 aa7.89□□□□□ -1.15
KRT39-203ENST00000578078 RREB1Q92766 1687 aa7.89□□□□□ -1.15
KRT39-203ENST00000578078 RFX7Q2KHR2 1363 aa7.89□□□□□ -1.15
KRT39-203ENST00000578078 MAP3K15Q6ZN16 1313 aa7.89□□□□□ -1.15
KRT39-203ENST00000578078 F13A1P00488 732 aa7.89□□□□□ -1.15
KRT39-203ENST00000578078 ATP5JP18859 108 aa7.89□□□□□ -1.15
KRT39-203ENST00000578078 MPSTP25325 297 aa7.89□□□□□ -1.15
KRT39-203ENST00000578078 ETF1P62495 437 aaKnown RBP7.89□□□□□ -1.15
KRT39-203ENST00000578078 RACK1P63244 317 aaKnown RBP7.89□□□□□ -1.15
KRT39-203ENST00000578078 PIP4K2BP78356 416 aa7.89□□□□□ -1.15
KRT39-203ENST00000578078 CCZ1BP86790 482 aa7.89□□□□□ -1.15
KRT39-203ENST00000578078 CCZ1P86791 482 aaPredicted RBP7.89□□□□□ -1.15
KRT39-203ENST00000578078 PLEKHG6Q3KR16 790 aa7.89□□□□□ -1.15
KRT39-203ENST00000578078 ANKRD18AQ8IVF6 992 aa7.89□□□□□ -1.15
KRT39-203ENST00000578078 GIMAP7Q8NHV1 300 aa7.89□□□□□ -1.15
KRT39-203ENST00000578078 FAM71BQ8TC56 605 aa7.89□□□□□ -1.15
KRT39-203ENST00000578078 MIEF2Q96C03 454 aa7.89□□□□□ -1.15
KRT39-203ENST00000578078 MPHOSPH8Q99549 860 aa7.89□□□□□ -1.15
KRT39-203ENST00000578078 PAIP2Q9BPZ3 127 aaKnown RBP7.89□□□□□ -1.15
KRT39-203ENST00000578078 FUT8Q9BYC5 575 aa7.89□□□□□ -1.15
KRT39-203ENST00000578078 LSG1Q9H089 658 aaKnown RBP7.89□□□□□ -1.15
KRT39-203ENST00000578078 MAP10Q9P2G4 905 aa7.89□□□□□ -1.15
KRT39-203ENST00000578078 PALD1Q9ULE6 856 aa7.89□□□□□ -1.15
KRT39-203ENST00000578078 SLIT2O94813 1529 aa7.89□□□□□ -1.15
KRT39-203ENST00000578078 SPATA31A5Q5VU36 1347 aa7.88□□□□□ -1.15
KRT39-203ENST00000578078 SPATA31A7Q8IWB4 1347 aa7.88□□□□□ -1.15
KRT39-203ENST00000578078 CIAO1O76071 339 aa7.88□□□□□ -1.15
KRT39-203ENST00000578078 ERLIN2O94905 339 aa7.88□□□□□ -1.15
KRT39-203ENST00000578078 PCCAP05165 728 aaPredicted RBP7.88□□□□□ -1.15
KRT39-203ENST00000578078 CYP19A1P11511 503 aaPredicted RBP7.88□□□□□ -1.15
KRT39-203ENST00000578078 USP5P45974 858 aa7.88□□□□□ -1.15
KRT39-203ENST00000578078 LRMPQ12912 555 aa7.88□□□□□ -1.15
KRT39-203ENST00000578078 ZNF394Q53GI3 561 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms