RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 EMILIN3Q9NT22 766 aa16.45■□□□□ 0.22
RPAIN-217ENST00000575711 TNKSO95271 1327 aa16.45■□□□□ 0.22
RPAIN-217ENST00000575711 BTBD19C9JJ37 291 aa16.44■□□□□ 0.22
RPAIN-217ENST00000575711 IFIT3O14879 490 aaKnown RBP16.44■□□□□ 0.22
RPAIN-217ENST00000575711 RAD21O60216 631 aa16.44■□□□□ 0.22
RPAIN-217ENST00000575711 TOP1P11387 765 aaKnown RBP16.44■□□□□ 0.22
RPAIN-217ENST00000575711 PSMA5P28066 241 aa16.44■□□□□ 0.22
RPAIN-217ENST00000575711 MAP2K1Q02750 393 aaPredicted RBP16.44■□□□□ 0.22
RPAIN-217ENST00000575711 DGKZQ13574 1117 aa16.44■□□□□ 0.22
RPAIN-217ENST00000575711 MOGSQ13724 837 aa16.44■□□□□ 0.22
RPAIN-217ENST00000575711 ANKRD23Q86SG2 305 aa16.44■□□□□ 0.22
RPAIN-217ENST00000575711 IFNL1Q8IU54 200 aa16.44■□□□□ 0.22
RPAIN-217ENST00000575711 LRRC47Q8N1G4 583 aaKnown RBP16.44■□□□□ 0.22
RPAIN-217ENST00000575711 LPAR1Q92633 364 aa16.44■□□□□ 0.22
RPAIN-217ENST00000575711 JAKMIP1Q96N16 626 aaKnown RBP16.44■□□□□ 0.22
RPAIN-217ENST00000575711 PTPN18Q99952 460 aa16.44■□□□□ 0.22
RPAIN-217ENST00000575711 AGTPBP1Q9UPW5 1226 aa16.44■□□□□ 0.22
RPAIN-217ENST00000575711 IGF2BP3O00425 579 aaKnown RBP eCLIP16.43■□□□□ 0.22
RPAIN-217ENST00000575711 PRC1O43663 620 aa16.43■□□□□ 0.22
RPAIN-217ENST00000575711 ALDH1A1P00352 501 aa16.43■□□□□ 0.22
RPAIN-217ENST00000575711 ANAPC15P60006 121 aa16.43■□□□□ 0.22
RPAIN-217ENST00000575711 PABPC4Q13310 644 aaKnown RBP eCLIP16.43■□□□□ 0.22
RPAIN-217ENST00000575711 CHST3Q7LGC8 479 aa16.43■□□□□ 0.22
RPAIN-217ENST00000575711 ENAHQ8N8S7 591 aaPredicted RBP16.43■□□□□ 0.22
RPAIN-217ENST00000575711 TMEM47Q9BQJ4 181 aa16.43■□□□□ 0.22
RPAIN-217ENST00000575711 MTA3Q9BTC8 594 aa16.43■□□□□ 0.22
RPAIN-217ENST00000575711 ZCCHC17Q9NP64 241 aaKnown RBP16.43■□□□□ 0.22
RPAIN-217ENST00000575711 F5H6K3 240 aa16.42■□□□□ 0.22
RPAIN-217ENST00000575711 PDHXO00330 501 aa16.42■□□□□ 0.22
RPAIN-217ENST00000575711 VCAM1P19320 739 aa16.42■□□□□ 0.22
RPAIN-217ENST00000575711 ANTXR2P58335 489 aa16.42■□□□□ 0.22
RPAIN-217ENST00000575711 KLRC3Q07444 240 aa16.42■□□□□ 0.22
RPAIN-217ENST00000575711 WTAPQ15007 396 aa16.42■□□□□ 0.22
RPAIN-217ENST00000575711 TMEM67Q5HYA8 995 aa16.42■□□□□ 0.22
RPAIN-217ENST00000575711 TREML2Q5T2D2 321 aa16.42■□□□□ 0.22
RPAIN-217ENST00000575711 IFIT1BQ5T764 474 aaKnown RBP16.42■□□□□ 0.22
RPAIN-217ENST00000575711 RCSD1Q6JBY9 416 aa16.42■□□□□ 0.22
RPAIN-217ENST00000575711 GPAT2Q6NUI2 795 aa16.42■□□□□ 0.22
RPAIN-217ENST00000575711 BLOC1S2Q6QNY1 142 aa16.42■□□□□ 0.22
RPAIN-217ENST00000575711 DHX32Q7L7V1 743 aaKnown RBP16.42■□□□□ 0.22
RPAIN-217ENST00000575711 SPICE1Q8N0Z3 855 aa16.42■□□□□ 0.22
RPAIN-217ENST00000575711 FAM43AQ8N2R8 423 aa16.42■□□□□ 0.22
RPAIN-217ENST00000575711 GMCL1P1Q8NEA9 526 aa16.42■□□□□ 0.22
RPAIN-217ENST00000575711 ANKS1AQ92625 1134 aa16.42■□□□□ 0.22
RPAIN-217ENST00000575711 TMEM87BQ96K49 555 aa16.42■□□□□ 0.22
RPAIN-217ENST00000575711 BEGAINQ9BUH8 593 aa16.42■□□□□ 0.22
RPAIN-217ENST00000575711 KAT14Q9H8E8 782 aa16.42■□□□□ 0.22
RPAIN-217ENST00000575711 SLC45A1Q9Y2W3 748 aa16.42■□□□□ 0.22
RPAIN-217ENST00000575711 WDR19Q8NEZ3 1342 aa16.42■□□□□ 0.22
RPAIN-217ENST00000575711 WDR46O15213 610 aaKnown RBP16.41■□□□□ 0.22
RPAIN-217ENST00000575711 NDUFB10O96000 172 aa16.41■□□□□ 0.22
RPAIN-217ENST00000575711 CASTP20810 708 aaKnown RBP16.41■□□□□ 0.22
RPAIN-217ENST00000575711 SEC23AQ15436 765 aa16.41■□□□□ 0.22
RPAIN-217ENST00000575711 SLFN13Q68D06 897 aa16.41■□□□□ 0.22
RPAIN-217ENST00000575711 JMYQ8N9B5 988 aa16.41■□□□□ 0.22
RPAIN-217ENST00000575711 BACH2Q9BYV9 841 aa16.41■□□□□ 0.22
RPAIN-217ENST00000575711 PNMA3Q9UL41 463 aa16.41■□□□□ 0.22
RPAIN-217ENST00000575711 USP17L15C9J2P7 530 aa16.4■□□□□ 0.22
RPAIN-217ENST00000575711 USP17L13C9JLJ4 530 aa16.4■□□□□ 0.22
RPAIN-217ENST00000575711 USP17L11C9JVI0 530 aa16.4■□□□□ 0.22
RPAIN-217ENST00000575711 USP17L18D6R9N7 530 aa16.4■□□□□ 0.22
RPAIN-217ENST00000575711 USP17L22D6RA61 530 aa16.4■□□□□ 0.22
RPAIN-217ENST00000575711 USP17L17D6RBQ6 530 aa16.4■□□□□ 0.22
RPAIN-217ENST00000575711 USP17L19D6RCP7 530 aa16.4■□□□□ 0.22
RPAIN-217ENST00000575711 USP17L20D6RJB6 530 aa16.4■□□□□ 0.22
RPAIN-217ENST00000575711 OSBPP22059 807 aa16.4■□□□□ 0.22
RPAIN-217ENST00000575711 HOXA7P31268 230 aaPredicted RBP16.4■□□□□ 0.22
RPAIN-217ENST00000575711 USP17L24Q0WX57 530 aa16.4■□□□□ 0.22
RPAIN-217ENST00000575711 KIAA1755Q5JYT7 1200 aa16.4■□□□□ 0.22
RPAIN-217ENST00000575711 IGDCC4Q8TDY8 1250 aa16.4■□□□□ 0.22
RPAIN-217ENST00000575711 PARK7Q99497 189 aaKnown RBP16.4■□□□□ 0.22
RPAIN-217ENST00000575711 C22orf23Q9BZE7 217 aa16.4■□□□□ 0.22
RPAIN-217ENST00000575711 TM6SF1Q9BZW5 370 aa16.4■□□□□ 0.22
RPAIN-217ENST00000575711 RPAP3Q9H6T3 665 aaPredicted RBP16.4■□□□□ 0.22
RPAIN-217ENST00000575711 MTMR7Q9Y216 660 aa16.4■□□□□ 0.22
RPAIN-217ENST00000575711 PTPRFP10586 1907 aa16.4■□□□□ 0.22
RPAIN-217ENST00000575711 LOC285556D6RIA3 1793 aa16.4■□□□□ 0.22
RPAIN-217ENST00000575711 SH2B2O14492 632 aaPredicted RBP16.39■□□□□ 0.21
RPAIN-217ENST00000575711 RPS6KB1P23443 525 aa16.39■□□□□ 0.21
RPAIN-217ENST00000575711 IRX3P78415 501 aaPredicted RBP16.39■□□□□ 0.21
RPAIN-217ENST00000575711 FGD1P98174 961 aa16.39■□□□□ 0.21
RPAIN-217ENST00000575711 EXOSC10Q01780 885 aaKnown RBP16.39■□□□□ 0.21
RPAIN-217ENST00000575711 COL9A3Q14050 684 aaPredicted RBP16.39■□□□□ 0.21
RPAIN-217ENST00000575711 TAF1CQ15572 869 aaPredicted RBP16.39■□□□□ 0.21
RPAIN-217ENST00000575711 PPP4R3CPQ6ZMV5 832 aa16.39■□□□□ 0.21
RPAIN-217ENST00000575711 RUFY3Q7L099 469 aa16.39■□□□□ 0.21
RPAIN-217ENST00000575711 TMTC2Q8N394 836 aa16.39■□□□□ 0.21
RPAIN-217ENST00000575711 PNMA1Q8ND90 353 aa16.39■□□□□ 0.21
RPAIN-217ENST00000575711 GMCL1Q96IK5 515 aa16.39■□□□□ 0.21
RPAIN-217ENST00000575711 LRRC2Q9BYS8 371 aa16.39■□□□□ 0.21
RPAIN-217ENST00000575711 TANGO6Q9C0B7 1094 aa16.39■□□□□ 0.21
RPAIN-217ENST00000575711 ZSWIM6Q9HCJ5 1215 aa16.39■□□□□ 0.21
RPAIN-217ENST00000575711 RNF186Q9NXI6 227 aa16.39■□□□□ 0.21
RPAIN-217ENST00000575711 ISY1Q9ULR0 285 aaKnown RBP16.39■□□□□ 0.21
RPAIN-217ENST00000575711 CYP46A1Q9Y6A2 500 aa16.39■□□□□ 0.21
RPAIN-217ENST00000575711 CA12O43570 354 aa16.38■□□□□ 0.21
RPAIN-217ENST00000575711 TRPA1O75762 1119 aa16.38■□□□□ 0.21
RPAIN-217ENST00000575711 CPA1P15085 419 aa16.38■□□□□ 0.21
RPAIN-217ENST00000575711 LIFRP42702 1097 aa16.38■□□□□ 0.21
RPAIN-217ENST00000575711 SLC1A4P43007 532 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms