RNA–Protein interactions for RNA: ENST00000574435.1

XPO6-223, Transcript of exportin 6, human

TSL 5

Gene XPO6, Length 765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
XPO6-223	ENST00000574435	PNMA1	Q8ND90	353 aa		18.86	■□□□□ 0.61
XPO6-223	ENST00000574435	UPF3B	Q9BZI7	483 aa	Known RBP	18.86	■□□□□ 0.61
XPO6-223	ENST00000574435	VCPKMT	Q9H867	229 aa		18.86	■□□□□ 0.61
XPO6-223	ENST00000574435	TMOD4	Q9NZQ9	345 aa		18.86	■□□□□ 0.61
XPO6-223	ENST00000574435	FZD1	Q9UP38	647 aa		18.86	■□□□□ 0.61
XPO6-223	ENST00000574435		A0A0G2JLL6	359 aa	Predicted RBP	18.85	■□□□□ 0.61
XPO6-223	ENST00000574435	ZNF157	P51786	506 aa	Predicted RBP	18.85	■□□□□ 0.61
XPO6-223	ENST00000574435	INHBE	P58166	350 aa		18.85	■□□□□ 0.61
XPO6-223	ENST00000574435	PABPC4	Q13310	644 aa	Known RBP eCLIP	18.85	■□□□□ 0.61
XPO6-223	ENST00000574435	SPRYD7	Q5W111	196 aa		18.85	■□□□□ 0.61
XPO6-223	ENST00000574435	NFXL1	Q6ZNB6	911 aa		18.85	■□□□□ 0.61
XPO6-223	ENST00000574435		Q6ZUG5	572 aa		18.85	■□□□□ 0.61
XPO6-223	ENST00000574435	MOB2	Q70IA6	237 aa		18.85	■□□□□ 0.61
XPO6-223	ENST00000574435	PRRT2	Q7Z6L0	340 aa	Predicted RBP	18.85	■□□□□ 0.61
XPO6-223	ENST00000574435	RASAL3	Q86YV0	1011 aa		18.85	■□□□□ 0.61
XPO6-223	ENST00000574435	DCAF4	Q8WV16	495 aa		18.85	■□□□□ 0.61
XPO6-223	ENST00000574435	OTUD5	Q96G74	571 aa		18.85	■□□□□ 0.61
XPO6-223	ENST00000574435	GMCL1	Q96IK5	515 aa		18.85	■□□□□ 0.61
XPO6-223	ENST00000574435	CLMN	Q96JQ2	1002 aa		18.85	■□□□□ 0.61
XPO6-223	ENST00000574435	TMEM47	Q9BQJ4	181 aa		18.85	■□□□□ 0.61
XPO6-223	ENST00000574435	ZCCHC17	Q9NP64	241 aa	Known RBP	18.85	■□□□□ 0.61
XPO6-223	ENST00000574435	CLIP2	Q9UDT6	1046 aa		18.85	■□□□□ 0.61
XPO6-223	ENST00000574435	SLC12A7	Q9Y666	1083 aa		18.85	■□□□□ 0.61
XPO6-223	ENST00000574435	PARP14	Q460N5	1801 aa		18.84	■□□□□ 0.61
XPO6-223	ENST00000574435	CCDC196	A0A1B0GTZ2	297 aa		18.84	■□□□□ 0.61
XPO6-223	ENST00000574435	MANSC4	A6NHS7	340 aa	Predicted RBP	18.84	■□□□□ 0.61
XPO6-223	ENST00000574435	WDR46	O15213	610 aa	Known RBP	18.84	■□□□□ 0.61
XPO6-223	ENST00000574435	KIF5B	P33176	963 aa		18.84	■□□□□ 0.61
XPO6-223	ENST00000574435	GPATCH4	Q5T3I0	446 aa	Known RBP	18.84	■□□□□ 0.61
XPO6-223	ENST00000574435	ZKSCAN3	Q9BRR0	538 aa		18.84	■□□□□ 0.61
XPO6-223	ENST00000574435	IRF6	O14896	467 aa		18.83	■□□□□ 0.6
XPO6-223	ENST00000574435	NMT2	O60551	498 aa		18.83	■□□□□ 0.6
XPO6-223	ENST00000574435	CETP	P11597	493 aa		18.83	■□□□□ 0.6
XPO6-223	ENST00000574435	GNAQ	P50148	359 aa		18.83	■□□□□ 0.6
XPO6-223	ENST00000574435	JAG1	P78504	1218 aa		18.83	■□□□□ 0.6
XPO6-223	ENST00000574435	ATP2B2	Q01814	1243 aa		18.83	■□□□□ 0.6
XPO6-223	ENST00000574435	SREBF2	Q12772	1141 aa		18.83	■□□□□ 0.6
XPO6-223	ENST00000574435	SPP2	Q13103	211 aa		18.83	■□□□□ 0.6
XPO6-223	ENST00000574435	NOG	Q13253	232 aa		18.83	■□□□□ 0.6
XPO6-223	ENST00000574435	ASPRV1	Q53RT3	343 aa		18.83	■□□□□ 0.6
XPO6-223	ENST00000574435	ZNF654	Q8IZM8	581 aa		18.83	■□□□□ 0.6
XPO6-223	ENST00000574435	ZNF274	Q96GC6	653 aa	Predicted RBP	18.83	■□□□□ 0.6
XPO6-223	ENST00000574435	ZSCAN31	Q96LW9	406 aa	Predicted RBP	18.83	■□□□□ 0.6
XPO6-223	ENST00000574435	SH2B1	Q9NRF2	756 aa	Predicted RBP	18.83	■□□□□ 0.6
XPO6-223	ENST00000574435	RBM28	Q9NW13	759 aa	Known RBP	18.83	■□□□□ 0.6
XPO6-223	ENST00000574435	SLC45A1	Q9Y2W3	748 aa		18.83	■□□□□ 0.6
XPO6-223	ENST00000574435	TRIM75P	A6NK02	468 aa		18.82	■□□□□ 0.6
XPO6-223	ENST00000574435	PLA2G6	O60733	806 aa		18.82	■□□□□ 0.6
XPO6-223	ENST00000574435	SNHG28	P0DPA3	235 aa		18.82	■□□□□ 0.6
XPO6-223	ENST00000574435	C1QTNF8	P60827	252 aa		18.82	■□□□□ 0.6
XPO6-223	ENST00000574435	MTMR2	Q13614	643 aa		18.82	■□□□□ 0.6
XPO6-223	ENST00000574435	DEFB115	Q30KQ5	88 aa		18.82	■□□□□ 0.6
XPO6-223	ENST00000574435	APOA5	Q6Q788	366 aa		18.82	■□□□□ 0.6
XPO6-223	ENST00000574435	CHST3	Q7LGC8	479 aa		18.82	■□□□□ 0.6
XPO6-223	ENST00000574435	BRF1	Q92994	677 aa		18.82	■□□□□ 0.6
XPO6-223	ENST00000574435	MYPN	Q86TC9	1320 aa		18.81	■□□□□ 0.6
XPO6-223	ENST00000574435	ZBTB43	O43298	467 aa		18.81	■□□□□ 0.6
XPO6-223	ENST00000574435	DHX16	O60231	1041 aa	Known RBP	18.81	■□□□□ 0.6
XPO6-223	ENST00000574435	HSPA6	P17066	643 aa		18.81	■□□□□ 0.6
XPO6-223	ENST00000574435	TOB2	Q14106	344 aa	Predicted RBP	18.81	■□□□□ 0.6
XPO6-223	ENST00000574435	SHROOM1	Q2M3G4	852 aa	Predicted RBP	18.81	■□□□□ 0.6
XPO6-223	ENST00000574435	SIAH1	Q8IUQ4	282 aa		18.81	■□□□□ 0.6
XPO6-223	ENST00000574435	CTCFL	Q8NI51	663 aa	Predicted RBP	18.81	■□□□□ 0.6
XPO6-223	ENST00000574435	GTF3C2	Q8WUA4	911 aa	Predicted RBP	18.81	■□□□□ 0.6
XPO6-223	ENST00000574435	LZTS2	Q9BRK4	669 aa		18.81	■□□□□ 0.6
XPO6-223	ENST00000574435	PNMA3	Q9UL41	463 aa		18.81	■□□□□ 0.6
XPO6-223	ENST00000574435	KLF18	A0A0U1RQI7	1052 aa		18.8	■□□□□ 0.6
XPO6-223	ENST00000574435		A0A1W2PRG0	241 aa		18.8	■□□□□ 0.6
XPO6-223	ENST00000574435	TESPA1	A2RU30	521 aa	Predicted RBP	18.8	■□□□□ 0.6
XPO6-223	ENST00000574435		F5H6K3	240 aa		18.8	■□□□□ 0.6
XPO6-223	ENST00000574435	PARP1	P09874	1014 aa	Known RBP	18.8	■□□□□ 0.6
XPO6-223	ENST00000574435	FDX1	P10109	184 aa		18.8	■□□□□ 0.6
XPO6-223	ENST00000574435	PDHB	P11177	359 aa		18.8	■□□□□ 0.6
XPO6-223	ENST00000574435	SMARCA1	P28370	1054 aa		18.8	■□□□□ 0.6
XPO6-223	ENST00000574435	SLC1A4	P43007	532 aa		18.8	■□□□□ 0.6
XPO6-223	ENST00000574435	AK2	P54819	239 aa		18.8	■□□□□ 0.6
XPO6-223	ENST00000574435	KLRC3	Q07444	240 aa		18.8	■□□□□ 0.6
XPO6-223	ENST00000574435	TROAP	Q12815	778 aa		18.8	■□□□□ 0.6
XPO6-223	ENST00000574435	SLFN13	Q68D06	897 aa		18.8	■□□□□ 0.6
XPO6-223	ENST00000574435	OTUD7B	Q6GQQ9	843 aa		18.8	■□□□□ 0.6
XPO6-223	ENST00000574435	LRRC47	Q8N1G4	583 aa	Known RBP	18.8	■□□□□ 0.6
XPO6-223	ENST00000574435	ACER1	Q8TDN7	264 aa		18.8	■□□□□ 0.6
XPO6-223	ENST00000574435	SNX21	Q969T3	373 aa		18.8	■□□□□ 0.6
XPO6-223	ENST00000574435	LRRC2	Q9BYS8	371 aa		18.8	■□□□□ 0.6
XPO6-223	ENST00000574435	LIMCH1	Q9UPQ0	1083 aa		18.8	■□□□□ 0.6
XPO6-223	ENST00000574435	MYH6	P13533	1939 aa		18.8	■□□□□ 0.6
XPO6-223	ENST00000574435	NDUFB10	O96000	172 aa		18.79	■□□□□ 0.6
XPO6-223	ENST00000574435	CPA1	P15085	419 aa		18.79	■□□□□ 0.6
XPO6-223	ENST00000574435	HMGCS2	P54868	508 aa		18.79	■□□□□ 0.6
XPO6-223	ENST00000574435	GRM4	Q14833	912 aa		18.79	■□□□□ 0.6
XPO6-223	ENST00000574435	CPLX2	Q6PUV4	134 aa	Known RBP	18.79	■□□□□ 0.6
XPO6-223	ENST00000574435	FAM160B2	Q86V87	743 aa		18.79	■□□□□ 0.6
XPO6-223	ENST00000574435	CLEC10A	Q8IUN9	316 aa		18.79	■□□□□ 0.6
XPO6-223	ENST00000574435	NKX2-3	Q8TAU0	364 aa		18.79	■□□□□ 0.6
XPO6-223	ENST00000574435	TCEANC2	Q96MN5	208 aa		18.79	■□□□□ 0.6
XPO6-223	ENST00000574435	RBM27	Q9P2N5	1060 aa	Known RBP	18.79	■□□□□ 0.6
XPO6-223	ENST00000574435	PNMA2	Q9UL42	364 aa		18.79	■□□□□ 0.6
XPO6-223	ENST00000574435	AGTPBP1	Q9UPW5	1226 aa		18.79	■□□□□ 0.6
XPO6-223	ENST00000574435	GOLGA8B	A8MQT2	603 aa		18.78	■□□□□ 0.6
XPO6-223	ENST00000574435	BMP3	P12645	472 aa		18.78	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms