RNA–Protein interactions for RNA: ENST00000570845.5

ATP2A3-208, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, human

TSL 1 (best)

Gene ATP2A3, Length 604 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP2A3-208	ENST00000570845	GOPC	Q9HD26	462 aa		13.65	□□□□□ -0.22
ATP2A3-208	ENST00000570845	IL17RB	Q9NRM6	502 aa		13.65	□□□□□ -0.22
ATP2A3-208	ENST00000570845	TMX2	Q9Y320	296 aa		13.65	□□□□□ -0.22
ATP2A3-208	ENST00000570845	RAD21	O60216	631 aa		13.64	□□□□□ -0.23
ATP2A3-208	ENST00000570845	VCAM1	P19320	739 aa		13.64	□□□□□ -0.23
ATP2A3-208	ENST00000570845	NT5C2	P49902	561 aa		13.64	□□□□□ -0.23
ATP2A3-208	ENST00000570845	PABPC4	Q13310	644 aa	Known RBP eCLIP	13.64	□□□□□ -0.23
ATP2A3-208	ENST00000570845	CRHR2	Q13324	411 aa		13.64	□□□□□ -0.23
ATP2A3-208	ENST00000570845	STOX1	Q6ZVD7	989 aa		13.64	□□□□□ -0.23
ATP2A3-208	ENST00000570845	RALYL	Q86SE5	291 aa	Known RBP	13.64	□□□□□ -0.23
ATP2A3-208	ENST00000570845	NCOA7	Q8NI08	942 aa		13.64	□□□□□ -0.23
ATP2A3-208	ENST00000570845	ZKSCAN3	Q9BRR0	538 aa		13.64	□□□□□ -0.23
ATP2A3-208	ENST00000570845	VCPKMT	Q9H867	229 aa		13.64	□□□□□ -0.23
ATP2A3-208	ENST00000570845	ZSWIM5	Q9P217	1185 aa		13.64	□□□□□ -0.23
ATP2A3-208	ENST00000570845	STX8	Q9UNK0	236 aa		13.64	□□□□□ -0.23
ATP2A3-208	ENST00000570845	SLC45A1	Q9Y2W3	748 aa		13.64	□□□□□ -0.23
ATP2A3-208	ENST00000570845	KIAA1755	Q5JYT7	1200 aa		13.63	□□□□□ -0.23
ATP2A3-208	ENST00000570845	IQCA1	Q86XH1	822 aa		13.63	□□□□□ -0.23
ATP2A3-208	ENST00000570845	SPICE1	Q8N0Z3	855 aa		13.63	□□□□□ -0.23
ATP2A3-208	ENST00000570845	LRRC47	Q8N1G4	583 aa	Known RBP	13.63	□□□□□ -0.23
ATP2A3-208	ENST00000570845	LPAR1	Q92633	364 aa		13.63	□□□□□ -0.23
ATP2A3-208	ENST00000570845	PARK7	Q99497	189 aa	Known RBP	13.63	□□□□□ -0.23
ATP2A3-208	ENST00000570845	CFHR5	Q9BXR6	569 aa		13.63	□□□□□ -0.23
ATP2A3-208	ENST00000570845	ZFYVE28	Q9HCC9	887 aa		13.63	□□□□□ -0.23
ATP2A3-208	ENST00000570845	TCP11L1	Q9NUJ3	509 aa		13.63	□□□□□ -0.23
ATP2A3-208	ENST00000570845	PNMA3	Q9UL41	463 aa		13.63	□□□□□ -0.23
ATP2A3-208	ENST00000570845	MCM3AP	O60318	1980 aa		13.62	□□□□□ -0.23
ATP2A3-208	ENST00000570845	CYP2C8	P10632	490 aa		13.62	□□□□□ -0.23
ATP2A3-208	ENST00000570845	HSPA8	P11142	646 aa	Known RBP	13.62	□□□□□ -0.23
ATP2A3-208	ENST00000570845	ZKSCAN1	P17029	563 aa	Predicted RBP	13.62	□□□□□ -0.23
ATP2A3-208	ENST00000570845	OSBP	P22059	807 aa		13.62	□□□□□ -0.23
ATP2A3-208	ENST00000570845	CTCF	P49711	727 aa	Predicted RBP	13.62	□□□□□ -0.23
ATP2A3-208	ENST00000570845	IRX3	P78415	501 aa	Predicted RBP	13.62	□□□□□ -0.23
ATP2A3-208	ENST00000570845	CYB5R4	Q7L1T6	521 aa		13.62	□□□□□ -0.23
ATP2A3-208	ENST00000570845	MKL1	Q969V6	931 aa		13.62	□□□□□ -0.23
ATP2A3-208	ENST00000570845	UBAC1	Q9BSL1	405 aa		13.62	□□□□□ -0.23
ATP2A3-208	ENST00000570845	ASCC2	Q9H1I8	757 aa	Predicted RBP	13.62	□□□□□ -0.23
ATP2A3-208	ENST00000570845	R3HDML	Q9H3Y0	253 aa		13.62	□□□□□ -0.23
ATP2A3-208	ENST00000570845	RPAP3	Q9H6T3	665 aa	Predicted RBP	13.62	□□□□□ -0.23
ATP2A3-208	ENST00000570845	TNKS	O95271	1327 aa		13.62	□□□□□ -0.23
ATP2A3-208	ENST00000570845	USP17L15	C9J2P7	530 aa		13.61	□□□□□ -0.23
ATP2A3-208	ENST00000570845	USP17L13	C9JLJ4	530 aa		13.61	□□□□□ -0.23
ATP2A3-208	ENST00000570845	USP17L11	C9JVI0	530 aa		13.61	□□□□□ -0.23
ATP2A3-208	ENST00000570845	USP17L18	D6R9N7	530 aa		13.61	□□□□□ -0.23
ATP2A3-208	ENST00000570845	USP17L22	D6RA61	530 aa		13.61	□□□□□ -0.23
ATP2A3-208	ENST00000570845	USP17L17	D6RBQ6	530 aa		13.61	□□□□□ -0.23
ATP2A3-208	ENST00000570845	USP17L19	D6RCP7	530 aa		13.61	□□□□□ -0.23
ATP2A3-208	ENST00000570845	USP17L20	D6RJB6	530 aa		13.61	□□□□□ -0.23
ATP2A3-208	ENST00000570845		F5H6K3	240 aa		13.61	□□□□□ -0.23
ATP2A3-208	ENST00000570845	WDR46	O15213	610 aa	Known RBP	13.61	□□□□□ -0.23
ATP2A3-208	ENST00000570845	EPB41L2	O43491	1005 aa	Known RBP	13.61	□□□□□ -0.23
ATP2A3-208	ENST00000570845	HOXA7	P31268	230 aa	Predicted RBP	13.61	□□□□□ -0.23
ATP2A3-208	ENST00000570845	HSPA4	P34932	840 aa		13.61	□□□□□ -0.23
ATP2A3-208	ENST00000570845	NOV	P48745	357 aa		13.61	□□□□□ -0.23
ATP2A3-208	ENST00000570845	KLRC3	Q07444	240 aa		13.61	□□□□□ -0.23
ATP2A3-208	ENST00000570845	USP17L24	Q0WX57	530 aa		13.61	□□□□□ -0.23
ATP2A3-208	ENST00000570845	CCDC178	Q5BJE1	867 aa		13.61	□□□□□ -0.23
ATP2A3-208	ENST00000570845	RCSD1	Q6JBY9	416 aa		13.61	□□□□□ -0.23
ATP2A3-208	ENST00000570845	GMCL1P1	Q8NEA9	526 aa		13.61	□□□□□ -0.23
ATP2A3-208	ENST00000570845	SMCR8	Q8TEV9	937 aa	Predicted RBP	13.61	□□□□□ -0.23
ATP2A3-208	ENST00000570845	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	13.61	□□□□□ -0.23
ATP2A3-208	ENST00000570845	USP26	Q9BXU7	913 aa		13.61	□□□□□ -0.23
ATP2A3-208	ENST00000570845	TANGO6	Q9C0B7	1094 aa		13.61	□□□□□ -0.23
ATP2A3-208	ENST00000570845	SYNPO2	Q9UMS6	1093 aa		13.61	□□□□□ -0.23
ATP2A3-208	ENST00000570845	ADGRA2	Q96PE1	1338 aa		13.61	□□□□□ -0.23
ATP2A3-208	ENST00000570845	TLR2	O60603	784 aa		13.6	□□□□□ -0.23
ATP2A3-208	ENST00000570845	NDUFB10	O96000	172 aa		13.6	□□□□□ -0.23
ATP2A3-208	ENST00000570845	TOP1	P11387	765 aa	Known RBP	13.6	□□□□□ -0.23
ATP2A3-208	ENST00000570845	LBX1	P52954	281 aa		13.6	□□□□□ -0.23
ATP2A3-208	ENST00000570845	KRT32	Q14532	448 aa		13.6	□□□□□ -0.23
ATP2A3-208	ENST00000570845	C8orf34	Q49A92	452 aa		13.6	□□□□□ -0.23
ATP2A3-208	ENST00000570845	FAM83B	Q5T0W9	1011 aa		13.6	□□□□□ -0.23
ATP2A3-208	ENST00000570845	CATSPERG	Q6ZRH7	1159 aa		13.6	□□□□□ -0.23
ATP2A3-208	ENST00000570845	CHST3	Q7LGC8	479 aa		13.6	□□□□□ -0.23
ATP2A3-208	ENST00000570845	MB21D2	Q8IYB1	491 aa	Predicted RBP	13.6	□□□□□ -0.23
ATP2A3-208	ENST00000570845	RASEF	Q8IZ41	740 aa		13.6	□□□□□ -0.23
ATP2A3-208	ENST00000570845	ENAH	Q8N8S7	591 aa	Predicted RBP	13.6	□□□□□ -0.23
ATP2A3-208	ENST00000570845	CHMP4C	Q96CF2	233 aa		13.6	□□□□□ -0.23
ATP2A3-208	ENST00000570845	TTC14	Q96N46	770 aa		13.6	□□□□□ -0.23
ATP2A3-208	ENST00000570845	TMEM47	Q9BQJ4	181 aa		13.6	□□□□□ -0.23
ATP2A3-208	ENST00000570845	MTMR7	Q9Y216	660 aa		13.6	□□□□□ -0.23
ATP2A3-208	ENST00000570845	ERICH2	A1L162	156 aa		13.59	□□□□□ -0.23
ATP2A3-208	ENST00000570845	GPR25	O00155	361 aa		13.59	□□□□□ -0.23
ATP2A3-208	ENST00000570845	IFIT3	O14879	490 aa	Known RBP	13.59	□□□□□ -0.23
ATP2A3-208	ENST00000570845	EIF5B	O60841	1220 aa	Known RBP	13.59	□□□□□ -0.23
ATP2A3-208	ENST00000570845	MCC	P23508	829 aa		13.59	□□□□□ -0.23
ATP2A3-208	ENST00000570845	HERVK_113	P62684	666 aa		13.59	□□□□□ -0.23
ATP2A3-208	ENST00000570845	SART3	Q15020	963 aa	Known RBP	13.59	□□□□□ -0.23
ATP2A3-208	ENST00000570845	TSGA10IP	Q3SY00	556 aa		13.59	□□□□□ -0.23
ATP2A3-208	ENST00000570845	SLFN13	Q68D06	897 aa		13.59	□□□□□ -0.23
ATP2A3-208	ENST00000570845	DGKH	Q86XP1	1220 aa		13.59	□□□□□ -0.23
ATP2A3-208	ENST00000570845	KCNB2	Q92953	911 aa		13.59	□□□□□ -0.23
ATP2A3-208	ENST00000570845	NUP88	Q99567	741 aa	Predicted RBP	13.59	□□□□□ -0.23
ATP2A3-208	ENST00000570845	P2RX7	Q99572	595 aa	Known RBP	13.59	□□□□□ -0.23
ATP2A3-208	ENST00000570845	CPA4	Q9UI42	421 aa		13.59	□□□□□ -0.23
ATP2A3-208	ENST00000570845	ISY1	Q9ULR0	285 aa	Known RBP	13.59	□□□□□ -0.23
ATP2A3-208	ENST00000570845	SNX14	Q9Y5W7	946 aa		13.59	□□□□□ -0.23
ATP2A3-208	ENST00000570845	LCT	P09848	1927 aa		13.58	□□□□□ -0.23
ATP2A3-208	ENST00000570845	PRC1	O43663	620 aa		13.58	□□□□□ -0.24
ATP2A3-208	ENST00000570845	FLOT1	O75955	427 aa		13.58	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms