RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 NUP133Q8WUM0 1156 aa8.42□□□□□ -1.06
HERPUD1-217ENST00000569429 WDR18Q9BV38 432 aa8.42□□□□□ -1.06
HERPUD1-217ENST00000569429 CERS4Q9HA82 394 aa8.42□□□□□ -1.06
HERPUD1-217ENST00000569429 AS3MTQ9HBK9 375 aa8.42□□□□□ -1.06
HERPUD1-217ENST00000569429 XPNPEP3Q9NQH7 507 aa8.42□□□□□ -1.06
HERPUD1-217ENST00000569429 STARD7Q9NQZ5 370 aa8.42□□□□□ -1.06
HERPUD1-217ENST00000569429 CNNM1Q9NRU3 951 aa8.42□□□□□ -1.06
HERPUD1-217ENST00000569429 TMOD4Q9NZQ9 345 aa8.42□□□□□ -1.06
HERPUD1-217ENST00000569429 NDUFB9Q9Y6M9 179 aa8.42□□□□□ -1.06
HERPUD1-217ENST00000569429 IVNS1ABPQ9Y6Y0 642 aa8.42□□□□□ -1.06
HERPUD1-217ENST00000569429 ZNF536O15090 1300 aa8.42□□□□□ -1.06
HERPUD1-217ENST00000569429 RFX7Q2KHR2 1363 aa8.42□□□□□ -1.06
HERPUD1-217ENST00000569429 UNC79Q9P2D8 2635 aa8.42□□□□□ -1.06
HERPUD1-217ENST00000569429 SCN5AQ14524 2016 aa8.41□□□□□ -1.06
HERPUD1-217ENST00000569429 PI4KAP2A4QPH2 592 aa8.41□□□□□ -1.06
HERPUD1-217ENST00000569429 C19orf81C9J6K1 198 aa8.41□□□□□ -1.06
HERPUD1-217ENST00000569429 CNMDO75829 334 aa8.41□□□□□ -1.06
HERPUD1-217ENST00000569429 RARBP10826 455 aa8.41□□□□□ -1.06
HERPUD1-217ENST00000569429 ATP2A2P16615 1042 aaKnown RBP8.41□□□□□ -1.06
HERPUD1-217ENST00000569429 ZSCAN29Q8IWY8 852 aaPredicted RBP8.41□□□□□ -1.06
HERPUD1-217ENST00000569429 SUGP1Q8IWZ8 645 aaKnown RBP8.41□□□□□ -1.06
HERPUD1-217ENST00000569429 PI4KAP1Q8N8J0 262 aa8.41□□□□□ -1.06
HERPUD1-217ENST00000569429 ARNTL2Q8WYA1 636 aa8.41□□□□□ -1.06
HERPUD1-217ENST00000569429 EDAQ92838 391 aa8.41□□□□□ -1.06
HERPUD1-217ENST00000569429 PPP1R12CQ9BZL4 782 aa8.41□□□□□ -1.06
HERPUD1-217ENST00000569429 OTOGLQ3ZCN5 2332 aa8.41□□□□□ -1.06
HERPUD1-217ENST00000569429 SIP14410 1827 aa8.4□□□□□ -1.06
HERPUD1-217ENST00000569429 ZFYVE26Q68DK2 2539 aa8.4□□□□□ -1.06
HERPUD1-217ENST00000569429 SOWAHBA6NEL2 793 aa8.4□□□□□ -1.06
HERPUD1-217ENST00000569429 MOXD2PA6NHM9 499 aa8.4□□□□□ -1.06
HERPUD1-217ENST00000569429 PGK1P00558 417 aa8.4□□□□□ -1.06
HERPUD1-217ENST00000569429 IRS1P35568 1242 aa8.4□□□□□ -1.06
HERPUD1-217ENST00000569429 CAP2P40123 477 aa8.4□□□□□ -1.06
HERPUD1-217ENST00000569429 TMPOP42166 694 aaKnown RBP8.4□□□□□ -1.06
HERPUD1-217ENST00000569429 ACLYP53396 1101 aa8.4□□□□□ -1.06
HERPUD1-217ENST00000569429 TAP1Q03518 808 aa8.4□□□□□ -1.06
HERPUD1-217ENST00000569429 MTMR2Q13614 643 aa8.4□□□□□ -1.06
HERPUD1-217ENST00000569429 DIXDC1Q155Q3 683 aa8.4□□□□□ -1.06
HERPUD1-217ENST00000569429 CAVIN4Q5BKX8 364 aa8.4□□□□□ -1.06
HERPUD1-217ENST00000569429 PRAMEF19Q5SWL8 479 aa8.4□□□□□ -1.06
HERPUD1-217ENST00000569429 WDR78Q5VTH9 848 aa8.4□□□□□ -1.06
HERPUD1-217ENST00000569429 DGLUCYQ7Z3D6 616 aa8.4□□□□□ -1.06
HERPUD1-217ENST00000569429 DPP9Q86TI2 863 aa8.4□□□□□ -1.06
HERPUD1-217ENST00000569429 NEK9Q8TD19 979 aa8.4□□□□□ -1.06
HERPUD1-217ENST00000569429 PBXIP1Q96AQ6 731 aa8.4□□□□□ -1.06
HERPUD1-217ENST00000569429 PTPRSQ13332 1948 aa8.4□□□□□ -1.06
HERPUD1-217ENST00000569429 COL11A1P12107 1806 aaPredicted RBP8.4□□□□□ -1.07
HERPUD1-217ENST00000569429 NAV2Q8IVL1 2488 aa8.4□□□□□ -1.07
HERPUD1-217ENST00000569429 FRYLO94915 3013 aa8.4□□□□□ -1.07
HERPUD1-217ENST00000569429 ROBO3Q96MS0 1386 aa8.39□□□□□ -1.07
HERPUD1-217ENST00000569429 ASPMQ8IZT6 3477 aa8.39□□□□□ -1.07
HERPUD1-217ENST00000569429 ELP1O95163 1332 aa8.39□□□□□ -1.07
HERPUD1-217ENST00000569429 TMEM221A6NGB7 291 aa8.39□□□□□ -1.07
HERPUD1-217ENST00000569429 M0R296 226 aa8.39□□□□□ -1.07
HERPUD1-217ENST00000569429 STRNO43815 780 aa8.39□□□□□ -1.07
HERPUD1-217ENST00000569429 ADAMTS4O75173 837 aa8.39□□□□□ -1.07
HERPUD1-217ENST00000569429 CYP2C18P33260 490 aa8.39□□□□□ -1.07
HERPUD1-217ENST00000569429 NBL1P41271 181 aa8.39□□□□□ -1.07
HERPUD1-217ENST00000569429 NUBP1P53384 320 aa8.39□□□□□ -1.07
HERPUD1-217ENST00000569429 FOXO4P98177 505 aa8.39□□□□□ -1.07
HERPUD1-217ENST00000569429 ACAP1Q15027 740 aa8.39□□□□□ -1.07
HERPUD1-217ENST00000569429 ADHFE1Q8IWW8 467 aa8.39□□□□□ -1.07
HERPUD1-217ENST00000569429 FAM126BQ8IXS8 530 aa8.39□□□□□ -1.07
HERPUD1-217ENST00000569429 RPUSD2Q8IZ73 545 aaKnown RBP8.39□□□□□ -1.07
HERPUD1-217ENST00000569429 FBXL6Q8N531 539 aa8.39□□□□□ -1.07
HERPUD1-217ENST00000569429 WDR66Q8TBY9 1149 aa8.39□□□□□ -1.07
HERPUD1-217ENST00000569429 ZNF594Q96JF6 807 aaPredicted RBP8.39□□□□□ -1.07
HERPUD1-217ENST00000569429 FSD1Q9BTV5 496 aa8.39□□□□□ -1.07
HERPUD1-217ENST00000569429 FOXD4L1Q9NU39 408 aa8.39□□□□□ -1.07
HERPUD1-217ENST00000569429 NRBP1Q9UHY1 535 aa8.39□□□□□ -1.07
HERPUD1-217ENST00000569429 MUTYHQ9UIF7 546 aa8.39□□□□□ -1.07
HERPUD1-217ENST00000569429 FAM50BQ9Y247 325 aa8.39□□□□□ -1.07
HERPUD1-217ENST00000569429 LAS1LQ9Y4W2 734 aaKnown RBP8.39□□□□□ -1.07
HERPUD1-217ENST00000569429 MYO10Q9HD67 2058 aa8.39□□□□□ -1.07
HERPUD1-217ENST00000569429 MAST4O15021 2626 aa8.38□□□□□ -1.07
HERPUD1-217ENST00000569429 ARHGEF15O94989 841 aa8.38□□□□□ -1.07
HERPUD1-217ENST00000569429 ADORA2AP29274 412 aa8.38□□□□□ -1.07
HERPUD1-217ENST00000569429 CCDC57Q2TAC2 916 aa8.38□□□□□ -1.07
HERPUD1-217ENST00000569429 TAF7LQ5H9L4 462 aa8.38□□□□□ -1.07
HERPUD1-217ENST00000569429 CCSAPQ6IQ19 270 aaPredicted RBP8.38□□□□□ -1.07
HERPUD1-217ENST00000569429 LBX2Q6XYB7 198 aa8.38□□□□□ -1.07
HERPUD1-217ENST00000569429 TRIM67Q6ZTA4 783 aa8.38□□□□□ -1.07
HERPUD1-217ENST00000569429 KLHDC9Q8NEP7 349 aa8.38□□□□□ -1.07
HERPUD1-217ENST00000569429 MCM3APO60318 1980 aa8.37□□□□□ -1.07
HERPUD1-217ENST00000569429 TRIP12Q14669 1992 aaPredicted RBP8.37□□□□□ -1.07
HERPUD1-217ENST00000569429 ZBBXA8MT70 800 aa8.37□□□□□ -1.07
HERPUD1-217ENST00000569429 USP17L10C9JJH3 530 aa8.37□□□□□ -1.07
HERPUD1-217ENST00000569429 ARVCFO00192 962 aa8.37□□□□□ -1.07
HERPUD1-217ENST00000569429 TLR3O15455 904 aaKnown RBP8.37□□□□□ -1.07
HERPUD1-217ENST00000569429 CD4P01730 458 aa8.37□□□□□ -1.07
HERPUD1-217ENST00000569429 RRP1BQ14684 758 aaKnown RBP8.37□□□□□ -1.07
HERPUD1-217ENST00000569429 ST3GAL2Q16842 350 aa8.37□□□□□ -1.07
HERPUD1-217ENST00000569429 PHOSPHO2Q8TCD6 241 aa8.37□□□□□ -1.07
HERPUD1-217ENST00000569429 RMDN1Q96DB5 314 aa8.37□□□□□ -1.07
HERPUD1-217ENST00000569429 VWCEQ96DN2 955 aa8.37□□□□□ -1.07
HERPUD1-217ENST00000569429 GLT1D1Q96MS3 346 aa8.37□□□□□ -1.07
HERPUD1-217ENST00000569429 CHMP4AQ9BY43 222 aa8.37□□□□□ -1.07
HERPUD1-217ENST00000569429 MYH16Q9H6N6 1097 aa8.37□□□□□ -1.07
HERPUD1-217ENST00000569429 DDX4Q9NQI0 724 aaKnown RBP8.37□□□□□ -1.07
HERPUD1-217ENST00000569429 SLC5A4Q9NY91 659 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms