RNA–Protein interactions for RNA: ENST00000568917.1

CNOT1-214, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5

Gene CNOT1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-214ENST00000568917 DDX11Q96FC9 970 aa10.9□□□□□ -0.66
CNOT1-214ENST00000568917 IDI2Q9BXS1 227 aa10.9□□□□□ -0.66
CNOT1-214ENST00000568917 RNF26Q9BY78 433 aaPredicted RBP10.9□□□□□ -0.66
CNOT1-214ENST00000568917 EHD4Q9H223 541 aa10.9□□□□□ -0.66
CNOT1-214ENST00000568917 FAM217BQ9NTX9 383 aaPredicted RBP10.9□□□□□ -0.66
CNOT1-214ENST00000568917 RBM27Q9P2N5 1060 aaKnown RBP10.9□□□□□ -0.66
CNOT1-214ENST00000568917 CFAP45Q9UL16 551 aa10.9□□□□□ -0.66
CNOT1-214ENST00000568917 DDX49Q9Y6V7 483 aaKnown RBP10.9□□□□□ -0.66
CNOT1-214ENST00000568917 MYH8P13535 1937 aa10.9□□□□□ -0.66
CNOT1-214ENST00000568917 WDHD1O75717 1129 aaPredicted RBP10.89□□□□□ -0.67
CNOT1-214ENST00000568917 CYP2D6P10635 497 aa10.89□□□□□ -0.67
CNOT1-214ENST00000568917 CDC27P30260 824 aa10.89□□□□□ -0.67
CNOT1-214ENST00000568917 NOVP48745 357 aa10.89□□□□□ -0.67
CNOT1-214ENST00000568917 GABPAQ06546 454 aa10.89□□□□□ -0.67
CNOT1-214ENST00000568917 SSRP1Q08945 709 aaKnown RBP10.89□□□□□ -0.67
CNOT1-214ENST00000568917 RESTQ13127 1097 aa10.89□□□□□ -0.67
CNOT1-214ENST00000568917 BRAPQ7Z569 592 aa10.89□□□□□ -0.67
CNOT1-214ENST00000568917 LARGE2Q8N3Y3 721 aa10.89□□□□□ -0.67
CNOT1-214ENST00000568917 AGBL3Q8NEM8 1001 aa10.89□□□□□ -0.67
CNOT1-214ENST00000568917 FBXO18Q8NFZ0 1043 aa10.89□□□□□ -0.67
CNOT1-214ENST00000568917 C8orf76Q96K31 380 aa10.89□□□□□ -0.67
CNOT1-214ENST00000568917 OSBPL5Q9H0X9 879 aaPredicted RBP10.89□□□□□ -0.67
CNOT1-214ENST00000568917 SENP2Q9HC62 589 aa10.89□□□□□ -0.67
CNOT1-214ENST00000568917 USP40Q9NVE5 1235 aa10.89□□□□□ -0.67
CNOT1-214ENST00000568917 HDAC9Q9UKV0 1011 aa10.89□□□□□ -0.67
CNOT1-214ENST00000568917 MYH6P13533 1939 aa10.89□□□□□ -0.67
CNOT1-214ENST00000568917 YDJCA8MPS7 323 aa10.88□□□□□ -0.67
CNOT1-214ENST00000568917 PRPF40AO75400 957 aaKnown RBP10.88□□□□□ -0.67
CNOT1-214ENST00000568917 DEXIO95424 95 aa10.88□□□□□ -0.67
CNOT1-214ENST00000568917 HLA-DOAP06340 250 aa10.88□□□□□ -0.67
CNOT1-214ENST00000568917 TSPY3P0CV98 308 aa10.88□□□□□ -0.67
CNOT1-214ENST00000568917 TSPY8P0CW00 308 aa10.88□□□□□ -0.67
CNOT1-214ENST00000568917 RASA1P20936 1047 aa10.88□□□□□ -0.67
CNOT1-214ENST00000568917 KIF5BP33176 963 aa10.88□□□□□ -0.67
CNOT1-214ENST00000568917 ADD1P35611 737 aaKnown RBP10.88□□□□□ -0.67
CNOT1-214ENST00000568917 CDK8P49336 464 aa10.88□□□□□ -0.67
CNOT1-214ENST00000568917 GNAQP50148 359 aa10.88□□□□□ -0.67
CNOT1-214ENST00000568917 PLCD1P51178 756 aa10.88□□□□□ -0.67
CNOT1-214ENST00000568917 UBE2HP62256 183 aa10.88□□□□□ -0.67
CNOT1-214ENST00000568917 TFAP4Q01664 338 aa10.88□□□□□ -0.67
CNOT1-214ENST00000568917 TROAPQ12815 778 aa10.88□□□□□ -0.67
CNOT1-214ENST00000568917 FOXD4L5Q5VV16 416 aaPredicted RBP10.88□□□□□ -0.67
CNOT1-214ENST00000568917 CDC42EP5Q6NZY7 148 aa10.88□□□□□ -0.67
CNOT1-214ENST00000568917 RSBN1LQ6PCB5 846 aaPredicted RBP10.88□□□□□ -0.67
CNOT1-214ENST00000568917 NIM1KQ8IY84 436 aa10.88□□□□□ -0.67
CNOT1-214ENST00000568917 FAM177A1Q8N128 213 aaPredicted RBP10.88□□□□□ -0.67
CNOT1-214ENST00000568917 NEDD1Q8NHV4 660 aa10.88□□□□□ -0.67
CNOT1-214ENST00000568917 FOXD4L4Q8WXT5 416 aaPredicted RBP10.88□□□□□ -0.67
CNOT1-214ENST00000568917 ZKSCAN3Q9BRR0 538 aa10.88□□□□□ -0.67
CNOT1-214ENST00000568917 NPDC1Q9NQX5 325 aaPredicted RBP10.88□□□□□ -0.67
CNOT1-214ENST00000568917 ZNRF3Q9ULT6 936 aa10.88□□□□□ -0.67
CNOT1-214ENST00000568917 F8W031 263 aaPredicted RBP10.87□□□□□ -0.67
CNOT1-214ENST00000568917 ENTPD3O75355 529 aa10.87□□□□□ -0.67
CNOT1-214ENST00000568917 PRDM1O75626 825 aa10.87□□□□□ -0.67
CNOT1-214ENST00000568917 XBP1P17861 261 aa10.87□□□□□ -0.67
CNOT1-214ENST00000568917 SCNN1DP51172 638 aa10.87□□□□□ -0.67
CNOT1-214ENST00000568917 DNM1Q05193 864 aaKnown RBP10.87□□□□□ -0.67
CNOT1-214ENST00000568917 TRIM29Q14134 588 aa10.87□□□□□ -0.67
CNOT1-214ENST00000568917 R3HDM1Q15032 1099 aaKnown RBP10.87□□□□□ -0.67
CNOT1-214ENST00000568917 ILDR2Q71H61 639 aa10.87□□□□□ -0.67
CNOT1-214ENST00000568917 NBPF11Q86T75 865 aa10.87□□□□□ -0.67
CNOT1-214ENST00000568917 KIAA0825Q8IV33 1275 aa10.87□□□□□ -0.67
CNOT1-214ENST00000568917 CRACR2BQ8N4Y2 399 aaPredicted RBP10.87□□□□□ -0.67
CNOT1-214ENST00000568917 MTMR14Q8NCE2 650 aa10.87□□□□□ -0.67
CNOT1-214ENST00000568917 CTCFLQ8NI51 663 aaPredicted RBP10.87□□□□□ -0.67
CNOT1-214ENST00000568917 SYAP1Q96A49 352 aaPredicted RBP10.87□□□□□ -0.67
CNOT1-214ENST00000568917 CCDC17Q96LX7 622 aa10.87□□□□□ -0.67
CNOT1-214ENST00000568917 ZNF396Q96N95 335 aaPredicted RBP10.87□□□□□ -0.67
CNOT1-214ENST00000568917 GMLQ99445 158 aa10.87□□□□□ -0.67
CNOT1-214ENST00000568917 ALG1Q9BT22 464 aa10.87□□□□□ -0.67
CNOT1-214ENST00000568917 TAOK3Q9H2K8 898 aa10.87□□□□□ -0.67
CNOT1-214ENST00000568917 KAT14Q9H8E8 782 aa10.87□□□□□ -0.67
CNOT1-214ENST00000568917 SERPINB13Q9UIV8 391 aa10.87□□□□□ -0.67
CNOT1-214ENST00000568917 ADAMTSL1Q8N6G6 1762 aa10.87□□□□□ -0.67
CNOT1-214ENST00000568917 ATRNL1Q5VV63 1379 aa10.87□□□□□ -0.67
CNOT1-214ENST00000568917 GREB1LQ9C091 1923 aaPredicted RBP10.87□□□□□ -0.67
CNOT1-214ENST00000568917 SMIM22K7EJ46 135 aa10.86□□□□□ -0.67
CNOT1-214ENST00000568917 SMARCA1P28370 1054 aa10.86□□□□□ -0.67
CNOT1-214ENST00000568917 AKAP17AQ02040 695 aaKnown RBP10.86□□□□□ -0.67
CNOT1-214ENST00000568917 FAM47AQ5JRC9 791 aa10.86□□□□□ -0.67
CNOT1-214ENST00000568917 FKBP1CQ5VVH2 108 aa10.86□□□□□ -0.67
CNOT1-214ENST00000568917 RCSD1Q6JBY9 416 aa10.86□□□□□ -0.67
CNOT1-214ENST00000568917 USP48Q86UV5 1035 aa10.86□□□□□ -0.67
CNOT1-214ENST00000568917 METTL16Q86W50 562 aaKnown RBP10.86□□□□□ -0.67
CNOT1-214ENST00000568917 STK11IPQ8N1F8 1099 aa10.86□□□□□ -0.67
CNOT1-214ENST00000568917 OGFOD1Q8N543 542 aa10.86□□□□□ -0.67
CNOT1-214ENST00000568917 RNF166Q96A37 237 aaPredicted RBP10.86□□□□□ -0.67
CNOT1-214ENST00000568917 DYNLL2Q96FJ2 89 aa10.86□□□□□ -0.67
CNOT1-214ENST00000568917 LZTS2Q9BRK4 669 aa10.86□□□□□ -0.67
CNOT1-214ENST00000568917 MXD3Q9BW11 206 aa10.86□□□□□ -0.67
CNOT1-214ENST00000568917 KCNQ5Q9NR82 932 aa10.86□□□□□ -0.67
CNOT1-214ENST00000568917 IL17RBQ9NRM6 502 aa10.86□□□□□ -0.67
CNOT1-214ENST00000568917 SAP30BPQ9UHR5 308 aaKnown RBP10.86□□□□□ -0.67
CNOT1-214ENST00000568917 PRPF3O43395 683 aaKnown RBP10.85□□□□□ -0.67
CNOT1-214ENST00000568917 RPS12P25398 132 aaKnown RBP10.85□□□□□ -0.67
CNOT1-214ENST00000568917 TMTC3Q6ZXV5 915 aa10.85□□□□□ -0.67
CNOT1-214ENST00000568917 FERMT3Q86UX7 667 aa10.85□□□□□ -0.67
CNOT1-214ENST00000568917 FOXP4Q8IVH2 680 aaPredicted RBP10.85□□□□□ -0.67
CNOT1-214ENST00000568917 NUP133Q8WUM0 1156 aa10.85□□□□□ -0.67
CNOT1-214ENST00000568917 MYL10Q9BUA6 226 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms