RNA–Protein interactions for RNA: ENST00000568743.1

PKM-221, Transcript of pyruvate kinase M1/2, humanhuman

TSL 1 (best)

Gene PKM, Length 580 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-221ENST00000568743 RASGRP2Q7LDG7 609 aa11.91□□□□□ -0.5
PKM-221ENST00000568743 ENAHQ8N8S7 591 aaPredicted RBP11.91□□□□□ -0.5
PKM-221ENST00000568743 JMYQ8N9B5 988 aa11.91□□□□□ -0.5
PKM-221ENST00000568743 PROCA1Q8NCQ7 364 aaPredicted RBP11.91□□□□□ -0.5
PKM-221ENST00000568743 TCEANC2Q96MN5 208 aa11.91□□□□□ -0.5
PKM-221ENST00000568743 NEK1Q96PY6 1258 aa11.91□□□□□ -0.5
PKM-221ENST00000568743 NUP88Q99567 741 aaPredicted RBP11.91□□□□□ -0.5
PKM-221ENST00000568743 TMEM47Q9BQJ4 181 aa11.91□□□□□ -0.5
PKM-221ENST00000568743 LRRC2Q9BYS8 371 aa11.91□□□□□ -0.5
PKM-221ENST00000568743 VCPKMTQ9H867 229 aa11.91□□□□□ -0.5
PKM-221ENST00000568743 SENP2Q9HC62 589 aa11.91□□□□□ -0.5
PKM-221ENST00000568743 GOPCQ9HD26 462 aa11.91□□□□□ -0.5
PKM-221ENST00000568743 GPHNQ9NQX3 736 aaPredicted RBP11.91□□□□□ -0.5
PKM-221ENST00000568743 AGTPBP1Q9UPW5 1226 aa11.91□□□□□ -0.5
PKM-221ENST00000568743 IFIT3O14879 490 aaKnown RBP11.9□□□□□ -0.5
PKM-221ENST00000568743 TRPA1O75762 1119 aa11.9□□□□□ -0.5
PKM-221ENST00000568743 NDUFB10O96000 172 aa11.9□□□□□ -0.5
PKM-221ENST00000568743 VCAM1P19320 739 aa11.9□□□□□ -0.5
PKM-221ENST00000568743 NOVP48745 357 aa11.9□□□□□ -0.5
PKM-221ENST00000568743 KRT32Q14532 448 aa11.9□□□□□ -0.5
PKM-221ENST00000568743 ANKRD23Q86SG2 305 aa11.9□□□□□ -0.5
PKM-221ENST00000568743 MKL1Q969V6 931 aa11.9□□□□□ -0.5
PKM-221ENST00000568743 C12orf42Q96LP6 360 aa11.9□□□□□ -0.5
PKM-221ENST00000568743 RPAP3Q9H6T3 665 aaPredicted RBP11.9□□□□□ -0.5
PKM-221ENST00000568743 RNF186Q9NXI6 227 aa11.9□□□□□ -0.5
PKM-221ENST00000568743 TSKSQ9UJT2 592 aa11.9□□□□□ -0.5
PKM-221ENST00000568743 PCNTO95613 3336 aa11.89□□□□□ -0.51
PKM-221ENST00000568743 F5H6K3 240 aa11.89□□□□□ -0.51
PKM-221ENST00000568743 EIF5BO60841 1220 aaKnown RBP11.89□□□□□ -0.51
PKM-221ENST00000568743 CYP2C8P10632 490 aa11.89□□□□□ -0.51
PKM-221ENST00000568743 TOP1P11387 765 aaKnown RBP11.89□□□□□ -0.51
PKM-221ENST00000568743 MCM5P33992 734 aa11.89□□□□□ -0.51
PKM-221ENST00000568743 MAP2K1Q02750 393 aaPredicted RBP11.89□□□□□ -0.51
PKM-221ENST00000568743 KLRC3Q07444 240 aa11.89□□□□□ -0.51
PKM-221ENST00000568743 SEC23AQ15436 765 aa11.89□□□□□ -0.51
PKM-221ENST00000568743 TAF1CQ15572 869 aaPredicted RBP11.89□□□□□ -0.51
PKM-221ENST00000568743 TMEM67Q5HYA8 995 aa11.89□□□□□ -0.51
PKM-221ENST00000568743 PPP4R3BQ5MIZ7 849 aa11.89□□□□□ -0.51
PKM-221ENST00000568743 FAM83BQ5T0W9 1011 aa11.89□□□□□ -0.51
PKM-221ENST00000568743 OTUD7BQ6GQQ9 843 aa11.89□□□□□ -0.51
PKM-221ENST00000568743 SAMD1Q6SPF0 538 aaPredicted RBP11.89□□□□□ -0.51
PKM-221ENST00000568743 REM2Q8IYK8 340 aaPredicted RBP11.89□□□□□ -0.51
PKM-221ENST00000568743 BEGAINQ9BUH8 593 aa11.89□□□□□ -0.51
PKM-221ENST00000568743 TANGO6Q9C0B7 1094 aa11.89□□□□□ -0.51
PKM-221ENST00000568743 R3HDMLQ9H3Y0 253 aa11.89□□□□□ -0.51
PKM-221ENST00000568743 WBP1LQ9NX94 342 aa11.89□□□□□ -0.51
PKM-221ENST00000568743 ISY1Q9ULR0 285 aaKnown RBP11.89□□□□□ -0.51
PKM-221ENST00000568743 PTPRFP10586 1907 aa11.88□□□□□ -0.51
PKM-221ENST00000568743 ERICH2A1L162 156 aa11.88□□□□□ -0.51
PKM-221ENST00000568743 TBC1D8O95759 1140 aa11.88□□□□□ -0.51
PKM-221ENST00000568743 CASTP20810 708 aaKnown RBP11.88□□□□□ -0.51
PKM-221ENST00000568743 NT5C2P49902 561 aa11.88□□□□□ -0.51
PKM-221ENST00000568743 IRX3P78415 501 aaPredicted RBP11.88□□□□□ -0.51
PKM-221ENST00000568743 EXOSC10Q01780 885 aaKnown RBP11.88□□□□□ -0.51
PKM-221ENST00000568743 CRHR2Q13324 411 aa11.88□□□□□ -0.51
PKM-221ENST00000568743 WTAPQ15007 396 aa11.88□□□□□ -0.51
PKM-221ENST00000568743 SART3Q15020 963 aaKnown RBP11.88□□□□□ -0.51
PKM-221ENST00000568743 CCDC178Q5BJE1 867 aa11.88□□□□□ -0.51
PKM-221ENST00000568743 IFIT1BQ5T764 474 aaKnown RBP11.88□□□□□ -0.51
PKM-221ENST00000568743 SLFN13Q68D06 897 aa11.88□□□□□ -0.51
PKM-221ENST00000568743 BLOC1S2Q6QNY1 142 aa11.88□□□□□ -0.51
PKM-221ENST00000568743 DGKHQ86XP1 1220 aa11.88□□□□□ -0.51
PKM-221ENST00000568743 IGDCC4Q8TDY8 1250 aa11.88□□□□□ -0.51
PKM-221ENST00000568743 LPAR1Q92633 364 aa11.88□□□□□ -0.51
PKM-221ENST00000568743 TTC14Q96N46 770 aa11.88□□□□□ -0.51
PKM-221ENST00000568743 BACH2Q9BYV9 841 aa11.88□□□□□ -0.51
PKM-221ENST00000568743 UPF3BQ9BZI7 483 aaKnown RBP11.88□□□□□ -0.51
PKM-221ENST00000568743 ASCC2Q9H1I8 757 aaPredicted RBP11.88□□□□□ -0.51
PKM-221ENST00000568743 KAT14Q9H8E8 782 aa11.88□□□□□ -0.51
PKM-221ENST00000568743 LOC285556D6RIA3 1793 aa11.87□□□□□ -0.51
PKM-221ENST00000568743 USP17L15C9J2P7 530 aa11.87□□□□□ -0.51
PKM-221ENST00000568743 USP17L13C9JLJ4 530 aa11.87□□□□□ -0.51
PKM-221ENST00000568743 USP17L11C9JVI0 530 aa11.87□□□□□ -0.51
PKM-221ENST00000568743 USP17L18D6R9N7 530 aa11.87□□□□□ -0.51
PKM-221ENST00000568743 USP17L22D6RA61 530 aa11.87□□□□□ -0.51
PKM-221ENST00000568743 USP17L17D6RBQ6 530 aa11.87□□□□□ -0.51
PKM-221ENST00000568743 USP17L19D6RCP7 530 aa11.87□□□□□ -0.51
PKM-221ENST00000568743 USP17L20D6RJB6 530 aa11.87□□□□□ -0.51
PKM-221ENST00000568743 SH2B2O14492 632 aaPredicted RBP11.87□□□□□ -0.51
PKM-221ENST00000568743 WDR46O15213 610 aaKnown RBP11.87□□□□□ -0.51
PKM-221ENST00000568743 HSPA1AP0DMV8 641 aaKnown RBP11.87□□□□□ -0.51
PKM-221ENST00000568743 HSPA1BP0DMV9 641 aaKnown RBP11.87□□□□□ -0.51
PKM-221ENST00000568743 OSBPP22059 807 aa11.87□□□□□ -0.51
PKM-221ENST00000568743 PSMA5P28066 241 aa11.87□□□□□ -0.51
PKM-221ENST00000568743 USP17L24Q0WX57 530 aa11.87□□□□□ -0.51
PKM-221ENST00000568743 CCDC96Q2M329 555 aa11.87□□□□□ -0.51
PKM-221ENST00000568743 CATSPERGQ6ZRH7 1159 aa11.87□□□□□ -0.51
PKM-221ENST00000568743 DHX32Q7L7V1 743 aaKnown RBP11.87□□□□□ -0.51
PKM-221ENST00000568743 PNMA1Q8ND90 353 aa11.87□□□□□ -0.51
PKM-221ENST00000568743 GMCL1P1Q8NEA9 526 aa11.87□□□□□ -0.51
PKM-221ENST00000568743 ANKS1AQ92625 1134 aa11.87□□□□□ -0.51
PKM-221ENST00000568743 P2RX7Q99572 595 aaKnown RBP11.87□□□□□ -0.51
PKM-221ENST00000568743 LY9Q9HBG7 655 aa11.87□□□□□ -0.51
PKM-221ENST00000568743 FBXO28Q9NVF7 368 aa11.87□□□□□ -0.51
PKM-221ENST00000568743 FRMPD2Q68DX3 1309 aaPredicted RBP11.86□□□□□ -0.51
PKM-221ENST00000568743 FOXN1O15353 648 aa11.86□□□□□ -0.51
PKM-221ENST00000568743 CA12O43570 354 aa11.86□□□□□ -0.51
PKM-221ENST00000568743 PEX10O60683 326 aa11.86□□□□□ -0.51
PKM-221ENST00000568743 ALDH1A1P00352 501 aa11.86□□□□□ -0.51
PKM-221ENST00000568743 HMGB1P09429 215 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms