RNA–Protein interactions for RNA: ENST00000566779.1

GTF3C1-206, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-206ENST00000566779 TDO2P48775 406 aa12.13□□□□□ -0.47
GTF3C1-206ENST00000566779 FLT3LGP49771 235 aa12.13□□□□□ -0.47
GTF3C1-206ENST00000566779 HERVK_113P62684 666 aa12.13□□□□□ -0.47
GTF3C1-206ENST00000566779 FAM110CQ1W6H9 321 aa12.13□□□□□ -0.47
GTF3C1-206ENST00000566779 SH3D19Q5HYK7 790 aa12.13□□□□□ -0.47
GTF3C1-206ENST00000566779 EXOC6Q8TAG9 804 aa12.13□□□□□ -0.47
GTF3C1-206ENST00000566779 APPBP2Q92624 585 aa12.13□□□□□ -0.47
GTF3C1-206ENST00000566779 TANGO6Q9C0B7 1094 aa12.13□□□□□ -0.47
GTF3C1-206ENST00000566779 EMILIN3Q9NT22 766 aa12.13□□□□□ -0.47
GTF3C1-206ENST00000566779 ATP8A2Q9NTI2 1148 aa12.13□□□□□ -0.47
GTF3C1-206ENST00000566779 GINM1Q9NU53 330 aa12.13□□□□□ -0.47
GTF3C1-206ENST00000566779 GREB1LQ9C091 1923 aaPredicted RBP12.12□□□□□ -0.47
GTF3C1-206ENST00000566779 GPAA1O43292 621 aa12.12□□□□□ -0.47
GTF3C1-206ENST00000566779 ADCY3O60266 1144 aa12.12□□□□□ -0.47
GTF3C1-206ENST00000566779 GLRX3O76003 335 aaKnown RBP12.12□□□□□ -0.47
GTF3C1-206ENST00000566779 VCAM1P19320 739 aa12.12□□□□□ -0.47
GTF3C1-206ENST00000566779 ICA1Q05084 483 aa12.12□□□□□ -0.47
GTF3C1-206ENST00000566779 MTFR1Q15390 333 aa12.12□□□□□ -0.47
GTF3C1-206ENST00000566779 SMYD5Q6GMV2 418 aa12.12□□□□□ -0.47
GTF3C1-206ENST00000566779 P2RX7Q99572 595 aaKnown RBP12.12□□□□□ -0.47
GTF3C1-206ENST00000566779 LNPKQ9C0E8 428 aa12.12□□□□□ -0.47
GTF3C1-206ENST00000566779 SUPT16HQ9Y5B9 1047 aaKnown RBP12.12□□□□□ -0.47
GTF3C1-206ENST00000566779 GUCY1A2P33402 732 aa12.11□□□□□ -0.47
GTF3C1-206ENST00000566779 CDK8P49336 464 aa12.11□□□□□ -0.47
GTF3C1-206ENST00000566779 USP14P54578 494 aa12.11□□□□□ -0.47
GTF3C1-206ENST00000566779 UBXN2AP68543 259 aa12.11□□□□□ -0.47
GTF3C1-206ENST00000566779 GABPAQ06546 454 aa12.11□□□□□ -0.47
GTF3C1-206ENST00000566779 LRRFIP1Q32MZ4 808 aaKnown RBP12.11□□□□□ -0.47
GTF3C1-206ENST00000566779 CTR9Q6PD62 1173 aa12.11□□□□□ -0.47
GTF3C1-206ENST00000566779 TMEM179Q6ZVK1 233 aa12.11□□□□□ -0.47
GTF3C1-206ENST00000566779 SPICE1Q8N0Z3 855 aa12.11□□□□□ -0.47
GTF3C1-206ENST00000566779 PI4K2BQ8TCG2 481 aa12.11□□□□□ -0.47
GTF3C1-206ENST00000566779 OSBP2Q969R2 916 aa12.11□□□□□ -0.47
GTF3C1-206ENST00000566779 STRBPQ96SI9 672 aaKnown RBP12.11□□□□□ -0.47
GTF3C1-206ENST00000566779 RNF208Q9H0X6 261 aa12.11□□□□□ -0.47
GTF3C1-206ENST00000566779 RPAP3Q9H6T3 665 aaPredicted RBP12.11□□□□□ -0.47
GTF3C1-206ENST00000566779 ARHGEF10LQ9HCE6 1279 aa12.11□□□□□ -0.47
GTF3C1-206ENST00000566779 TXNRD2Q9NNW7 524 aa12.11□□□□□ -0.47
GTF3C1-206ENST00000566779 BMP2KQ9NSY1 1161 aaPredicted RBP12.11□□□□□ -0.47
GTF3C1-206ENST00000566779 ARPP21Q9UBL0 812 aaPredicted RBP12.11□□□□□ -0.47
GTF3C1-206ENST00000566779 SWAP70Q9UH65 585 aa12.11□□□□□ -0.47
GTF3C1-206ENST00000566779 RLFQ13129 1914 aa12.11□□□□□ -0.47
GTF3C1-206ENST00000566779 A0A0G2JMZ2 1700 aa12.11□□□□□ -0.47
GTF3C1-206ENST00000566779 ZNFX1Q9P2E3 1918 aaKnown RBP12.1□□□□□ -0.47
GTF3C1-206ENST00000566779 FRMPD3Q5JV73 1810 aa12.1□□□□□ -0.47
GTF3C1-206ENST00000566779 USP17L15C9J2P7 530 aa12.1□□□□□ -0.47
GTF3C1-206ENST00000566779 USP17L13C9JLJ4 530 aa12.1□□□□□ -0.47
GTF3C1-206ENST00000566779 USP17L11C9JVI0 530 aa12.1□□□□□ -0.47
GTF3C1-206ENST00000566779 USP17L18D6R9N7 530 aa12.1□□□□□ -0.47
GTF3C1-206ENST00000566779 USP17L22D6RA61 530 aa12.1□□□□□ -0.47
GTF3C1-206ENST00000566779 USP17L17D6RBQ6 530 aa12.1□□□□□ -0.47
GTF3C1-206ENST00000566779 USP17L19D6RCP7 530 aa12.1□□□□□ -0.47
GTF3C1-206ENST00000566779 USP17L20D6RJB6 530 aa12.1□□□□□ -0.47
GTF3C1-206ENST00000566779 INHAP05111 366 aa12.1□□□□□ -0.47
GTF3C1-206ENST00000566779 ZFYP08048 801 aaPredicted RBP12.1□□□□□ -0.47
GTF3C1-206ENST00000566779 CCL5P13501 91 aa12.1□□□□□ -0.47
GTF3C1-206ENST00000566779 CYP2B6P20813 491 aa12.1□□□□□ -0.47
GTF3C1-206ENST00000566779 USP17L24Q0WX57 530 aa12.1□□□□□ -0.47
GTF3C1-206ENST00000566779 C12orf60Q5U649 245 aa12.1□□□□□ -0.47
GTF3C1-206ENST00000566779 CCDC129Q6ZRS4 1044 aa12.1□□□□□ -0.47
GTF3C1-206ENST00000566779 SLAIN1Q8ND83 568 aa12.1□□□□□ -0.47
GTF3C1-206ENST00000566779 GPRC5AQ8NFJ5 357 aa12.1□□□□□ -0.47
GTF3C1-206ENST00000566779 GCC1Q96CN9 775 aa12.1□□□□□ -0.47
GTF3C1-206ENST00000566779 SEC62Q99442 399 aaKnown RBP12.1□□□□□ -0.47
GTF3C1-206ENST00000566779 UNC93B1Q9H1C4 597 aa12.1□□□□□ -0.47
GTF3C1-206ENST00000566779 ISY1Q9ULR0 285 aaKnown RBP12.1□□□□□ -0.47
GTF3C1-206ENST00000566779 HTTP42858 3142 aa12.09□□□□□ -0.47
GTF3C1-206ENST00000566779 PLXNA1Q9UIW2 1896 aa12.09□□□□□ -0.47
GTF3C1-206ENST00000566779 TRIM6-TRIM34B2RNG4 842 aa12.09□□□□□ -0.47
GTF3C1-206ENST00000566779 PRDM1O75626 825 aa12.09□□□□□ -0.47
GTF3C1-206ENST00000566779 ERVK-9P63128 1117 aa12.09□□□□□ -0.47
GTF3C1-206ENST00000566779 ERVK-24P63145 666 aa12.09□□□□□ -0.47
GTF3C1-206ENST00000566779 HDAC1Q13547 482 aaPredicted RBP12.09□□□□□ -0.47
GTF3C1-206ENST00000566779 C16orf86Q6ZW13 317 aa12.09□□□□□ -0.47
GTF3C1-206ENST00000566779 KIAA1683Q9H0B3 1180 aa12.09□□□□□ -0.47
GTF3C1-206ENST00000566779 RWDD1Q9H446 243 aaPredicted RBP12.09□□□□□ -0.47
GTF3C1-206ENST00000566779 MKNK2Q9HBH9 465 aa12.09□□□□□ -0.47
GTF3C1-206ENST00000566779 EPB41L4AQ9HCS5 686 aaPredicted RBP12.09□□□□□ -0.47
GTF3C1-206ENST00000566779 TNRC18O15417 2968 aaPredicted RBP12.08□□□□□ -0.48
GTF3C1-206ENST00000566779 A0A1W2PRG0 241 aa12.08□□□□□ -0.48
GTF3C1-206ENST00000566779 GSG1L2A8MUP6 293 aa12.08□□□□□ -0.48
GTF3C1-206ENST00000566779 HOXA7P31268 230 aaPredicted RBP12.08□□□□□ -0.48
GTF3C1-206ENST00000566779 PLS1Q14651 629 aa12.08□□□□□ -0.48
GTF3C1-206ENST00000566779 RILPL2Q969X0 211 aa12.08□□□□□ -0.48
GTF3C1-206ENST00000566779 CHMP4CQ96CF2 233 aa12.08□□□□□ -0.48
GTF3C1-206ENST00000566779 C12orf42Q96LP6 360 aa12.08□□□□□ -0.48
GTF3C1-206ENST00000566779 NACAP1Q9BZK3 213 aa12.08□□□□□ -0.48
GTF3C1-206ENST00000566779 NAPBQ9H115 298 aa12.08□□□□□ -0.48
GTF3C1-206ENST00000566779 PORCNQ9H237 461 aa12.08□□□□□ -0.48
GTF3C1-206ENST00000566779 SH2D4AQ9H788 454 aa12.08□□□□□ -0.48
GTF3C1-206ENST00000566779 GPHNQ9NQX3 736 aaPredicted RBP12.08□□□□□ -0.48
GTF3C1-206ENST00000566779 FLOT1O75955 427 aa12.07□□□□□ -0.48
GTF3C1-206ENST00000566779 GNAT2P19087 354 aa12.07□□□□□ -0.48
GTF3C1-206ENST00000566779 PDE1AP54750 535 aa12.07□□□□□ -0.48
GTF3C1-206ENST00000566779 PPP1R15BQ5SWA1 713 aa12.07□□□□□ -0.48
GTF3C1-206ENST00000566779 CATSPERGQ6ZRH7 1159 aa12.07□□□□□ -0.48
GTF3C1-206ENST00000566779 GTF3C2Q8WUA4 911 aaPredicted RBP12.07□□□□□ -0.48
GTF3C1-206ENST00000566779 RBPJLQ9UBG7 517 aa12.07□□□□□ -0.48
GTF3C1-206ENST00000566779 MORF4L1Q9UBU8 362 aa12.07□□□□□ -0.48
GTF3C1-206ENST00000566779 ALPK3Q96L96 1907 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms