RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 REM2Q8IYK8 340 aaPredicted RBP14.82□□□□□ -0.04
SF3B3-206ENST00000565990 DNAJC5GQ8N7S2 189 aa14.82□□□□□ -0.04
SF3B3-206ENST00000565990 GMCL1P1Q8NEA9 526 aa14.82□□□□□ -0.04
SF3B3-206ENST00000565990 CAPNS2Q96L46 248 aa14.82□□□□□ -0.04
SF3B3-206ENST00000565990 C12orf42Q96LP6 360 aa14.82□□□□□ -0.04
SF3B3-206ENST00000565990 UBAC1Q9BSL1 405 aa14.82□□□□□ -0.04
SF3B3-206ENST00000565990 EMILIN3Q9NT22 766 aa14.82□□□□□ -0.04
SF3B3-206ENST00000565990 TNKSO95271 1327 aa14.82□□□□□ -0.04
SF3B3-206ENST00000565990 MANSC4A6NHS7 340 aaPredicted RBP14.81□□□□□ -0.04
SF3B3-206ENST00000565990 TRIM75PA6NK02 468 aa14.81□□□□□ -0.04
SF3B3-206ENST00000565990 TOP1P11387 765 aaKnown RBP14.81□□□□□ -0.04
SF3B3-206ENST00000565990 CPA1P15085 419 aa14.81□□□□□ -0.04
SF3B3-206ENST00000565990 CASTP20810 708 aaKnown RBP14.81□□□□□ -0.04
SF3B3-206ENST00000565990 MAP2K2P36507 400 aa14.81□□□□□ -0.04
SF3B3-206ENST00000565990 VEGFBP49765 207 aa14.81□□□□□ -0.04
SF3B3-206ENST00000565990 USP14P54578 494 aa14.81□□□□□ -0.04
SF3B3-206ENST00000565990 EVCP57679 992 aa14.81□□□□□ -0.04
SF3B3-206ENST00000565990 SNAPC2Q13487 334 aa14.81□□□□□ -0.04
SF3B3-206ENST00000565990 SART3Q15020 963 aaKnown RBP14.81□□□□□ -0.04
SF3B3-206ENST00000565990 USP17L2Q6R6M4 530 aa14.81□□□□□ -0.04
SF3B3-206ENST00000565990 SH2D4AQ9H788 454 aa14.81□□□□□ -0.04
SF3B3-206ENST00000565990 VCPKMTQ9H867 229 aa14.81□□□□□ -0.04
SF3B3-206ENST00000565990 LY9Q9HBG7 655 aa14.81□□□□□ -0.04
SF3B3-206ENST00000565990 STX8Q9UNK0 236 aa14.81□□□□□ -0.04
SF3B3-206ENST00000565990 CYP46A1Q9Y6A2 500 aa14.81□□□□□ -0.04
SF3B3-206ENST00000565990 WDR33Q9C0J8 1336 aaKnown RBP14.81□□□□□ -0.04
SF3B3-206ENST00000565990 LOC285556D6RIA3 1793 aa14.8□□□□□ -0.04
SF3B3-206ENST00000565990 F5H6K3 240 aa14.8□□□□□ -0.04
SF3B3-206ENST00000565990 SH2B2O14492 632 aaPredicted RBP14.8□□□□□ -0.04
SF3B3-206ENST00000565990 IFIT3O14879 490 aaKnown RBP14.8□□□□□ -0.04
SF3B3-206ENST00000565990 CETPP11597 493 aa14.8□□□□□ -0.04
SF3B3-206ENST00000565990 KLRC3Q07444 240 aa14.8□□□□□ -0.04
SF3B3-206ENST00000565990 NOGQ13253 232 aa14.8□□□□□ -0.04
SF3B3-206ENST00000565990 MTMR2Q13614 643 aa14.8□□□□□ -0.04
SF3B3-206ENST00000565990 GSE1Q14687 1217 aa14.8□□□□□ -0.04
SF3B3-206ENST00000565990 KIAA1755Q5JYT7 1200 aa14.8□□□□□ -0.04
SF3B3-206ENST00000565990 FASTKD5Q7L8L6 764 aaKnown RBP14.8□□□□□ -0.04
SF3B3-206ENST00000565990 SGMS1Q86VZ5 419 aa14.8□□□□□ -0.04
SF3B3-206ENST00000565990 PROCA1Q8NCQ7 364 aaPredicted RBP14.8□□□□□ -0.04
SF3B3-206ENST00000565990 PTPN18Q99952 460 aa14.8□□□□□ -0.04
SF3B3-206ENST00000565990 SENP2Q9HC62 589 aa14.8□□□□□ -0.04
SF3B3-206ENST00000565990 KIF23Q02241 960 aaPredicted RBP14.79□□□□□ -0.04
SF3B3-206ENST00000565990 WTAPQ15007 396 aa14.79□□□□□ -0.04
SF3B3-206ENST00000565990 TMEM67Q5HYA8 995 aa14.79□□□□□ -0.04
SF3B3-206ENST00000565990 GPAT2Q6NUI2 795 aa14.79□□□□□ -0.04
SF3B3-206ENST00000565990 LPAR1Q92633 364 aa14.79□□□□□ -0.04
SF3B3-206ENST00000565990 ZIC5Q96T25 663 aa14.79□□□□□ -0.04
SF3B3-206ENST00000565990 GPHNQ9NQX3 736 aaPredicted RBP14.79□□□□□ -0.04
SF3B3-206ENST00000565990 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.79□□□□□ -0.04
SF3B3-206ENST00000565990 RLFQ13129 1914 aa14.78□□□□□ -0.04
SF3B3-206ENST00000565990 ERICH2A1L162 156 aa14.78□□□□□ -0.04
SF3B3-206ENST00000565990 SNHG28P0DPA3 235 aa14.78□□□□□ -0.04
SF3B3-206ENST00000565990 HOXA7P31268 230 aaPredicted RBP14.78□□□□□ -0.04
SF3B3-206ENST00000565990 HMGCS2P54868 508 aa14.78□□□□□ -0.04
SF3B3-206ENST00000565990 TROAPQ12815 778 aa14.78□□□□□ -0.04
SF3B3-206ENST00000565990 MKRN3Q13064 507 aaKnown RBP14.78□□□□□ -0.04
SF3B3-206ENST00000565990 IFIT1BQ5T764 474 aaKnown RBP14.78□□□□□ -0.04
SF3B3-206ENST00000565990 Q6ZUG5 572 aa14.78□□□□□ -0.04
SF3B3-206ENST00000565990 BRI3BPQ8WY22 251 aa14.78□□□□□ -0.04
SF3B3-206ENST00000565990 TCEANC2Q96MN5 208 aa14.78□□□□□ -0.04
SF3B3-206ENST00000565990 MAP3K14Q99558 947 aa14.78□□□□□ -0.04
SF3B3-206ENST00000565990 LRRC2Q9BYS8 371 aa14.78□□□□□ -0.04
SF3B3-206ENST00000565990 UPF3BQ9BZI7 483 aaKnown RBP14.78□□□□□ -0.04
SF3B3-206ENST00000565990 GOPCQ9HD26 462 aa14.78□□□□□ -0.04
SF3B3-206ENST00000565990 ZCCHC17Q9NP64 241 aaKnown RBP14.78□□□□□ -0.04
SF3B3-206ENST00000565990 SLC45A1Q9Y2W3 748 aa14.78□□□□□ -0.04
SF3B3-206ENST00000565990 AOC2O75106 756 aa14.77□□□□□ -0.05
SF3B3-206ENST00000565990 NDUFB10O96000 172 aa14.77□□□□□ -0.05
SF3B3-206ENST00000565990 NEK4P51957 841 aa14.77□□□□□ -0.05
SF3B3-206ENST00000565990 ATP2B2Q01814 1243 aa14.77□□□□□ -0.05
SF3B3-206ENST00000565990 TOB2Q14106 344 aaPredicted RBP14.77□□□□□ -0.05
SF3B3-206ENST00000565990 SLFN13Q68D06 897 aa14.77□□□□□ -0.05
SF3B3-206ENST00000565990 CATSPERGQ6ZRH7 1159 aa14.77□□□□□ -0.05
SF3B3-206ENST00000565990 ANKRD23Q86SG2 305 aa14.77□□□□□ -0.05
SF3B3-206ENST00000565990 PNMA1Q8ND90 353 aa14.77□□□□□ -0.05
SF3B3-206ENST00000565990 GMCL1Q96IK5 515 aa14.77□□□□□ -0.05
SF3B3-206ENST00000565990 FEZ1Q99689 392 aa14.77□□□□□ -0.05
SF3B3-206ENST00000565990 KAT14Q9H8E8 782 aa14.77□□□□□ -0.05
SF3B3-206ENST00000565990 PDRG1Q9NUG6 133 aa14.77□□□□□ -0.05
SF3B3-206ENST00000565990 TMOD4Q9NZQ9 345 aa14.77□□□□□ -0.05
SF3B3-206ENST00000565990 AGTPBP1Q9UPW5 1226 aa14.77□□□□□ -0.05
SF3B3-206ENST00000565990 PARP14Q460N5 1801 aa14.77□□□□□ -0.05
SF3B3-206ENST00000565990 THSD7BQ9C0I4 1608 aa14.77□□□□□ -0.05
SF3B3-206ENST00000565990 CCL15-CCL14A0A0B4J2E2 113 aa14.76□□□□□ -0.05
SF3B3-206ENST00000565990 BTBD19C9JJ37 291 aa14.76□□□□□ -0.05
SF3B3-206ENST00000565990 SREBF2Q12772 1141 aa14.76□□□□□ -0.05
SF3B3-206ENST00000565990 DGKZQ13574 1117 aa14.76□□□□□ -0.05
SF3B3-206ENST00000565990 RABEP1Q15276 862 aa14.76□□□□□ -0.05
SF3B3-206ENST00000565990 CCL15Q16663 113 aa14.76□□□□□ -0.05
SF3B3-206ENST00000565990 PAXIP1Q6ZW49 1069 aaPredicted RBP14.76□□□□□ -0.05
SF3B3-206ENST00000565990 IFNL1Q8IU54 200 aa14.76□□□□□ -0.05
SF3B3-206ENST00000565990 LRRC47Q8N1G4 583 aaKnown RBP14.76□□□□□ -0.05
SF3B3-206ENST00000565990 DCAF4Q8WV16 495 aa14.76□□□□□ -0.05
SF3B3-206ENST00000565990 BRPF3Q9ULD4 1205 aa14.76□□□□□ -0.05
SF3B3-206ENST00000565990 WDR46O15213 610 aaKnown RBP14.75□□□□□ -0.05
SF3B3-206ENST00000565990 PLA2G6O60733 806 aa14.75□□□□□ -0.05
SF3B3-206ENST00000565990 PDHBP11177 359 aa14.75□□□□□ -0.05
SF3B3-206ENST00000565990 VCAM1P19320 739 aa14.75□□□□□ -0.05
SF3B3-206ENST00000565990 ZYXQ15942 572 aaKnown RBP14.75□□□□□ -0.05
SF3B3-206ENST00000565990 TREML2Q5T2D2 321 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms