RNA–Protein interactions for RNA: ENST00000565803.1

CHD9-216, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 3,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-216ENST00000565803 FGRP09769 529 aa3.58□□□□□ -1.84
CHD9-216ENST00000565803 TSPY4P0CV99 314 aa3.58□□□□□ -1.84
CHD9-216ENST00000565803 TSPY10P0CW01 314 aa3.58□□□□□ -1.84
CHD9-216ENST00000565803 KIF5BP33176 963 aa3.58□□□□□ -1.84
CHD9-216ENST00000565803 PEX19P40855 299 aa3.58□□□□□ -1.84
CHD9-216ENST00000565803 RGS3P49796 1198 aa3.58□□□□□ -1.84
CHD9-216ENST00000565803 FXR1P51114 621 aaKnown RBP eCLIP3.58□□□□□ -1.84
CHD9-216ENST00000565803 EHHADHQ08426 723 aa3.58□□□□□ -1.84
CHD9-216ENST00000565803 PTK7Q13308 1070 aa3.58□□□□□ -1.84
CHD9-216ENST00000565803 OXLD1Q5BKU9 147 aa3.58□□□□□ -1.84
CHD9-216ENST00000565803 DALRD3Q5D0E6 543 aaKnown RBP3.58□□□□□ -1.84
CHD9-216ENST00000565803 AGAP9Q5VTM2 703 aa3.58□□□□□ -1.84
CHD9-216ENST00000565803 OR8H2Q8N162 312 aa3.58□□□□□ -1.84
CHD9-216ENST00000565803 ZNF713Q8N859 430 aaPredicted RBP3.58□□□□□ -1.84
CHD9-216ENST00000565803 MARVELD3Q96A59 401 aa3.58□□□□□ -1.84
CHD9-216ENST00000565803 HHIPL1Q96JK4 782 aa3.58□□□□□ -1.84
CHD9-216ENST00000565803 CCDC8Q9H0W5 538 aaPredicted RBP3.58□□□□□ -1.84
CHD9-216ENST00000565803 ZBTB3Q9H5J0 574 aa3.58□□□□□ -1.84
CHD9-216ENST00000565803 C12orf49Q9H741 205 aa3.58□□□□□ -1.84
CHD9-216ENST00000565803 RIC8AQ9NPQ8 531 aa3.58□□□□□ -1.84
CHD9-216ENST00000565803 DMTF1Q9Y222 760 aa3.58□□□□□ -1.84
CHD9-216ENST00000565803 ECEL1O95672 775 aa3.57□□□□□ -1.84
CHD9-216ENST00000565803 CCND1P24385 295 aa3.57□□□□□ -1.84
CHD9-216ENST00000565803 ASIC2Q16515 512 aa3.57□□□□□ -1.84
CHD9-216ENST00000565803 POTEGQ6S5H5 508 aa3.57□□□□□ -1.84
CHD9-216ENST00000565803 C16orf86Q6ZW13 317 aa3.57□□□□□ -1.84
CHD9-216ENST00000565803 ANKRD23Q86SG2 305 aa3.57□□□□□ -1.84
CHD9-216ENST00000565803 RASSF3Q86WH2 238 aa3.57□□□□□ -1.84
CHD9-216ENST00000565803 TTC16Q8NEE8 873 aa3.57□□□□□ -1.84
CHD9-216ENST00000565803 N4BP2L2Q92802 583 aaPredicted RBP3.57□□□□□ -1.84
CHD9-216ENST00000565803 RELTQ969Z4 430 aa3.57□□□□□ -1.84
CHD9-216ENST00000565803 C22orf23Q9BZE7 217 aa3.57□□□□□ -1.84
CHD9-216ENST00000565803 TMX1Q9H3N1 280 aa3.57□□□□□ -1.84
CHD9-216ENST00000565803 RETREG1Q9H6L5 497 aa3.57□□□□□ -1.84
CHD9-216ENST00000565803 RRP15Q9Y3B9 282 aaKnown RBP3.57□□□□□ -1.84
CHD9-216ENST00000565803 KCPQ6ZWJ8 1503 aa3.57□□□□□ -1.84
CHD9-216ENST00000565803 CCDC7Q96M83 1385 aa3.57□□□□□ -1.84
CHD9-216ENST00000565803 KDM2BQ8NHM5 1336 aa3.57□□□□□ -1.84
CHD9-216ENST00000565803 ATP5J2-PTCD1G3V325 749 aa3.57□□□□□ -1.84
CHD9-216ENST00000565803 ZBTB24O43167 697 aaPredicted RBP3.57□□□□□ -1.84
CHD9-216ENST00000565803 PRPF3O43395 683 aaKnown RBP3.57□□□□□ -1.84
CHD9-216ENST00000565803 IFIT1P09914 478 aaKnown RBP3.57□□□□□ -1.84
CHD9-216ENST00000565803 NAT1P18440 290 aa3.57□□□□□ -1.84
CHD9-216ENST00000565803 MPSTP25325 297 aa3.57□□□□□ -1.84
CHD9-216ENST00000565803 HPDP32754 393 aaPredicted RBP3.57□□□□□ -1.84
CHD9-216ENST00000565803 ARHGAP29Q52LW3 1261 aa3.57□□□□□ -1.84
CHD9-216ENST00000565803 COBLL1Q53SF7 1204 aa3.57□□□□□ -1.84
CHD9-216ENST00000565803 FAM133BQ5BKY9 247 aaKnown RBP3.57□□□□□ -1.84
CHD9-216ENST00000565803 CNNM4Q6P4Q7 775 aa3.57□□□□□ -1.84
CHD9-216ENST00000565803 MCM10Q7L590 875 aa3.57□□□□□ -1.84
CHD9-216ENST00000565803 JARID2Q92833 1246 aaPredicted RBP3.57□□□□□ -1.84
CHD9-216ENST00000565803 YIPF4Q9BSR8 244 aa3.57□□□□□ -1.84
CHD9-216ENST00000565803 SPON2Q9BUD6 331 aa3.57□□□□□ -1.84
CHD9-216ENST00000565803 MKL2Q9ULH7 1088 aa3.57□□□□□ -1.84
CHD9-216ENST00000565803 ENPP3O14638 875 aa3.57□□□□□ -1.84
CHD9-216ENST00000565803 CLK1P49759 484 aaKnown RBP3.57□□□□□ -1.84
CHD9-216ENST00000565803 ARHGAP4P98171 946 aa3.57□□□□□ -1.84
CHD9-216ENST00000565803 NR1H3Q13133 447 aa3.57□□□□□ -1.84
CHD9-216ENST00000565803 NFE2Q16621 373 aaPredicted RBP3.57□□□□□ -1.84
CHD9-216ENST00000565803 ESCO1Q5FWF5 840 aa3.57□□□□□ -1.84
CHD9-216ENST00000565803 ARSHQ5FYA8 562 aa3.57□□□□□ -1.84
CHD9-216ENST00000565803 FAM83BQ5T0W9 1011 aa3.57□□□□□ -1.84
CHD9-216ENST00000565803 LDLRAD1Q5T700 205 aa3.57□□□□□ -1.84
CHD9-216ENST00000565803 CCDC81Q6ZN84 652 aa3.57□□□□□ -1.84
CHD9-216ENST00000565803 TMC4Q7Z404 712 aa3.57□□□□□ -1.84
CHD9-216ENST00000565803 NLGN2Q8NFZ4 835 aa3.57□□□□□ -1.84
CHD9-216ENST00000565803 LEO1Q8WVC0 666 aaPredicted RBP3.57□□□□□ -1.84
CHD9-216ENST00000565803 GMLQ99445 158 aa3.57□□□□□ -1.84
CHD9-216ENST00000565803 TMEM63CQ9P1W3 806 aa3.57□□□□□ -1.84
CHD9-216ENST00000565803 SAP30BPQ9UHR5 308 aaKnown RBP3.57□□□□□ -1.84
CHD9-216ENST00000565803 CHIC2Q9UKJ5 165 aa3.57□□□□□ -1.84
CHD9-216ENST00000565803 AXIN2Q9Y2T1 843 aa3.57□□□□□ -1.84
CHD9-216ENST00000565803 V9GY48 417 aaPredicted RBP3.57□□□□□ -1.84
CHD9-216ENST00000565803 COL2A1P02458 1487 aaPredicted RBP3.57□□□□□ -1.84
CHD9-216ENST00000565803 DUOX1Q9NRD9 1551 aa3.56□□□□□ -1.84
CHD9-216ENST00000565803 FDX1P10109 184 aa3.56□□□□□ -1.84
CHD9-216ENST00000565803 MYBP10242 640 aa3.56□□□□□ -1.84
CHD9-216ENST00000565803 CTNNA1P35221 906 aaKnown RBP3.56□□□□□ -1.84
CHD9-216ENST00000565803 PLIN5Q00G26 463 aa3.56□□□□□ -1.84
CHD9-216ENST00000565803 G3BP1Q13283 466 aaKnown RBP eCLIP3.56□□□□□ -1.84
CHD9-216ENST00000565803 ELOAQ14241 798 aaKnown RBP3.56□□□□□ -1.84
CHD9-216ENST00000565803 ZKSCAN8Q15776 578 aaPredicted RBP3.56□□□□□ -1.84
CHD9-216ENST00000565803 TJAP1Q5JTD0 557 aa3.56□□□□□ -1.84
CHD9-216ENST00000565803 GJC2Q5T442 439 aaPredicted RBP3.56□□□□□ -1.84
CHD9-216ENST00000565803 ACBD5Q5T8D3 534 aaPredicted RBP3.56□□□□□ -1.84
CHD9-216ENST00000565803 NBPF10Q6P3W6 841 aaKnown RBP3.56□□□□□ -1.84
CHD9-216ENST00000565803 DSTYKQ6XUX3 929 aa3.56□□□□□ -1.84
CHD9-216ENST00000565803 SAMD7Q7Z3H4 446 aa3.56□□□□□ -1.84
CHD9-216ENST00000565803 KRT28Q7Z3Y7 464 aa3.56□□□□□ -1.84
CHD9-216ENST00000565803 DZIP1Q86YF9 867 aaKnown RBP3.56□□□□□ -1.84
CHD9-216ENST00000565803 FBF1Q8TES7 1133 aa3.56□□□□□ -1.84
CHD9-216ENST00000565803 CENPTQ96BT3 561 aa3.56□□□□□ -1.84
CHD9-216ENST00000565803 TMEM87BQ96K49 555 aa3.56□□□□□ -1.84
CHD9-216ENST00000565803 GRPEL1Q9HAV7 217 aa3.56□□□□□ -1.84
CHD9-216ENST00000565803 TYW1Q9NV66 732 aaKnown RBP3.56□□□□□ -1.84
CHD9-216ENST00000565803 ZNHIT6Q9NWK9 470 aaKnown RBP3.56□□□□□ -1.84
CHD9-216ENST00000565803 FBXL5Q9UKA1 691 aa3.56□□□□□ -1.84
CHD9-216ENST00000565803 MON2Q7Z3U7 1717 aa3.56□□□□□ -1.84
CHD9-216ENST00000565803 SCN11AQ9UI33 1791 aa3.56□□□□□ -1.84
CHD9-216ENST00000565803 IGHDP01880 384 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms