RNA–Protein interactions for RNA: ENST00000564814.1

GINS3-205, Transcript of GINS complex subunit 3, humanhuman

TSL 4

Gene GINS3, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-205ENST00000564814 GTF3C6Q969F1 213 aa8.76□□□□□ -1.01
GINS3-205ENST00000564814 GMCL1Q96IK5 515 aa8.76□□□□□ -1.01
GINS3-205ENST00000564814 TMEM47Q9BQJ4 181 aa8.76□□□□□ -1.01
GINS3-205ENST00000564814 GLIS2Q9BZE0 524 aaPredicted RBP8.76□□□□□ -1.01
GINS3-205ENST00000564814 SH2D4AQ9H788 454 aa8.76□□□□□ -1.01
GINS3-205ENST00000564814 RBM28Q9NW13 759 aaKnown RBP8.76□□□□□ -1.01
GINS3-205ENST00000564814 BRPF3Q9ULD4 1205 aa8.76□□□□□ -1.01
GINS3-205ENST00000564814 HPS5Q9UPZ3 1129 aa8.76□□□□□ -1.01
GINS3-205ENST00000564814 SLC12A7Q9Y666 1083 aa8.76□□□□□ -1.01
GINS3-205ENST00000564814 PARP14Q460N5 1801 aa8.75□□□□□ -1.01
GINS3-205ENST00000564814 CCDC69A6NI79 296 aa8.75□□□□□ -1.01
GINS3-205ENST00000564814 SPDYE5A6NIY4 337 aa8.75□□□□□ -1.01
GINS3-205ENST00000564814 FAM196BA6NMK8 535 aa8.75□□□□□ -1.01
GINS3-205ENST00000564814 USP17L5A8MUK1 530 aa8.75□□□□□ -1.01
GINS3-205ENST00000564814 C19orf81C9J6K1 198 aa8.75□□□□□ -1.01
GINS3-205ENST00000564814 FOXN1O15353 648 aa8.75□□□□□ -1.01
GINS3-205ENST00000564814 ZBTB43O43298 467 aa8.75□□□□□ -1.01
GINS3-205ENST00000564814 IFNAR1P17181 557 aa8.75□□□□□ -1.01
GINS3-205ENST00000564814 PTPRAP18433 802 aa8.75□□□□□ -1.01
GINS3-205ENST00000564814 GNAQP50148 359 aa8.75□□□□□ -1.01
GINS3-205ENST00000564814 JAG1P78504 1218 aa8.75□□□□□ -1.01
GINS3-205ENST00000564814 ST3GAL1Q11201 340 aa8.75□□□□□ -1.01
GINS3-205ENST00000564814 SEPT2Q15019 361 aa8.75□□□□□ -1.01
GINS3-205ENST00000564814 NTRK3Q16288 839 aa8.75□□□□□ -1.01
GINS3-205ENST00000564814 SLC4A8Q2Y0W8 1093 aa8.75□□□□□ -1.01
GINS3-205ENST00000564814 DEFB115Q30KQ5 88 aa8.75□□□□□ -1.01
GINS3-205ENST00000564814 ASPRV1Q53RT3 343 aa8.75□□□□□ -1.01
GINS3-205ENST00000564814 GPATCH4Q5T3I0 446 aaKnown RBP8.75□□□□□ -1.01
GINS3-205ENST00000564814 SYNE3Q6ZMZ3 975 aa8.75□□□□□ -1.01
GINS3-205ENST00000564814 MIGA2Q7L4E1 593 aa8.75□□□□□ -1.01
GINS3-205ENST00000564814 CHST3Q7LGC8 479 aa8.75□□□□□ -1.01
GINS3-205ENST00000564814 CATIPQ7Z7H3 387 aa8.75□□□□□ -1.01
GINS3-205ENST00000564814 TEX2Q8IWB9 1127 aa8.75□□□□□ -1.01
GINS3-205ENST00000564814 SMARCC2Q8TAQ2 1214 aa8.75□□□□□ -1.01
GINS3-205ENST00000564814 HHIPL1Q96JK4 782 aa8.75□□□□□ -1.01
GINS3-205ENST00000564814 TCEANC2Q96MN5 208 aa8.75□□□□□ -1.01
GINS3-205ENST00000564814 WRNIP1Q96S55 665 aa8.75□□□□□ -1.01
GINS3-205ENST00000564814 LZTS2Q9BRK4 669 aa8.75□□□□□ -1.01
GINS3-205ENST00000564814 SLKQ9H2G2 1235 aaPredicted RBP8.75□□□□□ -1.01
GINS3-205ENST00000564814 KAT14Q9H8E8 782 aa8.75□□□□□ -1.01
GINS3-205ENST00000564814 AS3MTQ9HBK9 375 aa8.75□□□□□ -1.01
GINS3-205ENST00000564814 ARHGEF10LQ9HCE6 1279 aa8.75□□□□□ -1.01
GINS3-205ENST00000564814 FAM217BQ9NTX9 383 aaPredicted RBP8.75□□□□□ -1.01
GINS3-205ENST00000564814 RBM27Q9P2N5 1060 aaKnown RBP8.75□□□□□ -1.01
GINS3-205ENST00000564814 ABT1Q9ULW3 272 aaKnown RBP8.75□□□□□ -1.01
GINS3-205ENST00000564814 SNCAIPQ9Y6H5 919 aa8.75□□□□□ -1.01
GINS3-205ENST00000564814 STK36Q9NRP7 1315 aa8.75□□□□□ -1.01
GINS3-205ENST00000564814 KLF18A0A0U1RQI7 1052 aa8.74□□□□□ -1.01
GINS3-205ENST00000564814 PALM3A6NDB9 673 aaPredicted RBP8.74□□□□□ -1.01
GINS3-205ENST00000564814 CXCL11O14625 94 aa8.74□□□□□ -1.01
GINS3-205ENST00000564814 NMT2O60551 498 aa8.74□□□□□ -1.01
GINS3-205ENST00000564814 GDF11O95390 407 aa8.74□□□□□ -1.01
GINS3-205ENST00000564814 SLURP2P0DP57 97 aa8.74□□□□□ -1.01
GINS3-205ENST00000564814 PDHBP11177 359 aa8.74□□□□□ -1.01
GINS3-205ENST00000564814 EEF2P13639 858 aaKnown RBP8.74□□□□□ -1.01
GINS3-205ENST00000564814 INPP5BP32019 993 aa8.74□□□□□ -1.01
GINS3-205ENST00000564814 KIF5BP33176 963 aa8.74□□□□□ -1.01
GINS3-205ENST00000564814 USP14P54578 494 aa8.74□□□□□ -1.01
GINS3-205ENST00000564814 HMGN5P82970 282 aaKnown RBP8.74□□□□□ -1.01
GINS3-205ENST00000564814 FGD1P98174 961 aa8.74□□□□□ -1.01
GINS3-205ENST00000564814 PPATQ06203 517 aa8.74□□□□□ -1.01
GINS3-205ENST00000564814 APOBRQ0VD83 1088 aa8.74□□□□□ -1.01
GINS3-205ENST00000564814 FUT2Q10981 343 aa8.74□□□□□ -1.01
GINS3-205ENST00000564814 SCRN1Q12765 414 aa8.74□□□□□ -1.01
GINS3-205ENST00000564814 GRM1Q13255 1194 aa8.74□□□□□ -1.01
GINS3-205ENST00000564814 VGLL4Q14135 290 aa8.74□□□□□ -1.01
GINS3-205ENST00000564814 GRM4Q14833 912 aa8.74□□□□□ -1.01
GINS3-205ENST00000564814 BTNL9Q6UXG8 535 aa8.74□□□□□ -1.01
GINS3-205ENST00000564814 PAXIP1Q6ZW49 1069 aaPredicted RBP8.74□□□□□ -1.01
GINS3-205ENST00000564814 ERO1BQ86YB8 467 aa8.74□□□□□ -1.01
GINS3-205ENST00000564814 FANCBQ8NB91 859 aa8.74□□□□□ -1.01
GINS3-205ENST00000564814 DCAF4Q8WV16 495 aa8.74□□□□□ -1.01
GINS3-205ENST00000564814 IPO9Q96P70 1041 aaKnown RBP8.74□□□□□ -1.01
GINS3-205ENST00000564814 SPZ1Q9BXG8 430 aa8.74□□□□□ -1.01
GINS3-205ENST00000564814 LRRC2Q9BYS8 371 aa8.74□□□□□ -1.01
GINS3-205ENST00000564814 VCPKMTQ9H867 229 aa8.74□□□□□ -1.01
GINS3-205ENST00000564814 SENP2Q9HC62 589 aa8.74□□□□□ -1.01
GINS3-205ENST00000564814 GBA2Q9HCG7 927 aaPredicted RBP8.74□□□□□ -1.01
GINS3-205ENST00000564814 CWC22Q9HCG8 908 aaKnown RBP8.74□□□□□ -1.01
GINS3-205ENST00000564814 PRDM10Q9NQV6 1147 aa8.74□□□□□ -1.01
GINS3-205ENST00000564814 GPHNQ9NQX3 736 aaPredicted RBP8.74□□□□□ -1.01
GINS3-205ENST00000564814 STX8Q9UNK0 236 aa8.74□□□□□ -1.01
GINS3-205ENST00000564814 KCNH4Q9UQ05 1017 aa8.74□□□□□ -1.01
GINS3-205ENST00000564814 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.74□□□□□ -1.01
GINS3-205ENST00000564814 RLFQ13129 1914 aa8.74□□□□□ -1.01
GINS3-205ENST00000564814 A0A1W2PRG0 241 aa8.73□□□□□ -1.01
GINS3-205ENST00000564814 GOLGA8BA8MQT2 603 aa8.73□□□□□ -1.01
GINS3-205ENST00000564814 CDKL5O76039 1030 aa8.73□□□□□ -1.01
GINS3-205ENST00000564814 LARGE1O95461 756 aa8.73□□□□□ -1.01
GINS3-205ENST00000564814 DDIT3P35638 169 aa8.73□□□□□ -1.01
GINS3-205ENST00000564814 METAP2P50579 478 aaKnown RBP eCLIP8.73□□□□□ -1.01
GINS3-205ENST00000564814 BACE1P56817 501 aa8.73□□□□□ -1.01
GINS3-205ENST00000564814 ZNF543Q08ER8 600 aa8.73□□□□□ -1.01
GINS3-205ENST00000564814 PPIL2Q13356 520 aa8.73□□□□□ -1.01
GINS3-205ENST00000564814 PRAMEF18Q5VWM3 479 aa8.73□□□□□ -1.01
GINS3-205ENST00000564814 CPLX2Q6PUV4 134 aaKnown RBP8.73□□□□□ -1.01
GINS3-205ENST00000564814 TMTC3Q6ZXV5 915 aa8.73□□□□□ -1.01
GINS3-205ENST00000564814 ZNF280CQ8ND82 737 aa8.73□□□□□ -1.01
GINS3-205ENST00000564814 CTCFLQ8NI51 663 aaPredicted RBP8.73□□□□□ -1.01
GINS3-205ENST00000564814 MTMR8Q96EF0 704 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms